RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 DENND6AQ8IWF6 608 aa15.43■□□□□ 0.06
NEDD4-202ENST00000435532 C12orf76Q8N812 135 aaPredicted RBP15.43■□□□□ 0.06
NEDD4-202ENST00000435532 NXNL1Q96CM4 212 aa15.43■□□□□ 0.06
NEDD4-202ENST00000435532 KLHL1Q9NR64 748 aa15.43■□□□□ 0.06
NEDD4-202ENST00000435532 SERTAD3Q9UJW9 196 aa15.43■□□□□ 0.06
NEDD4-202ENST00000435532 GSRP00390 522 aa15.42■□□□□ 0.06
NEDD4-202ENST00000435532 CDH13P55290 713 aa15.42■□□□□ 0.06
NEDD4-202ENST00000435532 LCP2Q13094 533 aa15.42■□□□□ 0.06
NEDD4-202ENST00000435532 CA9Q16790 459 aa15.42■□□□□ 0.06
NEDD4-202ENST00000435532 GCNT6Q5T4J0 391 aa15.42■□□□□ 0.06
NEDD4-202ENST00000435532 NIPAL1Q6NVV3 410 aa15.42■□□□□ 0.06
NEDD4-202ENST00000435532 TOX2Q96NM4 488 aa15.42■□□□□ 0.06
NEDD4-202ENST00000435532 R3HDM2Q9Y2K5 976 aaKnown RBP15.42■□□□□ 0.06
NEDD4-202ENST00000435532 SNAP91O60641 907 aa15.42■□□□□ 0.06
NEDD4-202ENST00000435532 WFS1O76024 890 aa15.42■□□□□ 0.06
NEDD4-202ENST00000435532 CLCQ05315 142 aa15.42■□□□□ 0.06
NEDD4-202ENST00000435532 ERN2Q76MJ5 926 aaKnown RBP15.42■□□□□ 0.06
NEDD4-202ENST00000435532 LDB1Q86U70 411 aaPredicted RBP15.42■□□□□ 0.06
NEDD4-202ENST00000435532 DEFB119Q8N690 84 aa15.42■□□□□ 0.06
NEDD4-202ENST00000435532 PIK3C3Q8NEB9 887 aa15.42■□□□□ 0.06
NEDD4-202ENST00000435532 C19orf60Q96EN9 201 aa15.42■□□□□ 0.06
NEDD4-202ENST00000435532 CDADC1Q9BWV3 514 aa15.42■□□□□ 0.06
NEDD4-202ENST00000435532 TBC1D23Q9NUY8 699 aa15.42■□□□□ 0.06
NEDD4-202ENST00000435532 ALKBH4Q9NXW9 302 aa15.42■□□□□ 0.06
NEDD4-202ENST00000435532 TEX28O15482 410 aa15.42■□□□□ 0.06
NEDD4-202ENST00000435532 SHBGP04278 402 aa15.42■□□□□ 0.06
NEDD4-202ENST00000435532 ZNF33AQ06730 810 aa15.42■□□□□ 0.06
NEDD4-202ENST00000435532 TOP3AQ13472 1001 aaPredicted RBP15.42■□□□□ 0.06
NEDD4-202ENST00000435532 KRR1Q13601 381 aaKnown RBP15.42■□□□□ 0.06
NEDD4-202ENST00000435532 DNAJB14Q8TBM8 379 aa15.42■□□□□ 0.06
NEDD4-202ENST00000435532 C1orf74Q96LT6 269 aa15.42■□□□□ 0.06
NEDD4-202ENST00000435532 YIPF3Q9GZM5 350 aa15.42■□□□□ 0.06
NEDD4-202ENST00000435532 SLC32A1Q9H598 525 aa15.42■□□□□ 0.06
NEDD4-202ENST00000435532 SIX2Q9NPC8 291 aa15.42■□□□□ 0.06
NEDD4-202ENST00000435532 NFKBIL1Q9UBC1 381 aaPredicted RBP15.42■□□□□ 0.06
NEDD4-202ENST00000435532 UGT2B17O75795 530 aa15.42■□□□□ 0.06
NEDD4-202ENST00000435532 GIMD1P0DJR0 217 aa15.42■□□□□ 0.06
NEDD4-202ENST00000435532 PRPS2P11908 318 aa15.42■□□□□ 0.06
NEDD4-202ENST00000435532 PRG2P13727 222 aa15.42■□□□□ 0.06
NEDD4-202ENST00000435532 RAB33AQ14088 237 aa15.42■□□□□ 0.06
NEDD4-202ENST00000435532 INAQ16352 499 aa15.42■□□□□ 0.06
NEDD4-202ENST00000435532 SLC39A4Q6P5W5 647 aa15.42■□□□□ 0.06
NEDD4-202ENST00000435532 EXOC3L1Q86VI1 746 aa15.42■□□□□ 0.06
NEDD4-202ENST00000435532 VPS35Q96QK1 796 aa15.42■□□□□ 0.06
NEDD4-202ENST00000435532 GPR62Q9BZJ7 368 aa15.42■□□□□ 0.06
NEDD4-202ENST00000435532 NOD2Q9HC29 1040 aa15.42■□□□□ 0.06
NEDD4-202ENST00000435532 PDP2Q9P2J9 529 aa15.42■□□□□ 0.06
NEDD4-202ENST00000435532 TRIM38O00635 465 aa15.42■□□□□ 0.06
NEDD4-202ENST00000435532 TSPAN6O43657 245 aa15.42■□□□□ 0.06
NEDD4-202ENST00000435532 OR10H3O60404 316 aa15.42■□□□□ 0.06
NEDD4-202ENST00000435532 CSNK2BP67870 215 aa15.42■□□□□ 0.06
NEDD4-202ENST00000435532 CCINQ13939 588 aa15.42■□□□□ 0.06
NEDD4-202ENST00000435532 SMYD1Q8NB12 490 aa15.42■□□□□ 0.06
NEDD4-202ENST00000435532 HIC2Q96JB3 615 aa15.42■□□□□ 0.06
NEDD4-202ENST00000435532 MYLK2Q9H1R3 596 aa15.42■□□□□ 0.06
NEDD4-202ENST00000435532 CRTAC1Q9NQ79 661 aa15.42■□□□□ 0.06
NEDD4-202ENST00000435532 ARMCX1Q9P291 453 aa15.42■□□□□ 0.06
NEDD4-202ENST00000435532 FAM221BA6H8Z2 402 aa15.41■□□□□ 0.06
NEDD4-202ENST00000435532 PROCP04070 461 aa15.41■□□□□ 0.06
NEDD4-202ENST00000435532 BPGMP07738 259 aa15.41■□□□□ 0.06
NEDD4-202ENST00000435532 PLGLB1Q02325 96 aa15.41■□□□□ 0.06
NEDD4-202ENST00000435532 RING1Q06587 406 aa15.41■□□□□ 0.06
NEDD4-202ENST00000435532 RTL4Q6ZR62 310 aa15.41■□□□□ 0.06
NEDD4-202ENST00000435532 GALNT7Q86SF2 657 aa15.41■□□□□ 0.06
NEDD4-202ENST00000435532 JAZF1Q86VZ6 243 aa15.41■□□□□ 0.06
NEDD4-202ENST00000435532 CPNE9Q8IYJ1 553 aa15.41■□□□□ 0.06
NEDD4-202ENST00000435532 FAM98AQ8NCA5 519 aaKnown RBP15.41■□□□□ 0.06
NEDD4-202ENST00000435532 RASSF5Q8WWW0 418 aa15.41■□□□□ 0.06
NEDD4-202ENST00000435532 TSSK3Q96PN8 268 aa15.41■□□□□ 0.06
NEDD4-202ENST00000435532 CFL2Q9Y281 166 aa15.41■□□□□ 0.06
NEDD4-202ENST00000435532 SCN11AQ9UI33 1791 aa15.41■□□□□ 0.06
NEDD4-202ENST00000435532 IQCF5A8MTL0 148 aa15.41■□□□□ 0.06
NEDD4-202ENST00000435532 PRR5-ARHGAP8B1AHC4 643 aa15.41■□□□□ 0.06
NEDD4-202ENST00000435532 CLOCKO15516 846 aa15.41■□□□□ 0.06
NEDD4-202ENST00000435532 LAMP2P13473 410 aa15.41■□□□□ 0.06
NEDD4-202ENST00000435532 MLLT1Q03111 559 aaPredicted RBP15.41■□□□□ 0.06
NEDD4-202ENST00000435532 RUNX3Q13761 415 aa15.41■□□□□ 0.06
NEDD4-202ENST00000435532 COLEC12Q5KU26 742 aa15.41■□□□□ 0.06
NEDD4-202ENST00000435532 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.41■□□□□ 0.06
NEDD4-202ENST00000435532 MBOAT1Q6ZNC8 495 aa15.41■□□□□ 0.06
NEDD4-202ENST00000435532 ZBED3Q96IU2 234 aaPredicted RBP15.41■□□□□ 0.06
NEDD4-202ENST00000435532 GALNT8Q9NY28 637 aa15.41■□□□□ 0.06
NEDD4-202ENST00000435532 XKRYO14609 159 aa15.41■□□□□ 0.06
NEDD4-202ENST00000435532 MRPS35P82673 323 aaKnown RBP15.41■□□□□ 0.06
NEDD4-202ENST00000435532 DHRSXQ8N5I4 330 aa15.41■□□□□ 0.06
NEDD4-202ENST00000435532 LRRC4CQ9HCJ2 640 aa15.41■□□□□ 0.06
NEDD4-202ENST00000435532 KLF15Q9UIH9 416 aa15.41■□□□□ 0.06
NEDD4-202ENST00000435532 CLCNKAP51800 687 aa15.41■□□□□ 0.06
NEDD4-202ENST00000435532 DHDDSQ86SQ9 333 aa15.41■□□□□ 0.06
NEDD4-202ENST00000435532 PRSS58Q8IYP2 241 aa15.41■□□□□ 0.06
NEDD4-202ENST00000435532 PIGKQ92643 395 aa15.41■□□□□ 0.06
NEDD4-202ENST00000435532 BATF3Q9NR55 127 aa15.41■□□□□ 0.06
NEDD4-202ENST00000435532 SNX7Q9UNH6 387 aa15.41■□□□□ 0.06
NEDD4-202ENST00000435532 PSMB9P28065 219 aa15.4■□□□□ 0.06
NEDD4-202ENST00000435532 CST5P28325 142 aaPredicted RBP15.4■□□□□ 0.06
NEDD4-202ENST00000435532 ACVRL1P37023 503 aa15.4■□□□□ 0.06
NEDD4-202ENST00000435532 SUOXP51687 545 aa15.4■□□□□ 0.06
NEDD4-202ENST00000435532 SERINC3Q13530 473 aa15.4■□□□□ 0.06
NEDD4-202ENST00000435532 TWIST2Q8WVJ9 160 aa15.4■□□□□ 0.06
NEDD4-202ENST00000435532 MFSD3Q96ES6 412 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms