RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 SLC19A1P41440 591 aa19.09■□□□□ 0.65
SEMA3B-206ENST00000439487 ELK3P41970 407 aa19.09■□□□□ 0.65
SEMA3B-206ENST00000439487 FASLGP48023 281 aa19.09■□□□□ 0.65
SEMA3B-206ENST00000439487 HHEXQ03014 270 aa19.09■□□□□ 0.65
SEMA3B-206ENST00000439487 CALCOCO2Q13137 446 aa19.09■□□□□ 0.65
SEMA3B-206ENST00000439487 TRADDQ15628 312 aa19.09■□□□□ 0.65
SEMA3B-206ENST00000439487 LONRF1Q17RB8 773 aa19.09■□□□□ 0.65
SEMA3B-206ENST00000439487 CDCP2Q5VXM1 449 aa19.09■□□□□ 0.65
SEMA3B-206ENST00000439487 MRNIPQ6NTE8 343 aa19.09■□□□□ 0.65
SEMA3B-206ENST00000439487 C8orf74Q6P047 294 aa19.09■□□□□ 0.65
SEMA3B-206ENST00000439487 SPRED1Q7Z699 444 aa19.09■□□□□ 0.65
SEMA3B-206ENST00000439487 SDCCAG8Q86SQ7 713 aaPredicted RBP19.09■□□□□ 0.65
SEMA3B-206ENST00000439487 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.09■□□□□ 0.65
SEMA3B-206ENST00000439487 MNS1Q8NEH6 495 aa19.09■□□□□ 0.65
SEMA3B-206ENST00000439487 GPR150Q8NGU9 434 aa19.09■□□□□ 0.65
SEMA3B-206ENST00000439487 WWP1Q9H0M0 922 aa19.09■□□□□ 0.65
SEMA3B-206ENST00000439487 RAB17Q9H0T7 212 aa19.09■□□□□ 0.65
SEMA3B-206ENST00000439487 LRRN3Q9H3W5 708 aa19.09■□□□□ 0.65
SEMA3B-206ENST00000439487 VPS37BQ9H9H4 285 aa19.09■□□□□ 0.65
SEMA3B-206ENST00000439487 SARS2Q9NP81 518 aaKnown RBP19.09■□□□□ 0.65
SEMA3B-206ENST00000439487 C20orf96Q9NUD7 363 aaPredicted RBP19.09■□□□□ 0.65
SEMA3B-206ENST00000439487 GRHL1Q9NZI5 618 aa19.09■□□□□ 0.65
SEMA3B-206ENST00000439487 ANGPTL2Q9UKU9 493 aa19.09■□□□□ 0.65
SEMA3B-206ENST00000439487 CHMP2BQ9UQN3 213 aa19.09■□□□□ 0.65
SEMA3B-206ENST00000439487 FAM169AQ9Y6X4 670 aa19.09■□□□□ 0.65
SEMA3B-206ENST00000439487 CHD8Q9HCK8 2581 aa19.08■□□□□ 0.65
SEMA3B-206ENST00000439487 PRAMEF33A0A0G2JMD5 474 aa19.08■□□□□ 0.64
SEMA3B-206ENST00000439487 CTAGE15A4D2H0 777 aa19.08■□□□□ 0.64
SEMA3B-206ENST00000439487 KLHL33A6NCF5 533 aa19.08■□□□□ 0.64
SEMA3B-206ENST00000439487 QSOX1O00391 747 aa19.08■□□□□ 0.64
SEMA3B-206ENST00000439487 PRMT5O14744 637 aaPredicted RBP19.08■□□□□ 0.64
SEMA3B-206ENST00000439487 KRT37O76014 449 aa19.08■□□□□ 0.64
SEMA3B-206ENST00000439487 F7P08709 466 aaPredicted RBP19.08■□□□□ 0.64
SEMA3B-206ENST00000439487 OR56A5P0C7T3 313 aa19.08■□□□□ 0.64
SEMA3B-206ENST00000439487 CTAGE8P0CG41 777 aa19.08■□□□□ 0.64
SEMA3B-206ENST00000439487 ITGB6P18564 788 aa19.08■□□□□ 0.64
SEMA3B-206ENST00000439487 XRCC1P18887 633 aaPredicted RBP19.08■□□□□ 0.64
SEMA3B-206ENST00000439487 ALDH4A1P30038 563 aa19.08■□□□□ 0.64
SEMA3B-206ENST00000439487 HALP42357 657 aa19.08■□□□□ 0.64
SEMA3B-206ENST00000439487 UBE2IP63279 158 aaKnown RBP19.08■□□□□ 0.64
SEMA3B-206ENST00000439487 THOC5Q13769 683 aaKnown RBP19.08■□□□□ 0.64
SEMA3B-206ENST00000439487 CRYMQ14894 314 aa19.08■□□□□ 0.64
SEMA3B-206ENST00000439487 ZNF658BQ4V348 819 aaPredicted RBP19.08■□□□□ 0.64
SEMA3B-206ENST00000439487 CTAGE6Q86UF2 777 aa19.08■□□□□ 0.64
SEMA3B-206ENST00000439487 ANKMY2Q8IV38 441 aa19.08■□□□□ 0.64
SEMA3B-206ENST00000439487 TRIM48Q8IWZ4 208 aa19.08■□□□□ 0.64
SEMA3B-206ENST00000439487 CTAGE4Q8IX94 777 aa19.08■□□□□ 0.64
SEMA3B-206ENST00000439487 UNC5BQ8IZJ1 945 aa19.08■□□□□ 0.64
SEMA3B-206ENST00000439487 MMGT1Q8N4V1 131 aa19.08■□□□□ 0.64
SEMA3B-206ENST00000439487 NOA1Q8NC60 698 aaKnown RBP19.08■□□□□ 0.64
SEMA3B-206ENST00000439487 CFAP36Q96G28 342 aa19.08■□□□□ 0.64
SEMA3B-206ENST00000439487 WDR83Q9BRX9 315 aaKnown RBP19.08■□□□□ 0.64
SEMA3B-206ENST00000439487 STN1Q9H668 368 aaKnown RBP19.08■□□□□ 0.64
SEMA3B-206ENST00000439487 COG4Q9H9E3 785 aa19.08■□□□□ 0.64
SEMA3B-206ENST00000439487 ACSL5Q9ULC5 683 aa19.08■□□□□ 0.64
SEMA3B-206ENST00000439487 CLCA2Q9UQC9 943 aa19.08■□□□□ 0.64
SEMA3B-206ENST00000439487 NEUROG3Q9Y4Z2 214 aa19.08■□□□□ 0.64
SEMA3B-206ENST00000439487 TPRP12270 2363 aaKnown RBP19.08■□□□□ 0.64
SEMA3B-206ENST00000439487 UBA6A0AVT1 1052 aaPredicted RBP19.07■□□□□ 0.64
SEMA3B-206ENST00000439487 FAM221BA6H8Z2 402 aa19.07■□□□□ 0.64
SEMA3B-206ENST00000439487 IQCF5A8MTL0 148 aa19.07■□□□□ 0.64
SEMA3B-206ENST00000439487 NTN3O00634 580 aaPredicted RBP19.07■□□□□ 0.64
SEMA3B-206ENST00000439487 VIPP01282 170 aa19.07■□□□□ 0.64
SEMA3B-206ENST00000439487 FTH1P02794 183 aa19.07■□□□□ 0.64
SEMA3B-206ENST00000439487 OGNP20774 298 aaKnown RBP19.07■□□□□ 0.64
SEMA3B-206ENST00000439487 GPR3P46089 330 aa19.07■□□□□ 0.64
SEMA3B-206ENST00000439487 SHC2P98077 582 aa19.07■□□□□ 0.64
SEMA3B-206ENST00000439487 PDIA2Q13087 525 aaKnown RBP19.07■□□□□ 0.64
SEMA3B-206ENST00000439487 TARDBPQ13148 414 aaKnown RBP eCLIP19.07■□□□□ 0.64
SEMA3B-206ENST00000439487 SPIDRQ14159 915 aa19.07■□□□□ 0.64
SEMA3B-206ENST00000439487 NR1D2Q14995 579 aa19.07■□□□□ 0.64
SEMA3B-206ENST00000439487 RPE65Q16518 533 aa19.07■□□□□ 0.64
SEMA3B-206ENST00000439487 TYSND1Q2T9J0 566 aa19.07■□□□□ 0.64
SEMA3B-206ENST00000439487 AMZ1Q400G9 498 aa19.07■□□□□ 0.64
SEMA3B-206ENST00000439487 NAPRTQ6XQN6 538 aa19.07■□□□□ 0.64
SEMA3B-206ENST00000439487 CENPUQ71F23 418 aa19.07■□□□□ 0.64
SEMA3B-206ENST00000439487 CILP2Q8IUL8 1156 aa19.07■□□□□ 0.64
SEMA3B-206ENST00000439487 LKAAEAR1Q8TD35 194 aa19.07■□□□□ 0.64
SEMA3B-206ENST00000439487 ELMO1Q92556 727 aa19.07■□□□□ 0.64
SEMA3B-206ENST00000439487 CXorf40BQ96DE9 158 aa19.07■□□□□ 0.64
SEMA3B-206ENST00000439487 GFM1Q96RP9 751 aaKnown RBP19.07■□□□□ 0.64
SEMA3B-206ENST00000439487 INSM2Q96T92 566 aaPredicted RBP19.07■□□□□ 0.64
SEMA3B-206ENST00000439487 TCF12Q99081 682 aa19.07■□□□□ 0.64
SEMA3B-206ENST00000439487 SLC38A3Q99624 504 aa19.07■□□□□ 0.64
SEMA3B-206ENST00000439487 NAT9Q9BTE0 207 aa19.07■□□□□ 0.64
SEMA3B-206ENST00000439487 P2RY12Q9H244 342 aa19.07■□□□□ 0.64
SEMA3B-206ENST00000439487 ATXN7L1Q9ULK2 861 aaPredicted RBP19.07■□□□□ 0.64
SEMA3B-206ENST00000439487 CFAP20Q9Y6A4 193 aaKnown RBP19.07■□□□□ 0.64
SEMA3B-206ENST00000439487 TEX264Q9Y6I9 313 aa19.07■□□□□ 0.64
SEMA3B-206ENST00000439487 E7ESA3 106 aa19.06■□□□□ 0.64
SEMA3B-206ENST00000439487 TTC4O95801 387 aa19.06■□□□□ 0.64
SEMA3B-206ENST00000439487 GSTM1P09488 218 aa19.06■□□□□ 0.64
SEMA3B-206ENST00000439487 SLC35G4P0C7Q5 338 aa19.06■□□□□ 0.64
SEMA3B-206ENST00000439487 PREPP48147 710 aa19.06■□□□□ 0.64
SEMA3B-206ENST00000439487 PLTPP55058 493 aa19.06■□□□□ 0.64
SEMA3B-206ENST00000439487 EIF3BP55884 814 aaKnown RBP19.06■□□□□ 0.64
SEMA3B-206ENST00000439487 GSTM4Q03013 218 aa19.06■□□□□ 0.64
SEMA3B-206ENST00000439487 CTBP1Q13363 440 aa19.06■□□□□ 0.64
SEMA3B-206ENST00000439487 FASTKD3Q14CZ7 662 aaKnown RBP19.06■□□□□ 0.64
SEMA3B-206ENST00000439487 BRD3Q15059 726 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms