RNA–Protein interactions for RNA: ENST00000430627.6

CDK12-201, Transcript of cyclin dependent kinase 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK12, Length 5,918 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-201ENST00000430627 DNAJA3Q96EY1 480 aa13.17□□□□□ -0.3
CDK12-201ENST00000430627 TMEM68Q96MH6 324 aa13.17□□□□□ -0.3
CDK12-201ENST00000430627 PLGRKTQ9HBL7 147 aa13.17□□□□□ -0.3
CDK12-201ENST00000430627 DIABLOQ9NR28 239 aa13.17□□□□□ -0.3
CDK12-201ENST00000430627 SEC14L3Q9UDX4 400 aa13.17□□□□□ -0.3
CDK12-201ENST00000430627 MAFFQ9ULX9 164 aa13.17□□□□□ -0.3
CDK12-201ENST00000430627 INSL5Q9Y5Q6 135 aa13.17□□□□□ -0.3
CDK12-201ENST00000430627 SLCO1B7G3V0H7 640 aa13.17□□□□□ -0.3
CDK12-201ENST00000430627 DLX3O60479 287 aa13.17□□□□□ -0.3
CDK12-201ENST00000430627 SLC10A3P09131 477 aa13.17□□□□□ -0.3
CDK12-201ENST00000430627 OR4D2P58180 307 aa13.17□□□□□ -0.3
CDK12-201ENST00000430627 VSX2P58304 361 aaPredicted RBP13.17□□□□□ -0.3
CDK12-201ENST00000430627 CLRN1P58418 232 aa13.17□□□□□ -0.3
CDK12-201ENST00000430627 SMIM11AP58511 58 aa13.17□□□□□ -0.3
CDK12-201ENST00000430627 PXYLP1Q8TE99 480 aa13.17□□□□□ -0.3
CDK12-201ENST00000430627 PTCD2Q8WV60 388 aaKnown RBP13.17□□□□□ -0.3
CDK12-201ENST00000430627 HMCESQ96FZ2 354 aa13.17□□□□□ -0.3
CDK12-201ENST00000430627 TSPAN18Q96SJ8 248 aa13.17□□□□□ -0.3
CDK12-201ENST00000430627 TMEM121BQ9BXQ6 578 aaPredicted RBP13.17□□□□□ -0.3
CDK12-201ENST00000430627 IL22Q9GZX6 179 aa13.17□□□□□ -0.3
CDK12-201ENST00000430627 ADAM18Q9Y3Q7 739 aa13.17□□□□□ -0.3
CDK12-201ENST00000430627 DGKBQ9Y6T7 804 aa13.17□□□□□ -0.3
CDK12-201ENST00000430627 TIMP1P01033 207 aa13.17□□□□□ -0.3
CDK12-201ENST00000430627 MTHFD1P11586 935 aaKnown RBP13.17□□□□□ -0.3
CDK12-201ENST00000430627 NKAPLQ5M9Q1 402 aa13.17□□□□□ -0.3
CDK12-201ENST00000430627 UBXN10Q96LJ8 280 aa13.17□□□□□ -0.3
CDK12-201ENST00000430627 TMEM209Q96SK2 561 aa13.17□□□□□ -0.3
CDK12-201ENST00000430627 SNRNP25Q9BV90 132 aaKnown RBP13.17□□□□□ -0.3
CDK12-201ENST00000430627 GPN2Q9H9Y4 310 aaPredicted RBP13.17□□□□□ -0.3
CDK12-201ENST00000430627 TMEM120BA0PK00 339 aa13.16□□□□□ -0.3
CDK12-201ENST00000430627 EFCAB10A6NFE3 127 aa13.16□□□□□ -0.3
CDK12-201ENST00000430627 TPST2O60704 377 aa13.16□□□□□ -0.3
CDK12-201ENST00000430627 RENP00797 406 aa13.16□□□□□ -0.3
CDK12-201ENST00000430627 LINC00032P0C843 101 aa13.16□□□□□ -0.3
CDK12-201ENST00000430627 HK2P52789 917 aa13.16□□□□□ -0.3
CDK12-201ENST00000430627 AQP5P55064 265 aa13.16□□□□□ -0.3
CDK12-201ENST00000430627 HNRNPKP61978 463 aaKnown RBP eCLIP13.16□□□□□ -0.3
CDK12-201ENST00000430627 DEFB133Q30KQ1 61 aa13.16□□□□□ -0.3
CDK12-201ENST00000430627 KLHL17Q6TDP4 642 aa13.16□□□□□ -0.3
CDK12-201ENST00000430627 ZNF433Q8N7K0 673 aaPredicted RBP13.16□□□□□ -0.3
CDK12-201ENST00000430627 FAM122AQ96E09 287 aa13.16□□□□□ -0.3
CDK12-201ENST00000430627 C1QTNF1Q9BXJ1 281 aa13.16□□□□□ -0.3
CDK12-201ENST00000430627 UGT2B28Q9BY64 529 aa13.16□□□□□ -0.3
CDK12-201ENST00000430627 PXDNLA1KZ92 1463 aa13.16□□□□□ -0.3
CDK12-201ENST00000430627 CEP152O94986 1710 aa13.16□□□□□ -0.3
CDK12-201ENST00000430627 GATBO75879 557 aaKnown RBP13.16□□□□□ -0.3
CDK12-201ENST00000430627 ZNF806P0C7X5 589 aa13.16□□□□□ -0.3
CDK12-201ENST00000430627 ILF2Q12905 390 aaKnown RBP13.16□□□□□ -0.3
CDK12-201ENST00000430627 UGCGQ16739 394 aa13.16□□□□□ -0.3
CDK12-201ENST00000430627 CCDC153Q494R4 210 aa13.16□□□□□ -0.3
CDK12-201ENST00000430627 TPCN2Q8NHX9 752 aa13.16□□□□□ -0.3
CDK12-201ENST00000430627 APOL4Q9BPW4 351 aa13.16□□□□□ -0.3
CDK12-201ENST00000430627 NOD2Q9HC29 1040 aa13.16□□□□□ -0.3
CDK12-201ENST00000430627 ZNF490Q9ULM2 529 aaPredicted RBP13.16□□□□□ -0.3
CDK12-201ENST00000430627 CAMK2AQ9UQM7 478 aa13.16□□□□□ -0.3
CDK12-201ENST00000430627 RAD51CO43502 376 aa13.16□□□□□ -0.3
CDK12-201ENST00000430627 SLC11A1P49279 550 aa13.16□□□□□ -0.3
CDK12-201ENST00000430627 NCBP2P52298 156 aaKnown RBP eCLIP13.16□□□□□ -0.3
CDK12-201ENST00000430627 DGKQP52824 942 aa13.16□□□□□ -0.3
CDK12-201ENST00000430627 ENPP2Q13822 863 aa13.16□□□□□ -0.3
CDK12-201ENST00000430627 ZNF549Q6P9A3 640 aa13.16□□□□□ -0.3
CDK12-201ENST00000430627 WDR59Q6PJI9 974 aa13.16□□□□□ -0.3
CDK12-201ENST00000430627 USP49Q70CQ1 688 aa13.16□□□□□ -0.3
CDK12-201ENST00000430627 SLC26A11Q86WA9 606 aa13.16□□□□□ -0.3
CDK12-201ENST00000430627 CCDC116Q8IYX3 515 aa13.16□□□□□ -0.3
CDK12-201ENST00000430627 PHC3Q8NDX5 983 aa13.16□□□□□ -0.3
CDK12-201ENST00000430627 OR14L1PQ8NHC6 308 aa13.16□□□□□ -0.3
CDK12-201ENST00000430627 C8orf48Q96LL4 319 aa13.16□□□□□ -0.3
CDK12-201ENST00000430627 NSMCE3Q96MG7 304 aa13.16□□□□□ -0.3
CDK12-201ENST00000430627 QKIQ96PU8 341 aaKnown RBP eCLIP13.16□□□□□ -0.36e-6■■■■□ 20.5
CDK12-201ENST00000430627 NELL2Q99435 816 aa13.16□□□□□ -0.3
CDK12-201ENST00000430627 NPAS2Q99743 824 aa13.16□□□□□ -0.3
CDK12-201ENST00000430627 TRPS1Q9UHF7 1281 aa13.16□□□□□ -0.3
CDK12-201ENST00000430627 PHTF1Q9UMS5 762 aa13.16□□□□□ -0.3
CDK12-201ENST00000430627 CCR3P51677 355 aa13.16□□□□□ -0.3
CDK12-201ENST00000430627 PTPN5P54829 565 aa13.16□□□□□ -0.3
CDK12-201ENST00000430627 DSG2Q14126 1118 aa13.16□□□□□ -0.3
CDK12-201ENST00000430627 C6orf62Q9GZU0 229 aaPredicted RBP13.16□□□□□ -0.3
CDK12-201ENST00000430627 TMPRSS11EQ9UL52 423 aa13.16□□□□□ -0.3
CDK12-201ENST00000430627 SYNPO2Q9UMS6 1093 aa13.16□□□□□ -0.3
CDK12-201ENST00000430627 C3orf38Q5JPI3 329 aa13.15□□□□□ -0.3
CDK12-201ENST00000430627 SPIN3Q5JUX0 258 aa13.15□□□□□ -0.3
CDK12-201ENST00000430627 SMARCD3Q6STE5 483 aa13.15□□□□□ -0.3
CDK12-201ENST00000430627 RANBP3LQ86VV4 465 aaPredicted RBP13.15□□□□□ -0.3
CDK12-201ENST00000430627 LRRC20Q8TCA0 184 aa13.15□□□□□ -0.3
CDK12-201ENST00000430627 NARS2Q96I59 477 aaKnown RBP13.15□□□□□ -0.3
CDK12-201ENST00000430627 NOL6Q9H6R4 1146 aaKnown RBP13.15□□□□□ -0.3
CDK12-201ENST00000430627 IL17RBQ9NRM6 502 aa13.15□□□□□ -0.3
CDK12-201ENST00000430627 MGAT4AQ9UM21 535 aa13.15□□□□□ -0.3
CDK12-201ENST00000430627 GRXCR1A8MXD5 290 aa13.15□□□□□ -0.3
CDK12-201ENST00000430627 AKAP3O75969 853 aa13.15□□□□□ -0.3
CDK12-201ENST00000430627 TFEBP19484 476 aa13.15□□□□□ -0.3
CDK12-201ENST00000430627 STX12Q86Y82 276 aa13.15□□□□□ -0.3
CDK12-201ENST00000430627 PARP9Q8IXQ6 854 aa13.15□□□□□ -0.3
CDK12-201ENST00000430627 CMTM8Q8IZV2 173 aa13.15□□□□□ -0.3
CDK12-201ENST00000430627 ASB15Q8WXK1 588 aa13.15□□□□□ -0.3
CDK12-201ENST00000430627 CLN6Q9NWW5 311 aa13.15□□□□□ -0.3
CDK12-201ENST00000430627 SLC39A1Q9NY26 324 aa13.15□□□□□ -0.3
CDK12-201ENST00000430627 LOC102724159A0A0B4J2E5 919 aa13.15□□□□□ -0.3
CDK12-201ENST00000430627 HSPA12AO43301 675 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms