RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 NCAPGQ9BPX3 1015 aa3.27□□□□□ -1.89
HMGB3P12-201ENST00000438745 TREX2Q9BQ50 279 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P12-201ENST00000438745 SRSF8Q9BRL6 282 aaKnown RBP3.27□□□□□ -1.89
HMGB3P12-201ENST00000438745 HAUS8Q9BT25 410 aa3.27□□□□□ -1.89
HMGB3P12-201ENST00000438745 KCNN2Q9H2S1 579 aa3.27□□□□□ -1.89
HMGB3P12-201ENST00000438745 EVA1AQ9H8M9 152 aa3.27□□□□□ -1.89
HMGB3P12-201ENST00000438745 TTC7AQ9ULT0 858 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P12-201ENST00000438745 MTMR6Q9Y217 621 aa3.27□□□□□ -1.89
HMGB3P12-201ENST00000438745 LAMB4A4D0S4 1761 aa3.27□□□□□ -1.89
HMGB3P12-201ENST00000438745 PKD1L2Q7Z442 2459 aa3.27□□□□□ -1.89
HMGB3P12-201ENST00000438745 PIK3C2GO75747 1445 aa3.27□□□□□ -1.89
HMGB3P12-201ENST00000438745 SMG6Q86US8 1419 aaKnown RBP3.27□□□□□ -1.89
HMGB3P12-201ENST00000438745 VPS8Q8N3P4 1428 aa3.27□□□□□ -1.89
HMGB3P12-201ENST00000438745 WDR81Q562E7 1941 aa3.27□□□□□ -1.89
HMGB3P12-201ENST00000438745 UBR3Q6ZT12 1888 aa3.26□□□□□ -1.89
HMGB3P12-201ENST00000438745 CGNL1Q0VF96 1302 aa3.26□□□□□ -1.89
HMGB3P12-201ENST00000438745 PPLO60437 1756 aa3.26□□□□□ -1.89
HMGB3P12-201ENST00000438745 PAPPA2Q9BXP8 1791 aa3.26□□□□□ -1.89
HMGB3P12-201ENST00000438745 IGHV4OR15-8A0A075B7B6 117 aa3.26□□□□□ -1.89
HMGB3P12-201ENST00000438745 hCG_1807616A0A1W2PRN6 198 aa3.26□□□□□ -1.89
HMGB3P12-201ENST00000438745 SOCS6O14544 535 aa3.26□□□□□ -1.89
HMGB3P12-201ENST00000438745 MID1O15344 667 aa3.26□□□□□ -1.89
HMGB3P12-201ENST00000438745 AHCYL1O43865 530 aa3.26□□□□□ -1.89
HMGB3P12-201ENST00000438745 NDUFS7O75251 213 aa3.26□□□□□ -1.89
HMGB3P12-201ENST00000438745 KDM4BO94953 1096 aa3.26□□□□□ -1.89
HMGB3P12-201ENST00000438745 KCNK5O95279 499 aa3.26□□□□□ -1.89
HMGB3P12-201ENST00000438745 OR2C1O95371 312 aa3.26□□□□□ -1.89
HMGB3P12-201ENST00000438745 EGFP01133 1207 aa3.26□□□□□ -1.89
HMGB3P12-201ENST00000438745 SP1P08047 785 aa3.26□□□□□ -1.89
HMGB3P12-201ENST00000438745 FOSL2P15408 326 aa3.26□□□□□ -1.89
HMGB3P12-201ENST00000438745 ALOX12P18054 663 aa3.26□□□□□ -1.89
HMGB3P12-201ENST00000438745 TM4SF1P30408 202 aa3.26□□□□□ -1.89
HMGB3P12-201ENST00000438745 GCH1P30793 250 aa3.26□□□□□ -1.89
HMGB3P12-201ENST00000438745 HOXD13P35453 343 aa3.26□□□□□ -1.89
HMGB3P12-201ENST00000438745 UBA7P41226 1012 aa3.26□□□□□ -1.89
HMGB3P12-201ENST00000438745 PRAMEP78395 509 aa3.26□□□□□ -1.89
HMGB3P12-201ENST00000438745 CREB5Q02930 508 aa3.26□□□□□ -1.89
HMGB3P12-201ENST00000438745 CDC16Q13042 620 aa3.26□□□□□ -1.89
HMGB3P12-201ENST00000438745 ITPK1Q13572 414 aa3.26□□□□□ -1.89
HMGB3P12-201ENST00000438745 PDE1CQ14123 709 aaPredicted RBP3.26□□□□□ -1.89
HMGB3P12-201ENST00000438745 WTAPQ15007 396 aa3.26□□□□□ -1.89
HMGB3P12-201ENST00000438745 TOMM20Q15388 145 aa3.26□□□□□ -1.89
HMGB3P12-201ENST00000438745 LRIT3Q3SXY7 679 aa3.26□□□□□ -1.89
HMGB3P12-201ENST00000438745 TMEM31Q5JXX7 168 aa3.26□□□□□ -1.89
HMGB3P12-201ENST00000438745 GGNBP1Q5YKI7 109 aa3.26□□□□□ -1.89
HMGB3P12-201ENST00000438745 SIGIRRQ6IA17 410 aa3.26□□□□□ -1.89
HMGB3P12-201ENST00000438745 METTL2BQ6P1Q9 378 aaKnown RBP3.26□□□□□ -1.89
HMGB3P12-201ENST00000438745 UNQ6126/PRO20091Q6UXV3 157 aa3.26□□□□□ -1.89
HMGB3P12-201ENST00000438745 GLDNQ6ZMI3 551 aaPredicted RBP3.26□□□□□ -1.89
HMGB3P12-201ENST00000438745 DPPA4Q7L190 304 aa3.26□□□□□ -1.89
HMGB3P12-201ENST00000438745 TAOK1Q7L7X3 1001 aa3.26□□□□□ -1.89
HMGB3P12-201ENST00000438745 SZRD1Q7Z422 152 aa3.26□□□□□ -1.89
HMGB3P12-201ENST00000438745 PCGF5Q86SE9 256 aa3.26□□□□□ -1.89
HMGB3P12-201ENST00000438745 CHERPQ8IWX8 916 aaKnown RBP3.26□□□□□ -1.89
HMGB3P12-201ENST00000438745 OR8K5Q8NH50 307 aa3.26□□□□□ -1.89
HMGB3P12-201ENST00000438745 HMGCLL1Q8TB92 370 aa3.26□□□□□ -1.89
HMGB3P12-201ENST00000438745 TANKQ92844 425 aa3.26□□□□□ -1.89
HMGB3P12-201ENST00000438745 MTBPQ96DY7 904 aa3.26□□□□□ -1.89
HMGB3P12-201ENST00000438745 FAM120BQ96EK7 910 aaKnown RBP3.26□□□□□ -1.89
HMGB3P12-201ENST00000438745 ERO1AQ96HE7 468 aa3.26□□□□□ -1.89
HMGB3P12-201ENST00000438745 METTL2AQ96IZ6 378 aaKnown RBP3.26□□□□□ -1.89
HMGB3P12-201ENST00000438745 OR1F2PQ96R84 312 aa3.26□□□□□ -1.89
HMGB3P12-201ENST00000438745 GAD1Q99259 594 aa3.26□□□□□ -1.89
HMGB3P12-201ENST00000438745 ACOX2Q99424 681 aa3.26□□□□□ -1.89
HMGB3P12-201ENST00000438745 PDZD7Q9H5P4 517 aa3.26□□□□□ -1.89
HMGB3P12-201ENST00000438745 PCDH9Q9HC56 1237 aa3.26□□□□□ -1.89
HMGB3P12-201ENST00000438745 SDF2L1Q9HCN8 221 aa3.26□□□□□ -1.89
HMGB3P12-201ENST00000438745 SETD4Q9NVD3 440 aa3.26□□□□□ -1.89
HMGB3P12-201ENST00000438745 MALT1Q9UDY8 824 aa3.26□□□□□ -1.89
HMGB3P12-201ENST00000438745 TINAGQ9UJW2 476 aa3.26□□□□□ -1.89
HMGB3P12-201ENST00000438745 NENFQ9UMX5 172 aa3.26□□□□□ -1.89
HMGB3P12-201ENST00000438745 PCDHGB4Q9UN71 923 aa3.26□□□□□ -1.89
HMGB3P12-201ENST00000438745 SESN1Q9Y6P5 492 aa3.26□□□□□ -1.89
HMGB3P12-201ENST00000438745 CACNA1GO43497 2377 aa3.25□□□□□ -1.89
HMGB3P12-201ENST00000438745 A0A1W2PQ09 198 aa3.25□□□□□ -1.89
HMGB3P12-201ENST00000438745 ATP2A1O14983 1001 aa3.25□□□□□ -1.89
HMGB3P12-201ENST00000438745 GRID2O43424 1007 aa3.25□□□□□ -1.89
HMGB3P12-201ENST00000438745 PLRG1O43660 514 aaKnown RBP3.25□□□□□ -1.89
HMGB3P12-201ENST00000438745 HS6ST1O60243 411 aa3.25□□□□□ -1.89
HMGB3P12-201ENST00000438745 RFPL2O75678 378 aa3.25□□□□□ -1.89
HMGB3P12-201ENST00000438745 SERPINB2P05120 415 aa3.25□□□□□ -1.89
HMGB3P12-201ENST00000438745 RB1P06400 928 aa3.25□□□□□ -1.89
HMGB3P12-201ENST00000438745 CDH2P19022 906 aaPredicted RBP3.25□□□□□ -1.89
HMGB3P12-201ENST00000438745 ANXA7P20073 488 aaKnown RBP3.25□□□□□ -1.89
HMGB3P12-201ENST00000438745 MAOAP21397 527 aa3.25□□□□□ -1.89
HMGB3P12-201ENST00000438745 ZNF132P52740 706 aa3.25□□□□□ -1.89
HMGB3P12-201ENST00000438745 RAD23BP54727 409 aa3.25□□□□□ -1.89
HMGB3P12-201ENST00000438745 TROAPQ12815 778 aa3.25□□□□□ -1.89
HMGB3P12-201ENST00000438745 CHAF1BQ13112 559 aa3.25□□□□□ -1.89
HMGB3P12-201ENST00000438745 IKQ13123 557 aaPredicted RBP3.25□□□□□ -1.89
HMGB3P12-201ENST00000438745 PRKG2Q13237 762 aa3.25□□□□□ -1.89
HMGB3P12-201ENST00000438745 CUL4AQ13619 759 aa3.25□□□□□ -1.89
HMGB3P12-201ENST00000438745 IRF3Q14653 427 aa3.25□□□□□ -1.89
HMGB3P12-201ENST00000438745 SPATA1Q5VX52 437 aa3.25□□□□□ -1.89
HMGB3P12-201ENST00000438745 TMEM198Q66K66 360 aa3.25□□□□□ -1.89
HMGB3P12-201ENST00000438745 PLEKHA7Q6IQ23 1121 aa3.25□□□□□ -1.89
HMGB3P12-201ENST00000438745 DUS1LQ6P1R4 473 aaKnown RBP3.25□□□□□ -1.89
HMGB3P12-201ENST00000438745 FAM122CQ6P4D5 195 aa3.25□□□□□ -1.89
HMGB3P12-201ENST00000438745 SARM1Q6SZW1 724 aa3.25□□□□□ -1.89
HMGB3P12-201ENST00000438745 SEPT14Q6ZU15 432 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 142.8 ms