RNA–Protein interactions for RNA: ENST00000434795.5

CPNE1-213, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-213ENST00000434795 COL6A6A6NMZ7 2263 aa17.5■□□□□ 0.39
CPNE1-213ENST00000434795 GOLGA6L9A6NEM1 432 aa17.5■□□□□ 0.39
CPNE1-213ENST00000434795 LIFP15018 202 aa17.5■□□□□ 0.39
CPNE1-213ENST00000434795 ZNF140P52738 457 aaPredicted RBP17.5■□□□□ 0.39
CPNE1-213ENST00000434795 TXLNBQ8N3L3 684 aa17.5■□□□□ 0.39
CPNE1-213ENST00000434795 RNF10Q8N5U6 811 aaKnown RBP17.5■□□□□ 0.39
CPNE1-213ENST00000434795 OR2L2Q8NH16 312 aa17.5■□□□□ 0.39
CPNE1-213ENST00000434795 ZDHHC12Q96GR4 267 aa17.5■□□□□ 0.39
CPNE1-213ENST00000434795 LINC00615Q96LM1 132 aaPredicted RBP17.5■□□□□ 0.39
CPNE1-213ENST00000434795 FAM96AQ9H5X1 160 aa17.5■□□□□ 0.39
CPNE1-213ENST00000434795 SEMA5BQ9P283 1151 aa17.5■□□□□ 0.39
CPNE1-213ENST00000434795 ACSL5Q9ULC5 683 aa17.5■□□□□ 0.39
CPNE1-213ENST00000434795 B8ZZF3 427 aa17.49■□□□□ 0.39
CPNE1-213ENST00000434795 STK17BO94768 372 aa17.49■□□□□ 0.39
CPNE1-213ENST00000434795 TPH1P17752 444 aa17.49■□□□□ 0.39
CPNE1-213ENST00000434795 AKT1P31749 480 aa17.49■□□□□ 0.39
CPNE1-213ENST00000434795 SEPHS1P49903 392 aa17.49■□□□□ 0.39
CPNE1-213ENST00000434795 GDF10P55107 478 aa17.49■□□□□ 0.39
CPNE1-213ENST00000434795 SH3BP2P78314 561 aa17.49■□□□□ 0.39
CPNE1-213ENST00000434795 TMPRSS15P98073 1019 aa17.49■□□□□ 0.39
CPNE1-213ENST00000434795 BCL7AQ4VC05 210 aa17.49■□□□□ 0.39
CPNE1-213ENST00000434795 CACHD1Q5VU97 1274 aa17.49■□□□□ 0.39
CPNE1-213ENST00000434795 PRSS42Q7Z5A4 293 aa17.49■□□□□ 0.39
CPNE1-213ENST00000434795 SNX20Q7Z614 316 aa17.49■□□□□ 0.39
CPNE1-213ENST00000434795 NLGN4XQ8N0W4 816 aa17.49■□□□□ 0.39
CPNE1-213ENST00000434795 NLGN4YQ8NFZ3 816 aaPredicted RBP17.49■□□□□ 0.39
CPNE1-213ENST00000434795 GPR150Q8NGU9 434 aa17.49■□□□□ 0.39
CPNE1-213ENST00000434795 TMEM121Q9BTD3 319 aa17.49■□□□□ 0.39
CPNE1-213ENST00000434795 ZNF768Q9H5H4 540 aaKnown RBP17.49■□□□□ 0.39
CPNE1-213ENST00000434795 LOC101059948A0A1B0GTJ6 334 aa17.48■□□□□ 0.39
CPNE1-213ENST00000434795 KLHL33A6NCF5 533 aa17.48■□□□□ 0.39
CPNE1-213ENST00000434795 DLGAP3O95886 979 aa17.48■□□□□ 0.39
CPNE1-213ENST00000434795 PLA2G2AP14555 144 aa17.48■□□□□ 0.39
CPNE1-213ENST00000434795 ITGB6P18564 788 aa17.48■□□□□ 0.39
CPNE1-213ENST00000434795 HADHAP40939 763 aa17.48■□□□□ 0.39
CPNE1-213ENST00000434795 CAPZBP47756 277 aa17.48■□□□□ 0.39
CPNE1-213ENST00000434795 CDKN1CP49918 316 aaPredicted RBP17.48■□□□□ 0.39
CPNE1-213ENST00000434795 IL11RAQ14626 422 aa17.48■□□□□ 0.39
CPNE1-213ENST00000434795 CAPRIN2Q6IMN6 1127 aaKnown RBP17.48■□□□□ 0.39
CPNE1-213ENST00000434795 ARHGEF18Q6ZSZ5 1173 aa17.48■□□□□ 0.39
CPNE1-213ENST00000434795 CFAP206Q8IYR0 622 aa17.48■□□□□ 0.39
CPNE1-213ENST00000434795 NXPE1Q8N323 547 aa17.48■□□□□ 0.39
CPNE1-213ENST00000434795 SPDYE1Q8NFV5 336 aaPredicted RBP17.48■□□□□ 0.39
CPNE1-213ENST00000434795 ZFPM2Q8WW38 1151 aa17.48■□□□□ 0.39
CPNE1-213ENST00000434795 ULK4Q96C45 1275 aa17.48■□□□□ 0.39
CPNE1-213ENST00000434795 WWP1Q9H0M0 922 aa17.48■□□□□ 0.39
CPNE1-213ENST00000434795 CAPN6Q9Y6Q1 641 aa17.48■□□□□ 0.39
CPNE1-213ENST00000434795 BOD1L1Q8NFC6 3051 aa17.48■□□□□ 0.39
CPNE1-213ENST00000434795 C17orf113A0A1B0GUU1 675 aa17.47■□□□□ 0.39
CPNE1-213ENST00000434795 H7C0S8 307 aa17.47■□□□□ 0.39
CPNE1-213ENST00000434795 CCL22O00626 93 aa17.47■□□□□ 0.39
CPNE1-213ENST00000434795 PSMD3O43242 534 aa17.47■□□□□ 0.39
CPNE1-213ENST00000434795 RASSF9O75901 435 aa17.47■□□□□ 0.39
CPNE1-213ENST00000434795 PTMAP06454 111 aaKnown RBP17.47■□□□□ 0.39
CPNE1-213ENST00000434795 POLBP06746 335 aa17.47■□□□□ 0.39
CPNE1-213ENST00000434795 MTHFD1P11586 935 aaKnown RBP17.47■□□□□ 0.39
CPNE1-213ENST00000434795 ATP1B2P14415 290 aaPredicted RBP17.47■□□□□ 0.39
CPNE1-213ENST00000434795 ZNF28P17035 718 aa17.47■□□□□ 0.39
CPNE1-213ENST00000434795 NELFEP18615 380 aaKnown RBP17.47■□□□□ 0.39
CPNE1-213ENST00000434795 PSMA3P25788 255 aa17.47■□□□□ 0.39
CPNE1-213ENST00000434795 PBLDP30039 288 aaPredicted RBP17.47■□□□□ 0.39
CPNE1-213ENST00000434795 STIP1P31948 543 aaKnown RBP17.47■□□□□ 0.39
CPNE1-213ENST00000434795 PPP1CAP62136 330 aa17.47■□□□□ 0.39
CPNE1-213ENST00000434795 FOXM1Q08050 763 aa17.47■□□□□ 0.39
CPNE1-213ENST00000434795 ABHD18Q0P651 414 aa17.47■□□□□ 0.39
CPNE1-213ENST00000434795 GPR33Q49SQ1 333 aa17.47■□□□□ 0.39
CPNE1-213ENST00000434795 IRGCQ6NXR0 463 aa17.47■□□□□ 0.39
CPNE1-213ENST00000434795 FAM92BQ6ZTR7 304 aa17.47■□□□□ 0.39
CPNE1-213ENST00000434795 MICALCLQ6ZW33 695 aa17.47■□□□□ 0.39
CPNE1-213ENST00000434795 UNC5BQ8IZJ1 945 aa17.47■□□□□ 0.39
CPNE1-213ENST00000434795 LILRA3Q8N6C8 439 aaPredicted RBP17.47■□□□□ 0.39
CPNE1-213ENST00000434795 HEXDCQ8WVB3 486 aa17.47■□□□□ 0.39
CPNE1-213ENST00000434795 UBE2Q2Q8WVN8 375 aa17.47■□□□□ 0.39
CPNE1-213ENST00000434795 DCUN1D1Q96GG9 259 aa17.47■□□□□ 0.39
CPNE1-213ENST00000434795 CDKN2AIPNLQ96HQ2 116 aa17.47■□□□□ 0.39
CPNE1-213ENST00000434795 SLC45A3Q96JT2 553 aa17.47■□□□□ 0.39
CPNE1-213ENST00000434795 DNAJC1Q96KC8 554 aaKnown RBP17.47■□□□□ 0.39
CPNE1-213ENST00000434795 OR6C1Q96RD1 312 aa17.47■□□□□ 0.39
CPNE1-213ENST00000434795 TRIT1Q9H3H1 467 aaKnown RBP17.47■□□□□ 0.39
CPNE1-213ENST00000434795 LRRC40Q9H9A6 602 aa17.47■□□□□ 0.39
CPNE1-213ENST00000434795 NLE1Q9NVX2 485 aaPredicted RBP17.47■□□□□ 0.39
CPNE1-213ENST00000434795 CRLS1Q9UJA2 301 aa17.47■□□□□ 0.39
CPNE1-213ENST00000434795 CFAP20Q9Y6A4 193 aaKnown RBP17.47■□□□□ 0.39
CPNE1-213ENST00000434795 IGLV3-16A0A075B6K0 115 aa17.46■□□□□ 0.39
CPNE1-213ENST00000434795 IGHV5-51A0A0C4DH38 117 aa17.46■□□□□ 0.39
CPNE1-213ENST00000434795 TRBV5-4A0A0C4DH59 114 aa17.46■□□□□ 0.39
CPNE1-213ENST00000434795 NKX2-8O15522 239 aa17.46■□□□□ 0.39
CPNE1-213ENST00000434795 RALBP11234 206 aa17.46■□□□□ 0.39
CPNE1-213ENST00000434795 FGF5P12034 268 aa17.46■□□□□ 0.39
CPNE1-213ENST00000434795 MC4RP32245 332 aa17.46■□□□□ 0.39
CPNE1-213ENST00000434795 MAP7Q14244 749 aa17.46■□□□□ 0.39
CPNE1-213ENST00000434795 ZNF658BQ4V348 819 aaPredicted RBP17.46■□□□□ 0.39
CPNE1-213ENST00000434795 LRRC45Q96CN5 670 aa17.46■□□□□ 0.39
CPNE1-213ENST00000434795 SLC41A2Q96JW4 573 aa17.46■□□□□ 0.39
CPNE1-213ENST00000434795 COPS8Q99627 209 aa17.46■□□□□ 0.39
CPNE1-213ENST00000434795 ARHGAP9Q9BRR9 750 aa17.46■□□□□ 0.39
CPNE1-213ENST00000434795 CCM2Q9BSQ5 444 aa17.46■□□□□ 0.39
CPNE1-213ENST00000434795 IMP3Q9NV31 184 aaKnown RBP17.46■□□□□ 0.39
CPNE1-213ENST00000434795 ZDHHC3Q9NYG2 299 aa17.46■□□□□ 0.39
CPNE1-213ENST00000434795 IL17BQ9UHF5 180 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms