RNA–Protein interactions for RNA: ENST00000439961.2

SUMO1P3-201, Transcript of SUMO1 pseudogene 3, humanhuman

BASIC

Gene SUMO1P3, Length 304 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1P3-201ENST00000439961 UTYO14607 1347 aa0.48□□□□□ -2.33
SUMO1P3-201ENST00000439961 LOC101059948A0A1B0GTJ6 334 aa0.48□□□□□ -2.33
SUMO1P3-201ENST00000439961 CCDC194A0A1B0GVG4 234 aa0.48□□□□□ -2.33
SUMO1P3-201ENST00000439961 PI4K2BG5E9Z4 385 aa0.48□□□□□ -2.33
SUMO1P3-201ENST00000439961 ATP6V0E1O15342 81 aa0.48□□□□□ -2.33
SUMO1P3-201ENST00000439961 TSPAN6O43657 245 aa0.48□□□□□ -2.33
SUMO1P3-201ENST00000439961 HOXB5P09067 269 aa0.48□□□□□ -2.33
SUMO1P3-201ENST00000439961 IRF1P10914 325 aa0.48□□□□□ -2.33
SUMO1P3-201ENST00000439961 TNFSF4P23510 183 aa0.48□□□□□ -2.33
SUMO1P3-201ENST00000439961 ARL1P40616 181 aaPredicted RBP0.48□□□□□ -2.33
SUMO1P3-201ENST00000439961 TECP42680 631 aa0.48□□□□□ -2.33
SUMO1P3-201ENST00000439961 GPD2P43304 727 aa0.48□□□□□ -2.33
SUMO1P3-201ENST00000439961 TM4SF4P48230 202 aa0.48□□□□□ -2.33
SUMO1P3-201ENST00000439961 PRIM2P49643 509 aa0.48□□□□□ -2.33
SUMO1P3-201ENST00000439961 CDH11P55287 796 aa0.48□□□□□ -2.33
SUMO1P3-201ENST00000439961 AP2B1P63010 937 aa0.48□□□□□ -2.33
SUMO1P3-201ENST00000439961 MECOMQ03112 1051 aa0.48□□□□□ -2.33
SUMO1P3-201ENST00000439961 CHRNDQ07001 517 aa0.48□□□□□ -2.33
SUMO1P3-201ENST00000439961 PDCLQ13371 301 aa0.48□□□□□ -2.33
SUMO1P3-201ENST00000439961 UBE4AQ14139 1066 aa0.48□□□□□ -2.33
SUMO1P3-201ENST00000439961 SPARCL1Q14515 664 aa0.48□□□□□ -2.33
SUMO1P3-201ENST00000439961 HIST2H2ACQ16777 129 aaPredicted RBP0.48□□□□□ -2.33
SUMO1P3-201ENST00000439961 FAM209BQ5JX69 171 aa0.48□□□□□ -2.33
SUMO1P3-201ENST00000439961 UTF1Q5T230 341 aa0.48□□□□□ -2.33
SUMO1P3-201ENST00000439961 NAA35Q5VZE5 725 aa0.48□□□□□ -2.33
SUMO1P3-201ENST00000439961 PGBD2Q6P3X8 592 aa0.48□□□□□ -2.33
SUMO1P3-201ENST00000439961 CACNA2D4Q7Z3S7 1137 aa0.48□□□□□ -2.33
SUMO1P3-201ENST00000439961 FMNL3Q8IVF7 1028 aa0.48□□□□□ -2.33
SUMO1P3-201ENST00000439961 CCDC117Q8IWD4 279 aaPredicted RBP0.48□□□□□ -2.33
SUMO1P3-201ENST00000439961 SYTL1Q8IYJ3 562 aa0.48□□□□□ -2.33
SUMO1P3-201ENST00000439961 CPXM2Q8N436 756 aa0.48□□□□□ -2.33
SUMO1P3-201ENST00000439961 DNAJC22Q8N4W6 341 aa0.48□□□□□ -2.33
SUMO1P3-201ENST00000439961 ZCCHC9Q8N567 271 aaKnown RBP0.48□□□□□ -2.33
SUMO1P3-201ENST00000439961 OR2C3Q8N628 320 aa0.48□□□□□ -2.33
SUMO1P3-201ENST00000439961 USP38Q8NB14 1042 aa0.48□□□□□ -2.33
SUMO1P3-201ENST00000439961 C11orf65Q8NCR3 313 aa0.48□□□□□ -2.33
SUMO1P3-201ENST00000439961 PPP4R1Q8TF05 950 aa0.48□□□□□ -2.33
SUMO1P3-201ENST00000439961 U2AF1L4Q8WU68 220 aaKnown RBP0.48□□□□□ -2.33
SUMO1P3-201ENST00000439961 SMAP2Q8WU79 429 aaPredicted RBP0.48□□□□□ -2.33
SUMO1P3-201ENST00000439961 STAMQ92783 540 aa0.48□□□□□ -2.33
SUMO1P3-201ENST00000439961 C3orf49Q96BT1 292 aa0.48□□□□□ -2.33
SUMO1P3-201ENST00000439961 LTV1Q96GA3 475 aaPredicted RBP0.48□□□□□ -2.33
SUMO1P3-201ENST00000439961 TMEM41AQ96HV5 264 aa0.48□□□□□ -2.33
SUMO1P3-201ENST00000439961 CHCHD5Q9BSY4 110 aa0.48□□□□□ -2.33
SUMO1P3-201ENST00000439961 SIL1Q9H173 461 aa0.48□□□□□ -2.33
SUMO1P3-201ENST00000439961 ADNPQ9H2P0 1102 aa0.48□□□□□ -2.33
SUMO1P3-201ENST00000439961 BPIFA1Q9NP55 256 aa0.48□□□□□ -2.33
SUMO1P3-201ENST00000439961 ARFGAP3Q9NP61 516 aa0.48□□□□□ -2.33
SUMO1P3-201ENST00000439961 SAYSD1Q9NPB0 183 aa0.48□□□□□ -2.33
SUMO1P3-201ENST00000439961 G6PC2Q9NQR9 355 aa0.48□□□□□ -2.33
SUMO1P3-201ENST00000439961 RASSF1Q9NS23 344 aa0.48□□□□□ -2.33
SUMO1P3-201ENST00000439961 RPS6KB2Q9UBS0 482 aa0.48□□□□□ -2.33
SUMO1P3-201ENST00000439961 UBA2Q9UBT2 640 aaPredicted RBP0.48□□□□□ -2.33
SUMO1P3-201ENST00000439961 DDX20Q9UHI6 824 aaKnown RBP0.48□□□□□ -2.33
SUMO1P3-201ENST00000439961 NOB1Q9ULX3 412 aaKnown RBP0.48□□□□□ -2.33
SUMO1P3-201ENST00000439961 ERVK-11Q9UQG0 969 aa0.48□□□□□ -2.33
SUMO1P3-201ENST00000439961 DDX52Q9Y2R4 599 aaKnown RBP eCLIP0.48□□□□□ -2.33
SUMO1P3-201ENST00000439961 EID1Q9Y6B2 187 aa0.48□□□□□ -2.33
SUMO1P3-201ENST00000439961 ANKRD62A6NC57 917 aa0.47□□□□□ -2.33
SUMO1P3-201ENST00000439961 E7EVH7 732 aa0.47□□□□□ -2.33
SUMO1P3-201ENST00000439961 ANKRD28O15084 1053 aa0.47□□□□□ -2.33
SUMO1P3-201ENST00000439961 TSPAN3O60637 253 aa0.47□□□□□ -2.33
SUMO1P3-201ENST00000439961 GUCY1B2O75343 617 aa0.47□□□□□ -2.33
SUMO1P3-201ENST00000439961 MT-CYBP00156 380 aaPredicted RBP0.47□□□□□ -2.33
SUMO1P3-201ENST00000439961 ATF3P18847 181 aa0.47□□□□□ -2.33
SUMO1P3-201ENST00000439961 MDKP21741 143 aaPredicted RBP0.47□□□□□ -2.33
SUMO1P3-201ENST00000439961 CST5P28325 142 aaPredicted RBP0.47□□□□□ -2.33
SUMO1P3-201ENST00000439961 CHRNA3P32297 505 aa0.47□□□□□ -2.33
SUMO1P3-201ENST00000439961 RBM5P52756 815 aaKnown RBP eCLIP0.47□□□□□ -2.33
SUMO1P3-201ENST00000439961 AK2P54819 239 aa0.47□□□□□ -2.33
SUMO1P3-201ENST00000439961 FOXO1Q12778 655 aa0.47□□□□□ -2.33
SUMO1P3-201ENST00000439961 GRIK3Q13003 919 aa0.47□□□□□ -2.33
SUMO1P3-201ENST00000439961 MFAP5Q13361 173 aa0.47□□□□□ -2.33
SUMO1P3-201ENST00000439961 STARD3Q14849 445 aa0.47□□□□□ -2.33
SUMO1P3-201ENST00000439961 TAF13Q15543 124 aa0.47□□□□□ -2.33
SUMO1P3-201ENST00000439961 SMAD1Q15797 465 aaKnown RBP0.47□□□□□ -2.33
SUMO1P3-201ENST00000439961 CTXN3Q4LDR2 81 aa0.47□□□□□ -2.33
SUMO1P3-201ENST00000439961 CBWD5Q5RIA9 395 aa0.47□□□□□ -2.33
SUMO1P3-201ENST00000439961 SIGIRRQ6IA17 410 aa0.47□□□□□ -2.33
SUMO1P3-201ENST00000439961 CPLX2Q6PUV4 134 aaKnown RBP0.47□□□□□ -2.33
SUMO1P3-201ENST00000439961 RRM2BQ7LG56 351 aa0.47□□□□□ -2.33
SUMO1P3-201ENST00000439961 WDR75Q8IWA0 830 aaKnown RBP0.47□□□□□ -2.33
SUMO1P3-201ENST00000439961 MARVELD2Q8N4S9 558 aa0.47□□□□□ -2.33
SUMO1P3-201ENST00000439961 ZNF527Q8NB42 609 aa0.47□□□□□ -2.33
SUMO1P3-201ENST00000439961 OR6Y1Q8NGX8 325 aa0.47□□□□□ -2.33
SUMO1P3-201ENST00000439961 TTC8Q8TAM2 541 aa0.47□□□□□ -2.33
SUMO1P3-201ENST00000439961 CNOT9Q92600 299 aaKnown RBP0.47□□□□□ -2.33
SUMO1P3-201ENST00000439961 KTI12Q96EK9 354 aaPredicted RBP0.47□□□□□ -2.33
SUMO1P3-201ENST00000439961 MASTLQ96GX5 879 aa0.47□□□□□ -2.33
SUMO1P3-201ENST00000439961 NSL1Q96IY1 281 aa0.47□□□□□ -2.33
SUMO1P3-201ENST00000439961 CCDC138Q96M89 665 aa0.47□□□□□ -2.33
SUMO1P3-201ENST00000439961 HARBI1Q96MB7 349 aa0.47□□□□□ -2.33
SUMO1P3-201ENST00000439961 CD180Q99467 661 aa0.47□□□□□ -2.33
SUMO1P3-201ENST00000439961 LGMNQ99538 433 aa0.47□□□□□ -2.33
SUMO1P3-201ENST00000439961 HERC2P3Q9BVR0 1158 aa0.47□□□□□ -2.33
SUMO1P3-201ENST00000439961 IFIH1Q9BYX4 1025 aaKnown RBP0.47□□□□□ -2.33
SUMO1P3-201ENST00000439961 PABPC3Q9H361 631 aaKnown RBP0.47□□□□□ -2.33
SUMO1P3-201ENST00000439961 ATP13A3Q9H7F0 1226 aa0.47□□□□□ -2.33
SUMO1P3-201ENST00000439961 KRT84Q9NSB2 600 aa0.47□□□□□ -2.33
SUMO1P3-201ENST00000439961 ZNF69Q9UC07 566 aa0.47□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms