RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 TRBC1P01850 177 aa13.98□□□□□ -0.17
LIMD1-202ENST00000440097 SRCP12931 536 aa13.98□□□□□ -0.17
LIMD1-202ENST00000440097 MYOGP15173 224 aa13.98□□□□□ -0.17
LIMD1-202ENST00000440097 ARL1P40616 181 aaPredicted RBP13.98□□□□□ -0.17
LIMD1-202ENST00000440097 PSMD7P51665 324 aa13.98□□□□□ -0.17
LIMD1-202ENST00000440097 IL2P60568 153 aa13.98□□□□□ -0.17
LIMD1-202ENST00000440097 FUT11Q495W5 492 aa13.98□□□□□ -0.17
LIMD1-202ENST00000440097 LRRC73Q5JTD7 316 aa13.98□□□□□ -0.17
LIMD1-202ENST00000440097 NCCRP1Q6ZVX7 275 aaPredicted RBP13.98□□□□□ -0.17
LIMD1-202ENST00000440097 CPNE9Q8IYJ1 553 aa13.98□□□□□ -0.17
LIMD1-202ENST00000440097 OSBPL11Q9BXB4 747 aa13.98□□□□□ -0.17
LIMD1-202ENST00000440097 GSTO2Q9H4Y5 243 aa13.98□□□□□ -0.17
LIMD1-202ENST00000440097 TFB2MQ9H5Q4 396 aaKnown RBP13.98□□□□□ -0.17
LIMD1-202ENST00000440097 MED16Q9Y2X0 877 aa13.98□□□□□ -0.17
LIMD1-202ENST00000440097 TRAF6Q9Y4K3 522 aa13.98□□□□□ -0.17
LIMD1-202ENST00000440097 XYLBO75191 536 aa13.97□□□□□ -0.17
LIMD1-202ENST00000440097 GPC4O75487 556 aa13.97□□□□□ -0.17
LIMD1-202ENST00000440097 TYRP14679 529 aa13.97□□□□□ -0.17
LIMD1-202ENST00000440097 PTGER3P43115 390 aa13.97□□□□□ -0.17
LIMD1-202ENST00000440097 METTL3Q86U44 580 aaKnown RBP13.97□□□□□ -0.17
LIMD1-202ENST00000440097 NKAPQ8N5F7 415 aaKnown RBP13.97□□□□□ -0.17
LIMD1-202ENST00000440097 EEF1AKMT1Q8WVE0 214 aa13.97□□□□□ -0.17
LIMD1-202ENST00000440097 ISOC1Q96CN7 298 aa13.97□□□□□ -0.17
LIMD1-202ENST00000440097 FAR2Q96K12 515 aa13.97□□□□□ -0.17
LIMD1-202ENST00000440097 SLC29A1Q99808 456 aa13.97□□□□□ -0.17
LIMD1-202ENST00000440097 DERL2Q9GZP9 239 aa13.97□□□□□ -0.17
LIMD1-202ENST00000440097 CLPBQ9H078 707 aa13.97□□□□□ -0.17
LIMD1-202ENST00000440097 MID1IP1Q9NPA3 183 aa13.97□□□□□ -0.17
LIMD1-202ENST00000440097 PNPLA3Q9NST1 481 aa13.97□□□□□ -0.17
LIMD1-202ENST00000440097 SLCO3A1Q9UIG8 710 aa13.97□□□□□ -0.17
LIMD1-202ENST00000440097 WDR37Q9Y2I8 494 aa13.97□□□□□ -0.17
LIMD1-202ENST00000440097 WNT6Q9Y6F9 365 aa13.97□□□□□ -0.17
LIMD1-202ENST00000440097 CROCCQ5TZA2 2017 aa13.97□□□□□ -0.17
LIMD1-202ENST00000440097 UBFD1O14562 309 aaKnown RBP13.97□□□□□ -0.17
LIMD1-202ENST00000440097 GRM6O15303 877 aa13.97□□□□□ -0.17
LIMD1-202ENST00000440097 SOCS5O75159 536 aa13.97□□□□□ -0.17
LIMD1-202ENST00000440097 CRCPO75575 148 aa13.97□□□□□ -0.17
LIMD1-202ENST00000440097 UGT1A6P19224 532 aa13.97□□□□□ -0.17
LIMD1-202ENST00000440097 UGT1A1P22309 533 aa13.97□□□□□ -0.17
LIMD1-202ENST00000440097 UGT1A4P22310 534 aa13.97□□□□□ -0.17
LIMD1-202ENST00000440097 UGT1A3P35503 534 aa13.97□□□□□ -0.17
LIMD1-202ENST00000440097 UGT1A5P35504 534 aa13.97□□□□□ -0.17
LIMD1-202ENST00000440097 ATP6V0D1P61421 351 aa13.97□□□□□ -0.17
LIMD1-202ENST00000440097 CTBSQ01459 385 aa13.97□□□□□ -0.17
LIMD1-202ENST00000440097 CTSL3PQ5NE16 218 aa13.97□□□□□ -0.17
LIMD1-202ENST00000440097 SERPINA9Q86WD7 417 aa13.97□□□□□ -0.17
LIMD1-202ENST00000440097 STK40Q8N2I9 435 aa13.97□□□□□ -0.17
LIMD1-202ENST00000440097 RHEBL1Q8TAI7 183 aa13.97□□□□□ -0.17
LIMD1-202ENST00000440097 TRPC4APQ8TEL6 797 aa13.97□□□□□ -0.17
LIMD1-202ENST00000440097 KIAA1191Q96A73 305 aa13.97□□□□□ -0.17
LIMD1-202ENST00000440097 NSUN5Q96P11 429 aaKnown RBP13.97□□□□□ -0.17
LIMD1-202ENST00000440097 TRMOQ9BU70 441 aa13.97□□□□□ -0.17
LIMD1-202ENST00000440097 EFCAB1Q9HAE3 211 aa13.97□□□□□ -0.17
LIMD1-202ENST00000440097 SEMA4BQ9NPR2 832 aaPredicted RBP13.97□□□□□ -0.17
LIMD1-202ENST00000440097 ADA2Q9NZK5 511 aa13.97□□□□□ -0.17
LIMD1-202ENST00000440097 CRLS1Q9UJA2 301 aa13.97□□□□□ -0.17
LIMD1-202ENST00000440097 AP4S1Q9Y587 144 aa13.97□□□□□ -0.17
LIMD1-202ENST00000440097 LINC01553A4QN01 128 aa13.96□□□□□ -0.17
LIMD1-202ENST00000440097 TMX2-CTNND1H3BSU7 103 aa13.96□□□□□ -0.17
LIMD1-202ENST00000440097 PPP6CO00743 305 aa13.96□□□□□ -0.17
LIMD1-202ENST00000440097 PRMT5O14744 637 aaPredicted RBP13.96□□□□□ -0.17
LIMD1-202ENST00000440097 SNX2O60749 519 aa13.96□□□□□ -0.17
LIMD1-202ENST00000440097 KERAO60938 352 aa13.96□□□□□ -0.17
LIMD1-202ENST00000440097 CBFA2T3O75081 653 aa13.96□□□□□ -0.17
LIMD1-202ENST00000440097 ESR1P03372 595 aa13.96□□□□□ -0.17
LIMD1-202ENST00000440097 UGT2B4P06133 528 aa13.96□□□□□ -0.17
LIMD1-202ENST00000440097 ITGALP20701 1170 aa13.96□□□□□ -0.17
LIMD1-202ENST00000440097 EEF1DP29692 281 aaKnown RBP13.96□□□□□ -0.17
LIMD1-202ENST00000440097 TUBA4AP68366 448 aa13.96□□□□□ -0.17
LIMD1-202ENST00000440097 UNC50Q53HI1 259 aa13.96□□□□□ -0.17
LIMD1-202ENST00000440097 LY6G5CQ5SRR4 150 aa13.96□□□□□ -0.17
LIMD1-202ENST00000440097 C22orf39Q6P5X5 142 aa13.96□□□□□ -0.17
LIMD1-202ENST00000440097 Q6ZVU0 165 aa13.96□□□□□ -0.17
LIMD1-202ENST00000440097 GPR141Q7Z602 305 aa13.96□□□□□ -0.17
LIMD1-202ENST00000440097 TSPAN33Q86UF1 283 aa13.96□□□□□ -0.17
LIMD1-202ENST00000440097 CPSF7Q8N684 471 aaKnown RBP13.96□□□□□ -0.17
LIMD1-202ENST00000440097 CLDN19Q8N6F1 224 aa13.96□□□□□ -0.17
LIMD1-202ENST00000440097 ATOH8Q96SQ7 321 aa13.96□□□□□ -0.17
LIMD1-202ENST00000440097 PCDHAC1Q9H158 963 aa13.96□□□□□ -0.17
LIMD1-202ENST00000440097 ABCG8Q9H221 673 aa13.96□□□□□ -0.17
LIMD1-202ENST00000440097 ZNF385DQ9H6B1 395 aa13.96□□□□□ -0.17
LIMD1-202ENST00000440097 SYCE1LA8MT33 242 aa13.96□□□□□ -0.17
LIMD1-202ENST00000440097 H0YJX3 145 aa13.96□□□□□ -0.17
LIMD1-202ENST00000440097 H7C0S8 307 aa13.96□□□□□ -0.17
LIMD1-202ENST00000440097 SDHDO14521 159 aa13.96□□□□□ -0.17
LIMD1-202ENST00000440097 CLASP2O75122 1294 aaKnown RBP13.96□□□□□ -0.17
LIMD1-202ENST00000440097 ECI2O75521 394 aa13.96□□□□□ -0.17
LIMD1-202ENST00000440097 ZNF821O75541 412 aaPredicted RBP13.96□□□□□ -0.17
LIMD1-202ENST00000440097 TRIM16O95361 564 aa13.96□□□□□ -0.17
LIMD1-202ENST00000440097 PABPC1P11940 636 aaKnown RBP13.96□□□□□ -0.17
LIMD1-202ENST00000440097 MTHFD2P13995 350 aa13.96□□□□□ -0.17
LIMD1-202ENST00000440097 ZNF7P17097 686 aaPredicted RBP13.96□□□□□ -0.17
LIMD1-202ENST00000440097 RECQLP46063 649 aaPredicted RBP13.96□□□□□ -0.17
LIMD1-202ENST00000440097 PTK2BQ14289 1009 aa13.96□□□□□ -0.17
LIMD1-202ENST00000440097 KCTD21Q4G0X4 260 aa13.96□□□□□ -0.17
LIMD1-202ENST00000440097 SETMARQ53H47 684 aaPredicted RBP13.96□□□□□ -0.17
LIMD1-202ENST00000440097 MTX3Q5HYI7 312 aa13.96□□□□□ -0.17
LIMD1-202ENST00000440097 FRA10AC1Q70Z53 315 aa13.96□□□□□ -0.17
LIMD1-202ENST00000440097 GPR180Q86V85 440 aa13.96□□□□□ -0.17
LIMD1-202ENST00000440097 DDIASQ8IXT1 998 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms