RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-208ENST00000436638 CEP112Q8N8E3 955 aa6.15□□□□□ -1.42
ECHDC1-208ENST00000436638 SPATA4Q8NEY3 305 aa6.15□□□□□ -1.42
ECHDC1-208ENST00000436638 LPCAT1Q8NF37 534 aa6.15□□□□□ -1.42
ECHDC1-208ENST00000436638 OR14C36Q8NHC7 312 aa6.15□□□□□ -1.42
ECHDC1-208ENST00000436638 FBXO27Q8NI29 283 aa6.15□□□□□ -1.42
ECHDC1-208ENST00000436638 HCAR2Q8TDS4 363 aa6.15□□□□□ -1.42
ECHDC1-208ENST00000436638 TRPC4APQ8TEL6 797 aa6.15□□□□□ -1.42
ECHDC1-208ENST00000436638 RLN3Q8WXF3 142 aa6.15□□□□□ -1.42
ECHDC1-208ENST00000436638 GATAD2BQ8WXI9 593 aa6.15□□□□□ -1.42
ECHDC1-208ENST00000436638 SLC35B4Q969S0 331 aa6.15□□□□□ -1.42
ECHDC1-208ENST00000436638 ARRDC3Q96B67 414 aa6.15□□□□□ -1.42
ECHDC1-208ENST00000436638 PPP1R14BQ96C90 147 aa6.15□□□□□ -1.42
ECHDC1-208ENST00000436638 RMDN1Q96DB5 314 aa6.15□□□□□ -1.42
ECHDC1-208ENST00000436638 IMP4Q96G21 291 aaKnown RBP6.15□□□□□ -1.42
ECHDC1-208ENST00000436638 CATSPER2Q96P56 530 aa6.15□□□□□ -1.42
ECHDC1-208ENST00000436638 RBM15Q96T37 977 aaKnown RBP eCLIP6.15□□□□□ -1.42
ECHDC1-208ENST00000436638 DPH2Q9BQC3 489 aaPredicted RBP6.15□□□□□ -1.42
ECHDC1-208ENST00000436638 ADGRE3Q9BY15 652 aa6.15□□□□□ -1.42
ECHDC1-208ENST00000436638 DDX47Q9H0S4 455 aaKnown RBP6.15□□□□□ -1.42
ECHDC1-208ENST00000436638 NEUROG2Q9H2A3 272 aa6.15□□□□□ -1.42
ECHDC1-208ENST00000436638 SERHL2Q9H4I8 314 aa6.15□□□□□ -1.42
ECHDC1-208ENST00000436638 CAAP1Q9H8G2 361 aa6.15□□□□□ -1.42
ECHDC1-208ENST00000436638 USP29Q9HBJ7 922 aa6.15□□□□□ -1.42
ECHDC1-208ENST00000436638 SGK2Q9HBY8 427 aa6.15□□□□□ -1.42
ECHDC1-208ENST00000436638 PCDH9Q9HC56 1237 aa6.15□□□□□ -1.42
ECHDC1-208ENST00000436638 VPS45Q9NRW7 570 aa6.15□□□□□ -1.42
ECHDC1-208ENST00000436638 C2orf42Q9NWW7 574 aa6.15□□□□□ -1.42
ECHDC1-208ENST00000436638 ZSCAN32Q9NX65 697 aa6.15□□□□□ -1.42
ECHDC1-208ENST00000436638 UBP1Q9NZI7 540 aa6.15□□□□□ -1.42
ECHDC1-208ENST00000436638 USP36Q9P275 1121 aaKnown RBP6.15□□□□□ -1.42
ECHDC1-208ENST00000436638 ASIC3Q9UHC3 531 aa6.15□□□□□ -1.42
ECHDC1-208ENST00000436638 FZD4Q9ULV1 537 aa6.15□□□□□ -1.42
ECHDC1-208ENST00000436638 PHTF1Q9UMS5 762 aa6.15□□□□□ -1.42
ECHDC1-208ENST00000436638 CHKBQ9Y259 395 aa6.15□□□□□ -1.42
ECHDC1-208ENST00000436638 RAI2Q9Y5P3 530 aa6.15□□□□□ -1.42
ECHDC1-208ENST00000436638 CORINQ9Y5Q5 1042 aa6.15□□□□□ -1.42
ECHDC1-208ENST00000436638 MRFAP1Q9Y605 127 aa6.15□□□□□ -1.42
ECHDC1-208ENST00000436638 TECTAO75443 2155 aa6.14□□□□□ -1.43
ECHDC1-208ENST00000436638 TBC1D3DA0A087WVF3 549 aa6.14□□□□□ -1.43
ECHDC1-208ENST00000436638 TBC1D3IA0A087WXS9 549 aa6.14□□□□□ -1.43
ECHDC1-208ENST00000436638 TBC1D3EA0A087X179 549 aa6.14□□□□□ -1.43
ECHDC1-208ENST00000436638 TBC1D3KA0A087X1G2 549 aa6.14□□□□□ -1.43
ECHDC1-208ENST00000436638 A0A0G2JPF8 293 aa6.14□□□□□ -1.43
ECHDC1-208ENST00000436638 TBC1D3FA6NER0 549 aaPredicted RBP6.14□□□□□ -1.43
ECHDC1-208ENST00000436638 PRR23AA6NEV1 266 aa6.14□□□□□ -1.43
ECHDC1-208ENST00000436638 ERI2A8K979 691 aaKnown RBP6.14□□□□□ -1.43
ECHDC1-208ENST00000436638 UPK3BL1B0FP48 263 aa6.14□□□□□ -1.43
ECHDC1-208ENST00000436638 HNRNPCL3B7ZW38 293 aa6.14□□□□□ -1.43
ECHDC1-208ENST00000436638 TBC1D3LB9A6J9 549 aa6.14□□□□□ -1.43
ECHDC1-208ENST00000436638 UPK3BL2E5RIL1 263 aa6.14□□□□□ -1.43
ECHDC1-208ENST00000436638 MYO1CO00159 1063 aa6.14□□□□□ -1.43
ECHDC1-208ENST00000436638 YKT6O15498 198 aa6.14□□□□□ -1.43
ECHDC1-208ENST00000436638 KLF4O43474 513 aa6.14□□□□□ -1.43
ECHDC1-208ENST00000436638 GJB3O75712 270 aa6.14□□□□□ -1.43
ECHDC1-208ENST00000436638 RPP40O75818 363 aaKnown RBP6.14□□□□□ -1.43
ECHDC1-208ENST00000436638 RHOBTB1O94844 696 aa6.14□□□□□ -1.43
ECHDC1-208ENST00000436638 PCDH8O95206 1070 aa6.14□□□□□ -1.43
ECHDC1-208ENST00000436638 PGLSO95336 258 aa6.14□□□□□ -1.43
ECHDC1-208ENST00000436638 NDST3O95803 873 aa6.14□□□□□ -1.43
ECHDC1-208ENST00000436638 MT-CYBP00156 380 aaPredicted RBP6.14□□□□□ -1.43
ECHDC1-208ENST00000436638 TBC1D3HP0C7X1 549 aa6.14□□□□□ -1.43
ECHDC1-208ENST00000436638 ZSCAN5DPP0CG00 497 aa6.14□□□□□ -1.43
ECHDC1-208ENST00000436638 HNRNPCL4P0DMR1 293 aa6.14□□□□□ -1.43
ECHDC1-208ENST00000436638 PCNAP12004 261 aa6.14□□□□□ -1.43
ECHDC1-208ENST00000436638 ADRB3P13945 408 aa6.14□□□□□ -1.43
ECHDC1-208ENST00000436638 HSD3B1P14060 373 aa6.14□□□□□ -1.43
ECHDC1-208ENST00000436638 ETS1P14921 441 aa6.14□□□□□ -1.43
ECHDC1-208ENST00000436638 TMEM11P17152 192 aa6.14□□□□□ -1.43
ECHDC1-208ENST00000436638 RPL22P35268 128 aaKnown RBP6.14□□□□□ -1.43
ECHDC1-208ENST00000436638 ADCY8P40145 1251 aa6.14□□□□□ -1.43
ECHDC1-208ENST00000436638 P2RY2P41231 377 aa6.14□□□□□ -1.43
ECHDC1-208ENST00000436638 RANBP1P43487 201 aa6.14□□□□□ -1.43
ECHDC1-208ENST00000436638 TPMTP51580 245 aa6.14□□□□□ -1.43
ECHDC1-208ENST00000436638 WNT3AP56704 352 aa6.14□□□□□ -1.43
ECHDC1-208ENST00000436638 RPL26P61254 145 aaKnown RBP6.14□□□□□ -1.43
ECHDC1-208ENST00000436638 CNTN1Q12860 1018 aa6.14□□□□□ -1.43
ECHDC1-208ENST00000436638 TRAP1Q12931 704 aaKnown RBP6.14□□□□□ -1.43
ECHDC1-208ENST00000436638 TRAF2Q12933 501 aa6.14□□□□□ -1.43
ECHDC1-208ENST00000436638 GPS1Q13098 491 aa6.14□□□□□ -1.43
ECHDC1-208ENST00000436638 DHX34Q14147 1143 aaKnown RBP6.14□□□□□ -1.43
ECHDC1-208ENST00000436638 ARHGEF7Q14155 803 aa6.14□□□□□ -1.43
ECHDC1-208ENST00000436638 TRIP13Q15645 432 aaPredicted RBP6.14□□□□□ -1.43
ECHDC1-208ENST00000436638 ZNF528Q3MIS6 628 aa6.14□□□□□ -1.43
ECHDC1-208ENST00000436638 CCDC38Q502W7 563 aa6.14□□□□□ -1.43
ECHDC1-208ENST00000436638 KRBOX4Q5JUW0 171 aa6.14□□□□□ -1.43
ECHDC1-208ENST00000436638 FAXCQ5TGI0 409 aa6.14□□□□□ -1.43
ECHDC1-208ENST00000436638 TBC1D3GQ6DHY5 549 aa6.14□□□□□ -1.43
ECHDC1-208ENST00000436638 TBC1D3CQ6IPX1 549 aa6.14□□□□□ -1.43
ECHDC1-208ENST00000436638 C8orf74Q6P047 294 aa6.14□□□□□ -1.43
ECHDC1-208ENST00000436638 LETMD1Q6P1Q0 360 aa6.14□□□□□ -1.43
ECHDC1-208ENST00000436638 NEK5Q6P3R8 708 aa6.14□□□□□ -1.43
ECHDC1-208ENST00000436638 ZNF574Q6ZN55 896 aaPredicted RBP6.14□□□□□ -1.43
ECHDC1-208ENST00000436638 NCCRP1Q6ZVX7 275 aaPredicted RBP6.14□□□□□ -1.43
ECHDC1-208ENST00000436638 PARS2Q7L3T8 475 aaKnown RBP6.14□□□□□ -1.43
ECHDC1-208ENST00000436638 LINC00523Q86TU6 105 aa6.14□□□□□ -1.43
ECHDC1-208ENST00000436638 PRPF39Q86UA1 669 aaKnown RBP6.14□□□□□ -1.43
ECHDC1-208ENST00000436638 TBC1D3Q8IZP1 549 aaPredicted RBP6.14□□□□□ -1.43
ECHDC1-208ENST00000436638 SLC25A41Q8N5S1 370 aa6.14□□□□□ -1.43
ECHDC1-208ENST00000436638 ZBTB8BQ8NAP8 495 aaPredicted RBP6.14□□□□□ -1.43
ECHDC1-208ENST00000436638 OR6C4Q8NGE1 309 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms