RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 BARD1Q99728 777 aaKnown RBP7.44□□□□□ -1.22
HDAC9-214ENST00000441542 FAM49AQ9H0Q0 323 aaPredicted RBP7.44□□□□□ -1.22
HDAC9-214ENST00000441542 CXCL16Q9H2A7 254 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 KAT8Q9H7Z6 458 aaKnown RBP7.44□□□□□ -1.22
HDAC9-214ENST00000441542 TIGARQ9NQ88 270 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 OPTCQ9UBM4 332 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 PPP2R3BQ9Y5P8 575 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 CENPBD1B2RD01 187 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 E5RI56 91 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 M0R129 80 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 CLDN5O00501 218 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 MDM4O15151 490 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 GABARAPO95166 117 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 ZNF682O95780 498 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 LBPP18428 481 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 EPHA2P29317 976 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 PRDX3P30048 256 aaKnown RBP7.44□□□□□ -1.22
HDAC9-214ENST00000441542 PTGS2P35354 604 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 PIK3CGP48736 1102 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 GHRHRQ02643 423 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 PTPRCAPQ14761 206 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 CDK10Q15131 360 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 CCDC85BQ15834 202 aaPredicted RBP7.44□□□□□ -1.22
HDAC9-214ENST00000441542 PTCHD3Q3KNS1 767 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 TMEM95Q3KNT9 176 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 SGO1Q5FBB7 561 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 SPANXN2Q5MJ10 180 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 LAIR2Q6ISS4 152 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 PAMR1Q6UXH9 720 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 Q6ZPB1 254 aaPredicted RBP7.44□□□□□ -1.22
HDAC9-214ENST00000441542 TMEM179BQ7Z7N9 219 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 OSTM1Q86WC4 334 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 PHACTR4Q8IZ21 702 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 FNDC5Q8NAU1 212 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 BRSK1Q8TDC3 778 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 SLC16A10Q8TF71 515 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 CDCA5Q96FF9 252 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 KIF12Q96FN5 646 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 MED30Q96HR3 178 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 TRNT1Q96Q11 434 aaKnown RBP7.44□□□□□ -1.22
HDAC9-214ENST00000441542 YME1L1Q96TA2 773 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 FSD1LQ9BXM9 530 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 SLIRPQ9GZT3 109 aaKnown RBP7.44□□□□□ -1.22
HDAC9-214ENST00000441542 NARFLQ9H6Q4 476 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 MINDY3Q9H8M7 445 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 PDLIM7Q9NR12 457 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 SCN3BQ9NY72 215 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 TAS2R9Q9NYW1 312 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 ADGRE2Q9UHX3 823 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 FBXO10Q9UK96 956 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 PCDHB14Q9Y5E9 798 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 STYXL1Q9Y6J8 313 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 OAS3Q9Y6K5 1087 aaKnown RBP7.44□□□□□ -1.22
HDAC9-214ENST00000441542 TRIM64A6NGJ6 449 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 H0YAE9 185 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 hCG_2039718K7EN88 272 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 ENPP3O14638 875 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 AZIN1O14977 448 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 MSCO60682 206 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 MED26O95402 600 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 PGRP06401 933 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 SLC10A3P09131 477 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 MMP10P09238 476 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 PIRTP0C851 137 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 YBX3P16989 372 aaKnown RBP eCLIP7.44□□□□□ -1.22
HDAC9-214ENST00000441542 VAMP1P23763 118 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 NPY2RP49146 381 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 TUBA1BP68363 451 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 ADIGQ0VDE8 80 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 BST2Q10589 180 aaKnown RBP7.44□□□□□ -1.22
HDAC9-214ENST00000441542 CDK5R2Q13319 367 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 PON2Q15165 354 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 RBBP7Q16576 425 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 NKG7Q16617 165 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 VARS2Q5ST30 1063 aaKnown RBP7.44□□□□□ -1.22
HDAC9-214ENST00000441542 ZNF544Q6NX49 715 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 CYS1Q717R9 158 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 TUBA1AQ71U36 451 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 NPWQ8N729 165 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 C7orf57Q8NEG2 295 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 OR6F1Q8NGZ6 308 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 CLHC1Q8NHS4 586 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 EDEM1Q92611 657 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 AURKBQ96GD4 344 aaPredicted RBP7.44□□□□□ -1.22
HDAC9-214ENST00000441542 YTHDF1Q9BYJ9 559 aaKnown RBP7.44□□□□□ -1.22
HDAC9-214ENST00000441542 CDT1Q9H211 546 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 OR51E2Q9H255 320 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 GSTO2Q9H4Y5 243 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 ACTR8Q9H981 624 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 SARDHQ9UL12 918 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 KIAA1257Q9ULG3 409 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 PCDHGA10Q9Y5H3 936 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 GMPPBQ9Y5P6 360 aa7.44□□□□□ -1.22
HDAC9-214ENST00000441542 ZFC3H1O60293 1989 aaKnown RBP7.43□□□□□ -1.22
HDAC9-214ENST00000441542 A0A096LPI6 279 aa7.43□□□□□ -1.22
HDAC9-214ENST00000441542 A0A0X1KG70 313 aa7.43□□□□□ -1.22
HDAC9-214ENST00000441542 TCRBV5S2A0A599 114 aa7.43□□□□□ -1.22
HDAC9-214ENST00000441542 AGAP5A6NIR3 686 aa7.43□□□□□ -1.22
HDAC9-214ENST00000441542 SAGE2PA6NJ88 616 aa7.43□□□□□ -1.22
HDAC9-214ENST00000441542 TARM1B6A8C7 271 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms