RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 CACNA2D2Q9NY47 1150 aa25.3■■□□□ 1.64
CPNE1-216ENST00000437340 PTGDR2Q9Y5Y4 395 aa25.3■■□□□ 1.64
CPNE1-216ENST00000437340 SORBS2O94875 1100 aaKnown RBP25.29■■□□□ 1.64
CPNE1-216ENST00000437340 LINC00032P0C843 101 aa25.29■■□□□ 1.64
CPNE1-216ENST00000437340 TIMP2P16035 220 aa25.29■■□□□ 1.64
CPNE1-216ENST00000437340 VCLP18206 1134 aa25.29■■□□□ 1.64
CPNE1-216ENST00000437340 ZNF423Q2M1K9 1284 aa25.29■■□□□ 1.64
CPNE1-216ENST00000437340 ZNF805Q5CZA5 627 aa25.29■■□□□ 1.64
CPNE1-216ENST00000437340 CMPK2Q5EBM0 449 aa25.29■■□□□ 1.64
CPNE1-216ENST00000437340 TCHHL1Q5QJ38 904 aaPredicted RBP25.29■■□□□ 1.64
CPNE1-216ENST00000437340 FAM219BQ5XKK7 198 aa25.29■■□□□ 1.64
CPNE1-216ENST00000437340 TMC5Q6UXY8 1006 aa25.29■■□□□ 1.64
CPNE1-216ENST00000437340 HACD2Q6Y1H2 254 aa25.29■■□□□ 1.64
CPNE1-216ENST00000437340 RFLNAQ6ZTI6 216 aa25.29■■□□□ 1.64
CPNE1-216ENST00000437340 NAT14Q8WUY8 206 aa25.29■■□□□ 1.64
CPNE1-216ENST00000437340 ESAMQ96AP7 390 aa25.29■■□□□ 1.64
CPNE1-216ENST00000437340 CDCA3Q99618 268 aaPredicted RBP25.29■■□□□ 1.64
CPNE1-216ENST00000437340 BCAP29Q9UHQ4 241 aa25.29■■□□□ 1.64
CPNE1-216ENST00000437340 BTRCQ9Y297 605 aa25.29■■□□□ 1.64
CPNE1-216ENST00000437340 TIMM22Q9Y584 194 aa25.29■■□□□ 1.64
CPNE1-216ENST00000437340 BBIP1A8MTZ0 92 aa25.28■■□□□ 1.64
CPNE1-216ENST00000437340 MATN4O95460 622 aa25.28■■□□□ 1.64
CPNE1-216ENST00000437340 IDO1P14902 403 aa25.28■■□□□ 1.64
CPNE1-216ENST00000437340 PSMD8P48556 350 aa25.28■■□□□ 1.64
CPNE1-216ENST00000437340 GRIK2Q13002 908 aa25.28■■□□□ 1.64
CPNE1-216ENST00000437340 LRP8Q14114 963 aa25.28■■□□□ 1.64
CPNE1-216ENST00000437340 KIF19Q2TAC6 998 aa25.28■■□□□ 1.64
CPNE1-216ENST00000437340 LRRC73Q5JTD7 316 aa25.28■■□□□ 1.64
CPNE1-216ENST00000437340 CDKL4Q5MAI5 379 aa25.28■■□□□ 1.64
CPNE1-216ENST00000437340 REP15Q6BDI9 236 aa25.28■■□□□ 1.64
CPNE1-216ENST00000437340 GOLGA7Q7Z5G4 137 aa25.28■■□□□ 1.64
CPNE1-216ENST00000437340 HOMEZQ8IX15 550 aa25.28■■□□□ 1.64
CPNE1-216ENST00000437340 MIER2Q8N344 545 aa25.28■■□□□ 1.64
CPNE1-216ENST00000437340 UBTD2Q8WUN7 234 aa25.28■■□□□ 1.64
CPNE1-216ENST00000437340 RSPRY1Q96DX4 576 aa25.28■■□□□ 1.64
CPNE1-216ENST00000437340 FAM83DQ9H4H8 585 aa25.28■■□□□ 1.64
CPNE1-216ENST00000437340 SFXN1Q9H9B4 322 aa25.28■■□□□ 1.64
CPNE1-216ENST00000437340 PCDH12Q9NPG4 1184 aa25.28■■□□□ 1.64
CPNE1-216ENST00000437340 MRPL40Q9NQ50 206 aaKnown RBP25.28■■□□□ 1.64
CPNE1-216ENST00000437340 ST14Q9Y5Y6 855 aa25.28■■□□□ 1.64
CPNE1-216ENST00000437340 FBP2O00757 339 aa25.28■■□□□ 1.64
CPNE1-216ENST00000437340 NRP2O60462 931 aa25.28■■□□□ 1.64
CPNE1-216ENST00000437340 NFATC1O95644 943 aa25.28■■□□□ 1.64
CPNE1-216ENST00000437340 HGFP14210 728 aa25.28■■□□□ 1.64
CPNE1-216ENST00000437340 ST8SIA6P61647 398 aa25.28■■□□□ 1.64
CPNE1-216ENST00000437340 GTF2H2Q13888 395 aa25.28■■□□□ 1.64
CPNE1-216ENST00000437340 GRB7Q14451 532 aa25.28■■□□□ 1.64
CPNE1-216ENST00000437340 GTF2H2CQ6P1K8 395 aa25.28■■□□□ 1.64
CPNE1-216ENST00000437340 BPIFB1Q8TDL5 484 aa25.28■■□□□ 1.64
CPNE1-216ENST00000437340 NRG4Q8WWG1 115 aa25.28■■□□□ 1.64
CPNE1-216ENST00000437340 NOL11Q9H8H0 719 aaKnown RBP25.28■■□□□ 1.64
CPNE1-216ENST00000437340 SDR39U1Q9NRG7 319 aaPredicted RBP25.28■■□□□ 1.64
CPNE1-216ENST00000437340 RIC8BQ9NVN3 520 aa25.28■■□□□ 1.64
CPNE1-216ENST00000437340 ADAMTS6Q9UKP5 1117 aa25.28■■□□□ 1.64
CPNE1-216ENST00000437340 TMPRSS11EQ9UL52 423 aa25.28■■□□□ 1.64
CPNE1-216ENST00000437340 PRRC2BQ5JSZ5 2229 aaKnown RBP25.27■■□□□ 1.64
CPNE1-216ENST00000437340 CFLARO15519 480 aa25.27■■□□□ 1.64
CPNE1-216ENST00000437340 TULP3O75386 442 aa25.27■■□□□ 1.64
CPNE1-216ENST00000437340 OTCP00480 354 aa25.27■■□□□ 1.64
CPNE1-216ENST00000437340 CTSLP07711 333 aa25.27■■□□□ 1.64
CPNE1-216ENST00000437340 ERVPABLB-1P60509 514 aa25.27■■□□□ 1.64
CPNE1-216ENST00000437340 TCEAL5Q5H9L2 206 aa25.27■■□□□ 1.64
CPNE1-216ENST00000437340 TRIM68Q6AZZ1 485 aa25.27■■□□□ 1.64
CPNE1-216ENST00000437340 TLDC1Q6P9B6 456 aa25.27■■□□□ 1.64
CPNE1-216ENST00000437340 PAOXQ6QHF9 649 aa25.27■■□□□ 1.64
CPNE1-216ENST00000437340 DPPA4Q7L190 304 aa25.27■■□□□ 1.64
CPNE1-216ENST00000437340 FUNDC1Q8IVP5 155 aa25.27■■□□□ 1.64
CPNE1-216ENST00000437340 ETFBKMTQ8IXQ9 262 aa25.27■■□□□ 1.64
CPNE1-216ENST00000437340 EFCAB3Q8N7B9 438 aa25.27■■□□□ 1.64
CPNE1-216ENST00000437340 PPFIBP2Q8ND30 876 aa25.27■■□□□ 1.64
CPNE1-216ENST00000437340 RSRC1Q96IZ7 334 aaKnown RBP25.27■■□□□ 1.64
CPNE1-216ENST00000437340 SPATA16Q9BXB7 569 aa25.27■■□□□ 1.64
CPNE1-216ENST00000437340 NSUN3Q9H649 340 aaKnown RBP25.27■■□□□ 1.64
CPNE1-216ENST00000437340 MCM8Q9UJA3 840 aa25.27■■□□□ 1.64
CPNE1-216ENST00000437340 TSR3Q9UJK0 312 aaKnown RBP25.27■■□□□ 1.64
CPNE1-216ENST00000437340 PLXNB3Q9ULL4 1909 aa25.27■■□□□ 1.64
CPNE1-216ENST00000437340 NVLO15381 856 aaKnown RBP25.26■■□□□ 1.63
CPNE1-216ENST00000437340 OR4F21O95013 312 aa25.26■■□□□ 1.63
CPNE1-216ENST00000437340 ATP1B2P14415 290 aaPredicted RBP25.26■■□□□ 1.63
CPNE1-216ENST00000437340 ME2P23368 584 aa25.26■■□□□ 1.63
CPNE1-216ENST00000437340 VIPR2P41587 438 aa25.26■■□□□ 1.63
CPNE1-216ENST00000437340 RGS19P49795 217 aa25.26■■□□□ 1.63
CPNE1-216ENST00000437340 THOP1P52888 689 aa25.26■■□□□ 1.63
CPNE1-216ENST00000437340 PSME3P61289 254 aa25.26■■□□□ 1.63
CPNE1-216ENST00000437340 HYAL1Q12794 435 aa25.26■■□□□ 1.63
CPNE1-216ENST00000437340 GBX1Q14549 363 aa25.26■■□□□ 1.63
CPNE1-216ENST00000437340 TTC23LQ6PF05 361 aa25.26■■□□□ 1.63
CPNE1-216ENST00000437340 HSD11B1LQ7Z5J1 315 aa25.26■■□□□ 1.63
CPNE1-216ENST00000437340 TRAM1L1Q8N609 369 aa25.26■■□□□ 1.63
CPNE1-216ENST00000437340 OR52B6Q8NGF0 335 aa25.26■■□□□ 1.63
CPNE1-216ENST00000437340 SLC26A7Q8TE54 656 aa25.26■■□□□ 1.63
CPNE1-216ENST00000437340 PPP2R3CQ969Q6 453 aa25.26■■□□□ 1.63
CPNE1-216ENST00000437340 RHBDF1Q96CC6 855 aa25.26■■□□□ 1.63
CPNE1-216ENST00000437340 ASB16Q96NS5 453 aa25.26■■□□□ 1.63
CPNE1-216ENST00000437340 ZNF576Q9H609 170 aa25.26■■□□□ 1.63
CPNE1-216ENST00000437340 ELOVL2Q9NXB9 296 aa25.26■■□□□ 1.63
CPNE1-216ENST00000437340 PCDHGA7Q9Y5G6 932 aa25.26■■□□□ 1.63
CPNE1-216ENST00000437340 CFAP99D6REC4 459 aa25.26■■□□□ 1.63
CPNE1-216ENST00000437340 TAPBPO15533 448 aa25.26■■□□□ 1.63
CPNE1-216ENST00000437340 LINC01565O15544 149 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms