RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 WBP2Q969T9 261 aa11.64□□□□□ -0.55
CD44-209ENST00000433892 C12orf43Q96C57 262 aaKnown RBP11.64□□□□□ -0.55
CD44-209ENST00000433892 GLT1D1Q96MS3 346 aa11.64□□□□□ -0.55
CD44-209ENST00000433892 TTLL2Q9BWV7 592 aa11.64□□□□□ -0.55
CD44-209ENST00000433892 CXorf21Q9HAI6 301 aa11.64□□□□□ -0.55
CD44-209ENST00000433892 C8orf4Q9NR00 106 aa11.64□□□□□ -0.55
CD44-209ENST00000433892 HEBP1Q9NRV9 189 aa11.64□□□□□ -0.55
CD44-209ENST00000433892 GALNT8Q9NY28 637 aa11.64□□□□□ -0.55
CD44-209ENST00000433892 NUDT4Q9NZJ9 180 aa11.64□□□□□ -0.55
CD44-209ENST00000433892 POLR3HQ9Y535 204 aaPredicted RBP11.64□□□□□ -0.55
CD44-209ENST00000433892 PCDHB7Q9Y5E2 793 aa11.64□□□□□ -0.55
CD44-209ENST00000433892 TMX2-CTNND1H3BSU7 103 aa11.63□□□□□ -0.55
CD44-209ENST00000433892 CA12O43570 354 aa11.63□□□□□ -0.55
CD44-209ENST00000433892 NPPAP01160 153 aa11.63□□□□□ -0.55
CD44-209ENST00000433892 SLC10A3P09131 477 aa11.63□□□□□ -0.55
CD44-209ENST00000433892 ALPIP09923 528 aa11.63□□□□□ -0.55
CD44-209ENST00000433892 GTF2H2Q13888 395 aa11.63□□□□□ -0.55
CD44-209ENST00000433892 FXNQ16595 210 aa11.63□□□□□ -0.55
CD44-209ENST00000433892 HECTD3Q5T447 861 aa11.63□□□□□ -0.55
CD44-209ENST00000433892 CXorf57Q6NSI4 855 aaKnown RBP11.63□□□□□ -0.55
CD44-209ENST00000433892 GTF2H2CQ6P1K8 395 aa11.63□□□□□ -0.55
CD44-209ENST00000433892 SBSNQ6UWP8 590 aa11.63□□□□□ -0.55
CD44-209ENST00000433892 LRRC43Q8N309 656 aa11.63□□□□□ -0.55
CD44-209ENST00000433892 DPP10Q8N608 796 aa11.63□□□□□ -0.55
CD44-209ENST00000433892 BCL7CQ8WUZ0 217 aaPredicted RBP11.63□□□□□ -0.55
CD44-209ENST00000433892 OSCP1Q8WVF1 389 aa11.63□□□□□ -0.55
CD44-209ENST00000433892 CDK5RAP1Q96SZ6 601 aaKnown RBP11.63□□□□□ -0.55
CD44-209ENST00000433892 TTPALQ9BTX7 342 aa11.63□□□□□ -0.55
CD44-209ENST00000433892 BDH2Q9BUT1 245 aa11.63□□□□□ -0.55
CD44-209ENST00000433892 GPR63Q9BZJ6 419 aa11.63□□□□□ -0.55
CD44-209ENST00000433892 P2RY12Q9H244 342 aa11.63□□□□□ -0.55
CD44-209ENST00000433892 NSUN3Q9H649 340 aaKnown RBP11.63□□□□□ -0.55
CD44-209ENST00000433892 IPPKQ9H8X2 491 aa11.63□□□□□ -0.55
CD44-209ENST00000433892 POLR1BQ9H9Y6 1135 aa11.63□□□□□ -0.55
CD44-209ENST00000433892 NTN4Q9HB63 628 aa11.63□□□□□ -0.55
CD44-209ENST00000433892 EVLQ9UI08 416 aaPredicted RBP11.63□□□□□ -0.55
CD44-209ENST00000433892 DHRS7Q9Y394 339 aa11.63□□□□□ -0.55
CD44-209ENST00000433892 PKP3Q9Y446 797 aa11.63□□□□□ -0.55
CD44-209ENST00000433892 PCDHB3Q9Y5E6 796 aa11.63□□□□□ -0.55
CD44-209ENST00000433892 MAGED1Q9Y5V3 778 aaPredicted RBP11.63□□□□□ -0.55
CD44-209ENST00000433892 ST14Q9Y5Y6 855 aa11.63□□□□□ -0.55
CD44-209ENST00000433892 SLC30A1Q9Y6M5 507 aa11.63□□□□□ -0.55
CD44-209ENST00000433892 H7C0S8 307 aa11.63□□□□□ -0.55
CD44-209ENST00000433892 PRMT5O14744 637 aaPredicted RBP11.63□□□□□ -0.55
CD44-209ENST00000433892 BMP1P13497 986 aa11.63□□□□□ -0.55
CD44-209ENST00000433892 PIK3CGP48736 1102 aa11.63□□□□□ -0.55
CD44-209ENST00000433892 HSPA7P48741 367 aa11.63□□□□□ -0.55
CD44-209ENST00000433892 ADARP55265 1226 aaKnown RBP11.63□□□□□ -0.55
CD44-209ENST00000433892 ADGRF1Q5T601 910 aa11.63□□□□□ -0.55
CD44-209ENST00000433892 ATXN7L2Q5T6C5 722 aaPredicted RBP11.63□□□□□ -0.55
CD44-209ENST00000433892 NCEH1Q6PIU2 408 aa11.63□□□□□ -0.55
CD44-209ENST00000433892 ANKS3Q6ZW76 656 aa11.63□□□□□ -0.55
CD44-209ENST00000433892 LYSMD3Q7Z3D4 306 aa11.63□□□□□ -0.55
CD44-209ENST00000433892 RIMKLAQ8IXN7 391 aa11.63□□□□□ -0.55
CD44-209ENST00000433892 PIAS4Q8N2W9 510 aaPredicted RBP11.63□□□□□ -0.55
CD44-209ENST00000433892 FBXO22Q8NEZ5 403 aa11.63□□□□□ -0.55
CD44-209ENST00000433892 DBF4BQ8NFT6 615 aa11.63□□□□□ -0.55
CD44-209ENST00000433892 BPIFB1Q8TDL5 484 aa11.63□□□□□ -0.55
CD44-209ENST00000433892 CGREF1Q99674 301 aa11.63□□□□□ -0.55
CD44-209ENST00000433892 BOCQ9BWV1 1114 aa11.63□□□□□ -0.55
CD44-209ENST00000433892 CIPCQ9C0C6 399 aa11.63□□□□□ -0.55
CD44-209ENST00000433892 RNF38Q9H0F5 515 aa11.63□□□□□ -0.55
CD44-209ENST00000433892 IL17CQ9P0M4 197 aa11.63□□□□□ -0.55
CD44-209ENST00000433892 ZNF639Q9UID6 485 aa11.63□□□□□ -0.55
CD44-209ENST00000433892 MAGEL2Q9UJ55 1249 aa11.63□□□□□ -0.55
CD44-209ENST00000433892 FCF1Q9Y324 198 aaKnown RBP11.63□□□□□ -0.55
CD44-209ENST00000433892 A0A0J9YVX5 310 aa11.62□□□□□ -0.55
CD44-209ENST00000433892 H7C4K7 107 aa11.62□□□□□ -0.55
CD44-209ENST00000433892 ANKRD28O15084 1053 aa11.62□□□□□ -0.55
CD44-209ENST00000433892 FFAR2O15552 330 aa11.62□□□□□ -0.55
CD44-209ENST00000433892 CDH1P12830 882 aa11.62□□□□□ -0.55
CD44-209ENST00000433892 SLC2A4P14672 509 aa11.62□□□□□ -0.55
CD44-209ENST00000433892 NFKBIAP25963 317 aa11.62□□□□□ -0.55
CD44-209ENST00000433892 MZF1P28698 734 aaPredicted RBP11.62□□□□□ -0.55
CD44-209ENST00000433892 CA5AP35218 305 aa11.62□□□□□ -0.55
CD44-209ENST00000433892 GDF5P43026 501 aa11.62□□□□□ -0.55
CD44-209ENST00000433892 ADARB1P78563 741 aaKnown RBP11.62□□□□□ -0.55
CD44-209ENST00000433892 CACNG1Q06432 222 aa11.62□□□□□ -0.55
CD44-209ENST00000433892 SMARCB1Q12824 385 aa11.62□□□□□ -0.55
CD44-209ENST00000433892 PTGR1Q14914 329 aa11.62□□□□□ -0.55
CD44-209ENST00000433892 RAB39AQ14964 217 aa11.62□□□□□ -0.55
CD44-209ENST00000433892 PCBP2Q15366 365 aaKnown RBP eCLIP11.62□□□□□ -0.55
CD44-209ENST00000433892 GPR107Q5VW38 600 aa11.62□□□□□ -0.55
CD44-209ENST00000433892 PTRHD1Q6GMV3 140 aaKnown RBP11.62□□□□□ -0.55
CD44-209ENST00000433892 FAM151BQ6UXP7 276 aa11.62□□□□□ -0.55
CD44-209ENST00000433892 KCTD8Q6ZWB6 473 aa11.62□□□□□ -0.55
CD44-209ENST00000433892 USP51Q70EK9 711 aa11.62□□□□□ -0.55
CD44-209ENST00000433892 MILR1Q7Z6M3 343 aa11.62□□□□□ -0.55
CD44-209ENST00000433892 ADAMTSL2Q86TH1 951 aa11.62□□□□□ -0.55
CD44-209ENST00000433892 CLDN19Q8N6F1 224 aa11.62□□□□□ -0.55
CD44-209ENST00000433892 OR6K2Q8NGY2 324 aa11.62□□□□□ -0.55
CD44-209ENST00000433892 ITFG1Q8TB96 612 aa11.62□□□□□ -0.55
CD44-209ENST00000433892 MUS81Q96NY9 551 aa11.62□□□□□ -0.55
CD44-209ENST00000433892 RETREG1Q9H6L5 497 aa11.62□□□□□ -0.55
CD44-209ENST00000433892 SMPD4Q9NXE4 827 aa11.62□□□□□ -0.55
CD44-209ENST00000433892 ZNF711Q9Y462 761 aa11.62□□□□□ -0.55
CD44-209ENST00000433892 PCDHGA11Q9Y5H2 935 aa11.62□□□□□ -0.55
CD44-209ENST00000433892 TNPO3Q9Y5L0 923 aaKnown RBP11.62□□□□□ -0.55
CD44-209ENST00000433892 H0Y858 1186 aa11.62□□□□□ -0.55
CD44-209ENST00000433892 UPK1AO00322 258 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms