RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 RGS4P49798 205 aa17.95■□□□□ 0.46
HMGN1-206ENST00000431390 CDK3Q00526 305 aa17.95■□□□□ 0.46
HMGN1-206ENST00000431390 BCL7AQ4VC05 210 aa17.95■□□□□ 0.46
HMGN1-206ENST00000431390 ZNF648Q5T619 568 aaPredicted RBP17.95■□□□□ 0.46
HMGN1-206ENST00000431390 ZYG11AQ6WRX3 759 aa17.95■□□□□ 0.46
HMGN1-206ENST00000431390 ADGRG6Q86SQ4 1221 aa17.95■□□□□ 0.46
HMGN1-206ENST00000431390 ISCA2Q86U28 154 aa17.95■□□□□ 0.46
HMGN1-206ENST00000431390 CPNE9Q8IYJ1 553 aa17.95■□□□□ 0.46
HMGN1-206ENST00000431390 RHEBL1Q8TAI7 183 aa17.95■□□□□ 0.46
HMGN1-206ENST00000431390 NAT14Q8WUY8 206 aa17.95■□□□□ 0.46
HMGN1-206ENST00000431390 KLK6Q92876 244 aa17.95■□□□□ 0.46
HMGN1-206ENST00000431390 SGF29Q96ES7 293 aa17.95■□□□□ 0.46
HMGN1-206ENST00000431390 LINGO1Q96FE5 620 aa17.95■□□□□ 0.46
HMGN1-206ENST00000431390 ZNF514Q96K75 400 aaPredicted RBP17.95■□□□□ 0.46
HMGN1-206ENST00000431390 ZNF317Q96PQ6 595 aaPredicted RBP17.95■□□□□ 0.46
HMGN1-206ENST00000431390 HHIPQ96QV1 700 aa17.95■□□□□ 0.46
HMGN1-206ENST00000431390 EPN3Q9H201 632 aa17.95■□□□□ 0.46
HMGN1-206ENST00000431390 MBNL1Q9NR56 388 aaKnown RBP17.95■□□□□ 0.46
HMGN1-206ENST00000431390 CACNA1BQ00975 2339 aa17.94■□□□□ 0.46
HMGN1-206ENST00000431390 GMNCA6NCL1 334 aa17.94■□□□□ 0.46
HMGN1-206ENST00000431390 G3V2L1 256 aa17.94■□□□□ 0.46
HMGN1-206ENST00000431390 KLF11O14901 512 aa17.94■□□□□ 0.46
HMGN1-206ENST00000431390 CDK14O94921 469 aa17.94■□□□□ 0.46
HMGN1-206ENST00000431390 APBB3O95704 486 aa17.94■□□□□ 0.46
HMGN1-206ENST00000431390 MYL2P10916 166 aa17.94■□□□□ 0.46
HMGN1-206ENST00000431390 TAC1P20366 129 aa17.94■□□□□ 0.46
HMGN1-206ENST00000431390 AOAHP28039 575 aa17.94■□□□□ 0.46
HMGN1-206ENST00000431390 ALDH3A1P30838 453 aa17.94■□□□□ 0.46
HMGN1-206ENST00000431390 GTF2H3Q13889 308 aa17.94■□□□□ 0.46
HMGN1-206ENST00000431390 INPP5AQ14642 412 aa17.94■□□□□ 0.46
HMGN1-206ENST00000431390 EEF1AKMT1Q8WVE0 214 aa17.94■□□□□ 0.46
HMGN1-206ENST00000431390 ZNF75CPQ92670 426 aaPredicted RBP17.94■□□□□ 0.46
HMGN1-206ENST00000431390 NELL1Q92832 810 aa17.94■□□□□ 0.46
HMGN1-206ENST00000431390 KIAA1191Q96A73 305 aa17.94■□□□□ 0.46
HMGN1-206ENST00000431390 CHMP6Q96FZ7 201 aa17.94■□□□□ 0.46
HMGN1-206ENST00000431390 MECRQ9BV79 373 aa17.94■□□□□ 0.46
HMGN1-206ENST00000431390 FAM126AQ9BYI3 521 aaPredicted RBP17.94■□□□□ 0.46
HMGN1-206ENST00000431390 WDR26Q9H7D7 661 aa17.94■□□□□ 0.46
HMGN1-206ENST00000431390 MANSC1Q9H8J5 431 aa17.94■□□□□ 0.46
HMGN1-206ENST00000431390 PHPT1Q9NRX4 125 aaPredicted RBP17.94■□□□□ 0.46
HMGN1-206ENST00000431390 CPSF2Q9P2I0 782 aaKnown RBP17.94■□□□□ 0.46
HMGN1-206ENST00000431390 MBD1Q9UIS9 605 aaPredicted RBP17.94■□□□□ 0.46
HMGN1-206ENST00000431390 OR2AG2A6NM03 316 aa17.93■□□□□ 0.46
HMGN1-206ENST00000431390 GPR89AB7ZAQ6 455 aa17.93■□□□□ 0.46
HMGN1-206ENST00000431390 ZBTB14O43829 449 aa17.93■□□□□ 0.46
HMGN1-206ENST00000431390 GSTM1P09488 218 aa17.93■□□□□ 0.46
HMGN1-206ENST00000431390 GPR89BP0CG08 455 aa17.93■□□□□ 0.46
HMGN1-206ENST00000431390 NEFHP12036 1026 aa17.93■□□□□ 0.46
HMGN1-206ENST00000431390 ENO3P13929 434 aaPredicted RBP17.93■□□□□ 0.46
HMGN1-206ENST00000431390 MAT2AP31153 395 aaKnown RBP17.93■□□□□ 0.46
HMGN1-206ENST00000431390 CCR7P32248 378 aa17.93■□□□□ 0.46
HMGN1-206ENST00000431390 IGFALSP35858 605 aa17.93■□□□□ 0.46
HMGN1-206ENST00000431390 CTSCP53634 463 aa17.93■□□□□ 0.46
HMGN1-206ENST00000431390 GSTM4Q03013 218 aa17.93■□□□□ 0.46
HMGN1-206ENST00000431390 GBX1Q14549 363 aa17.93■□□□□ 0.46
HMGN1-206ENST00000431390 PLEKHS1Q5SXH7 462 aa17.93■□□□□ 0.46
HMGN1-206ENST00000431390 TRIM74Q86UV6 250 aa17.93■□□□□ 0.46
HMGN1-206ENST00000431390 SPNS2Q8IVW8 549 aa17.93■□□□□ 0.46
HMGN1-206ENST00000431390 CAMKK1Q8N5S9 505 aa17.93■□□□□ 0.46
HMGN1-206ENST00000431390 SREK1Q8WXA9 508 aaKnown RBP17.93■□□□□ 0.46
HMGN1-206ENST00000431390 PTERQ96BW5 349 aa17.93■□□□□ 0.46
HMGN1-206ENST00000431390 UNKQ9C0B0 810 aaKnown RBP17.93■□□□□ 0.46
HMGN1-206ENST00000431390 OR2AG1Q9H205 316 aa17.93■□□□□ 0.46
HMGN1-206ENST00000431390 PRMT8Q9NR22 394 aaPredicted RBP17.93■□□□□ 0.46
HMGN1-206ENST00000431390 ATXN10Q9UBB4 475 aa17.93■□□□□ 0.46
HMGN1-206ENST00000431390 GPR34Q9UPC5 381 aa17.93■□□□□ 0.46
HMGN1-206ENST00000431390 TCP11X1B4DZS4 312 aa17.92■□□□□ 0.46
HMGN1-206ENST00000431390 RAD51BO15315 384 aa17.92■□□□□ 0.46
HMGN1-206ENST00000431390 LATO43561 262 aa17.92■□□□□ 0.46
HMGN1-206ENST00000431390 BGNP21810 368 aa17.92■□□□□ 0.46
HMGN1-206ENST00000431390 KCNA4P22459 653 aa17.92■□□□□ 0.46
HMGN1-206ENST00000431390 CCR5P51681 352 aa17.92■□□□□ 0.46
HMGN1-206ENST00000431390 PRKAA2P54646 552 aa17.92■□□□□ 0.46
HMGN1-206ENST00000431390 TMEM220Q6QAJ8 160 aa17.92■□□□□ 0.46
HMGN1-206ENST00000431390 C10orf107Q8IVU9 208 aa17.92■□□□□ 0.46
HMGN1-206ENST00000431390 STAG3L4Q8TBR4 150 aa17.92■□□□□ 0.46
HMGN1-206ENST00000431390 CCDC126Q96EE4 140 aa17.92■□□□□ 0.46
HMGN1-206ENST00000431390 CCM2Q9BSQ5 444 aa17.92■□□□□ 0.46
HMGN1-206ENST00000431390 ALG9Q9H6U8 611 aa17.92■□□□□ 0.46
HMGN1-206ENST00000431390 WSB2Q9NYS7 404 aaPredicted RBP17.92■□□□□ 0.46
HMGN1-206ENST00000431390 CDV3Q9UKY7 258 aaKnown RBP17.92■□□□□ 0.46
HMGN1-206ENST00000431390 CYP8B1Q9UNU6 501 aa17.92■□□□□ 0.46
HMGN1-206ENST00000431390 RALGAPA1Q6GYQ0 2036 aa17.92■□□□□ 0.46
HMGN1-206ENST00000431390 KERAO60938 352 aa17.91■□□□□ 0.46
HMGN1-206ENST00000431390 MYCLP1P12525 358 aaPredicted RBP17.91■□□□□ 0.46
HMGN1-206ENST00000431390 HNRNPA2B1P22626 353 aaKnown RBP17.91■□□□□ 0.46
HMGN1-206ENST00000431390 CD6P30203 668 aa17.91■□□□□ 0.46
HMGN1-206ENST00000431390 MTAPQ13126 283 aa17.91■□□□□ 0.46
HMGN1-206ENST00000431390 TERF2Q15554 542 aa17.91■□□□□ 0.46
HMGN1-206ENST00000431390 ACSBG2Q5FVE4 666 aa17.91■□□□□ 0.46
HMGN1-206ENST00000431390 ATG16L1Q676U5 607 aa17.91■□□□□ 0.46
HMGN1-206ENST00000431390 MAMSTRQ6ZN01 415 aa17.91■□□□□ 0.46
HMGN1-206ENST00000431390 MYO1HQ8N1T3 1032 aa17.91■□□□□ 0.46
HMGN1-206ENST00000431390 ASZ1Q8WWH4 475 aa17.91■□□□□ 0.46
HMGN1-206ENST00000431390 TOE1Q96GM8 510 aaKnown RBP17.91■□□□□ 0.46
HMGN1-206ENST00000431390 LINC00615Q96LM1 132 aaPredicted RBP17.91■□□□□ 0.46
HMGN1-206ENST00000431390 OXSMQ9NWU1 459 aa17.91■□□□□ 0.46
HMGN1-206ENST00000431390 BTN3A1O00481 513 aa17.91■□□□□ 0.46
HMGN1-206ENST00000431390 CHUKO15111 745 aa17.91■□□□□ 0.46
HMGN1-206ENST00000431390 SLC31A1O15431 190 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms