RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 SRSF1Q07955 248 aaKnown RBP eCLIP17.76■□□□□ 0.43
GTF3A-204ENST00000438571 TUBB3Q13509 450 aa17.76■□□□□ 0.43
GTF3A-204ENST00000438571 PLCL1Q15111 1095 aa17.76■□□□□ 0.43
GTF3A-204ENST00000438571 TFDP3Q5H9I0 405 aa17.76■□□□□ 0.43
GTF3A-204ENST00000438571 LDLRAP1Q5SW96 308 aa17.76■□□□□ 0.43
GTF3A-204ENST00000438571 FNBP1LQ5T0N5 605 aa17.76■□□□□ 0.43
GTF3A-204ENST00000438571 FAM199XQ6PEV8 388 aaPredicted RBP17.76■□□□□ 0.43
GTF3A-204ENST00000438571 BZW1Q7L1Q6 419 aaKnown RBP17.76■□□□□ 0.43
GTF3A-204ENST00000438571 LILRA3Q8N6C8 439 aaPredicted RBP17.76■□□□□ 0.43
GTF3A-204ENST00000438571 SPDYE1Q8NFV5 336 aaPredicted RBP17.76■□□□□ 0.43
GTF3A-204ENST00000438571 ZDHHC12Q96GR4 267 aa17.76■□□□□ 0.43
GTF3A-204ENST00000438571 INSM2Q96T92 566 aaPredicted RBP17.76■□□□□ 0.43
GTF3A-204ENST00000438571 APOL2Q9BQE5 337 aa17.76■□□□□ 0.43
GTF3A-204ENST00000438571 FICDQ9BVA6 458 aa17.76■□□□□ 0.43
GTF3A-204ENST00000438571 WWP1Q9H0M0 922 aa17.76■□□□□ 0.43
GTF3A-204ENST00000438571 LHX9Q9NQ69 397 aa17.76■□□□□ 0.43
GTF3A-204ENST00000438571 FKBPLQ9UIM3 349 aa17.76■□□□□ 0.43
GTF3A-204ENST00000438571 INTUQ9ULD6 942 aa17.76■□□□□ 0.43
GTF3A-204ENST00000438571 PLAAQ9Y263 795 aa17.76■□□□□ 0.43
GTF3A-204ENST00000438571 SGTAO43765 313 aa17.75■□□□□ 0.43
GTF3A-204ENST00000438571 PRAMEF1O95521 474 aa17.75■□□□□ 0.43
GTF3A-204ENST00000438571 EPOP01588 193 aa17.75■□□□□ 0.43
GTF3A-204ENST00000438571 NTRK1P04629 796 aa17.75■□□□□ 0.43
GTF3A-204ENST00000438571 TPM1P09493 284 aa17.75■□□□□ 0.43
GTF3A-204ENST00000438571 MTHFD1P11586 935 aaKnown RBP17.75■□□□□ 0.43
GTF3A-204ENST00000438571 HLA-DPA1P20036 260 aa17.75■□□□□ 0.43
GTF3A-204ENST00000438571 AKT1P31749 480 aa17.75■□□□□ 0.43
GTF3A-204ENST00000438571 TBX2Q13207 712 aaPredicted RBP17.75■□□□□ 0.43
GTF3A-204ENST00000438571 MPP3Q13368 585 aa17.75■□□□□ 0.43
GTF3A-204ENST00000438571 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.75■□□□□ 0.43
GTF3A-204ENST00000438571 CCDC50Q8IVM0 306 aa17.75■□□□□ 0.43
GTF3A-204ENST00000438571 KATNAL2Q8IYT4 538 aa17.75■□□□□ 0.43
GTF3A-204ENST00000438571 SIDT2Q8NBJ9 832 aaKnown RBP17.75■□□□□ 0.43
GTF3A-204ENST00000438571 DTX3LQ8TDB6 740 aa17.75■□□□□ 0.43
GTF3A-204ENST00000438571 NRTNQ99748 197 aa17.75■□□□□ 0.43
GTF3A-204ENST00000438571 HEMGNQ9BXL5 484 aa17.75■□□□□ 0.43
GTF3A-204ENST00000438571 TRIM55Q9BYV6 548 aa17.75■□□□□ 0.43
GTF3A-204ENST00000438571 ZCCHC2Q9C0B9 1178 aaKnown RBP17.75■□□□□ 0.43
GTF3A-204ENST00000438571 SMOXQ9NWM0 555 aa17.75■□□□□ 0.43
GTF3A-204ENST00000438571 HACD3Q9P035 362 aa17.75■□□□□ 0.43
GTF3A-204ENST00000438571 POLHQ9Y253 713 aa17.75■□□□□ 0.43
GTF3A-204ENST00000438571 PCDHB3Q9Y5E6 796 aa17.75■□□□□ 0.43
GTF3A-204ENST00000438571 OR5K3A6NET4 321 aa17.74■□□□□ 0.43
GTF3A-204ENST00000438571 AKR1B15C9JRZ8 316 aaPredicted RBP17.74■□□□□ 0.43
GTF3A-204ENST00000438571 CREG1O75629 220 aa17.74■□□□□ 0.43
GTF3A-204ENST00000438571 MAGEA1P43355 309 aa17.74■□□□□ 0.43
GTF3A-204ENST00000438571 HADHBP55084 474 aaKnown RBP17.74■□□□□ 0.43
GTF3A-204ENST00000438571 XRCC4Q13426 336 aa17.74■□□□□ 0.43
GTF3A-204ENST00000438571 ITGA9Q13797 1035 aa17.74■□□□□ 0.43
GTF3A-204ENST00000438571 SEPT6Q14141 434 aa17.74■□□□□ 0.43
GTF3A-204ENST00000438571 DAAM2Q86T65 1068 aa17.74■□□□□ 0.43
GTF3A-204ENST00000438571 OR4K2Q8NGD2 314 aa17.74■□□□□ 0.43
GTF3A-204ENST00000438571 RMDN2Q96LZ7 410 aa17.74■□□□□ 0.43
GTF3A-204ENST00000438571 C12orf66Q96MD2 445 aa17.74■□□□□ 0.43
GTF3A-204ENST00000438571 FAM118BQ9BPY3 351 aa17.74■□□□□ 0.43
GTF3A-204ENST00000438571 FSD1LQ9BXM9 530 aa17.74■□□□□ 0.43
GTF3A-204ENST00000438571 TWSG1Q9GZX9 223 aa17.74■□□□□ 0.43
GTF3A-204ENST00000438571 GBA3Q9H227 469 aa17.74■□□□□ 0.43
GTF3A-204ENST00000438571 ACTL8Q9H568 366 aa17.74■□□□□ 0.43
GTF3A-204ENST00000438571 RARRES3Q9UL19 164 aa17.74■□□□□ 0.43
GTF3A-204ENST00000438571 PKP3Q9Y446 797 aa17.74■□□□□ 0.43
GTF3A-204ENST00000438571 PCDHGA6Q9Y5G7 932 aa17.74■□□□□ 0.43
GTF3A-204ENST00000438571 NUP210LQ5VU65 1888 aa17.73■□□□□ 0.43
GTF3A-204ENST00000438571 STX7O15400 261 aaKnown RBP17.73■□□□□ 0.43
GTF3A-204ENST00000438571 MTSS1O43312 755 aa17.73■□□□□ 0.43
GTF3A-204ENST00000438571 KCNJ13O60928 360 aa17.73■□□□□ 0.43
GTF3A-204ENST00000438571 MSH3P20585 1137 aa17.73■□□□□ 0.43
GTF3A-204ENST00000438571 PSMB4P28070 264 aa17.73■□□□□ 0.43
GTF3A-204ENST00000438571 CHAF1BQ13112 559 aa17.73■□□□□ 0.43
GTF3A-204ENST00000438571 GPR19Q15760 415 aa17.73■□□□□ 0.43
GTF3A-204ENST00000438571 DNTTIP2Q5QJE6 756 aaKnown RBP17.73■□□□□ 0.43
GTF3A-204ENST00000438571 PRAMEF17Q5VTA0 474 aa17.73■□□□□ 0.43
GTF3A-204ENST00000438571 ZDHHC20Q5W0Z9 365 aa17.73■□□□□ 0.43
GTF3A-204ENST00000438571 METRNLQ641Q3 311 aa17.73■□□□□ 0.43
GTF3A-204ENST00000438571 CPZQ66K79 652 aa17.73■□□□□ 0.43
GTF3A-204ENST00000438571 BBS12Q6ZW61 710 aa17.73■□□□□ 0.43
GTF3A-204ENST00000438571 CNGA4Q8IV77 575 aa17.73■□□□□ 0.43
GTF3A-204ENST00000438571 TC2NQ8N9U0 490 aa17.73■□□□□ 0.43
GTF3A-204ENST00000438571 OR13C4Q8NGS5 318 aa17.73■□□□□ 0.43
GTF3A-204ENST00000438571 ZNF398Q8TD17 642 aa17.73■□□□□ 0.43
GTF3A-204ENST00000438571 UBXN4Q92575 508 aa17.73■□□□□ 0.43
GTF3A-204ENST00000438571 ZNF514Q96K75 400 aaPredicted RBP17.73■□□□□ 0.43
GTF3A-204ENST00000438571 VAT1Q99536 393 aa17.73■□□□□ 0.43
GTF3A-204ENST00000438571 PDE7BQ9NP56 450 aa17.73■□□□□ 0.43
GTF3A-204ENST00000438571 FGF21Q9NSA1 209 aa17.73■□□□□ 0.43
GTF3A-204ENST00000438571 ANKMY1Q9P2S6 941 aa17.73■□□□□ 0.43
GTF3A-204ENST00000438571 TLK1Q9UKI8 766 aa17.73■□□□□ 0.43
GTF3A-204ENST00000438571 PADI1Q9ULC6 663 aa17.73■□□□□ 0.43
GTF3A-204ENST00000438571 ANKRD12Q6UB98 2062 aa17.73■□□□□ 0.43
GTF3A-204ENST00000438571 PIPSLA2A3N6 862 aa17.72■□□□□ 0.43
GTF3A-204ENST00000438571 TLCD2A6NGC4 264 aa17.72■□□□□ 0.43
GTF3A-204ENST00000438571 HACD1B0YJ81 288 aa17.72■□□□□ 0.43
GTF3A-204ENST00000438571 H7C0C1 242 aa17.72■□□□□ 0.43
GTF3A-204ENST00000438571 CCL22O00626 93 aa17.72■□□□□ 0.43
GTF3A-204ENST00000438571 ZRANB2O95218 330 aaKnown RBP eCLIP17.72■□□□□ 0.43
GTF3A-204ENST00000438571 CCNYL3P0C7X3 344 aa17.72■□□□□ 0.43
GTF3A-204ENST00000438571 ADRA1AP35348 466 aa17.72■□□□□ 0.43
GTF3A-204ENST00000438571 TNNT3P45378 269 aaPredicted RBP17.72■□□□□ 0.43
GTF3A-204ENST00000438571 ATP5OP48047 213 aa17.72■□□□□ 0.43
GTF3A-204ENST00000438571 KPNA2P52292 529 aaKnown RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms