RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 BST1Q10588 318 aa8.73□□□□□ -1.01
SMC6-204ENST00000428868 SGCGQ13326 291 aa8.73□□□□□ -1.01
SMC6-204ENST00000428868 ACAP2Q15057 778 aa8.73□□□□□ -1.01
SMC6-204ENST00000428868 TERF2Q15554 542 aa8.73□□□□□ -1.01
SMC6-204ENST00000428868 FAM83EQ2M2I3 478 aa8.73□□□□□ -1.01
SMC6-204ENST00000428868 C18orf21Q32NC0 220 aaPredicted RBP8.73□□□□□ -1.01
SMC6-204ENST00000428868 MAP7D1Q3KQU3 841 aa8.73□□□□□ -1.01
SMC6-204ENST00000428868 AGAP9Q5VTM2 703 aa8.73□□□□□ -1.01
SMC6-204ENST00000428868 CYHR1Q6ZMK1 362 aa8.73□□□□□ -1.01
SMC6-204ENST00000428868 GCNT7Q6ZNI0 430 aa8.73□□□□□ -1.01
SMC6-204ENST00000428868 FAM83HQ6ZRV2 1179 aaPredicted RBP8.73□□□□□ -1.01
SMC6-204ENST00000428868 C11orf96Q7Z7L8 435 aa8.73□□□□□ -1.01
SMC6-204ENST00000428868 TRIM69Q86WT6 500 aa8.73□□□□□ -1.01
SMC6-204ENST00000428868 NUDCD3Q8IVD9 361 aa8.73□□□□□ -1.01
SMC6-204ENST00000428868 SPEM1Q8N4L4 309 aa8.73□□□□□ -1.01
SMC6-204ENST00000428868 OR6Y1Q8NGX8 325 aa8.73□□□□□ -1.01
SMC6-204ENST00000428868 LRRC8CQ8TDW0 803 aa8.73□□□□□ -1.01
SMC6-204ENST00000428868 ELMO1Q92556 727 aa8.73□□□□□ -1.01
SMC6-204ENST00000428868 DLG3Q92796 817 aa8.73□□□□□ -1.01
SMC6-204ENST00000428868 THOC1Q96FV9 657 aaKnown RBP8.73□□□□□ -1.01
SMC6-204ENST00000428868 TSNARE1Q96NA8 513 aa8.73□□□□□ -1.01
SMC6-204ENST00000428868 TMEM237Q96Q45 408 aa8.73□□□□□ -1.01
SMC6-204ENST00000428868 MRPL57Q9BQC6 102 aaKnown RBP8.73□□□□□ -1.01
SMC6-204ENST00000428868 GATA5Q9BWX5 397 aaPredicted RBP8.73□□□□□ -1.01
SMC6-204ENST00000428868 GPR174Q9BXC1 333 aa8.73□□□□□ -1.01
SMC6-204ENST00000428868 TEX101Q9BY14 249 aa8.73□□□□□ -1.01
SMC6-204ENST00000428868 FAM107BQ9H098 131 aa8.73□□□□□ -1.01
SMC6-204ENST00000428868 MRPL46Q9H2W6 279 aaKnown RBP8.73□□□□□ -1.01
SMC6-204ENST00000428868 SGK2Q9HBY8 427 aa8.73□□□□□ -1.01
SMC6-204ENST00000428868 TRIM39Q9HCM9 518 aa8.73□□□□□ -1.01
SMC6-204ENST00000428868 MRPL40Q9NQ50 206 aaKnown RBP8.73□□□□□ -1.01
SMC6-204ENST00000428868 LATS2Q9NRM7 1088 aa8.73□□□□□ -1.01
SMC6-204ENST00000428868 SPATS2LQ9NUQ6 558 aaKnown RBP8.73□□□□□ -1.01
SMC6-204ENST00000428868 PSD3Q9NYI0 1048 aa8.73□□□□□ -1.01
SMC6-204ENST00000428868 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.73□□□□□ -1.01
SMC6-204ENST00000428868 SLC23A2Q9UGH3 650 aa8.73□□□□□ -1.01
SMC6-204ENST00000428868 PNMA8BQ9ULN7 279 aaPredicted RBP8.73□□□□□ -1.01
SMC6-204ENST00000428868 PLEKHM1Q9Y4G2 1056 aa8.73□□□□□ -1.01
SMC6-204ENST00000428868 GMNCA6NCL1 334 aa8.72□□□□□ -1.01
SMC6-204ENST00000428868 NCF1BA6NI72 391 aaPredicted RBP8.72□□□□□ -1.01
SMC6-204ENST00000428868 LRRC72A6NJI9 287 aa8.72□□□□□ -1.01
SMC6-204ENST00000428868 NCF1CA8MVU1 366 aaPredicted RBP8.72□□□□□ -1.01
SMC6-204ENST00000428868 CFAP99D6REC4 459 aa8.72□□□□□ -1.01
SMC6-204ENST00000428868 BIRC5O15392 142 aa8.72□□□□□ -1.01
SMC6-204ENST00000428868 LATO43561 262 aa8.72□□□□□ -1.01
SMC6-204ENST00000428868 RRP9O43818 475 aaKnown RBP8.72□□□□□ -1.01
SMC6-204ENST00000428868 ATG13O75143 517 aa8.72□□□□□ -1.01
SMC6-204ENST00000428868 GPC4O75487 556 aa8.72□□□□□ -1.01
SMC6-204ENST00000428868 CDK14O94921 469 aa8.72□□□□□ -1.01
SMC6-204ENST00000428868 FSBPO95073 299 aa8.72□□□□□ -1.01
SMC6-204ENST00000428868 VIMP08670 466 aaKnown RBP8.72□□□□□ -1.01
SMC6-204ENST00000428868 RALBP11234 206 aa8.72□□□□□ -1.01
SMC6-204ENST00000428868 NCF1P14598 390 aaPredicted RBP8.72□□□□□ -1.01
SMC6-204ENST00000428868 BCKDHBP21953 392 aa8.72□□□□□ -1.01
SMC6-204ENST00000428868 PDHA2P29803 388 aa8.72□□□□□ -1.01
SMC6-204ENST00000428868 TRIM23P36406 574 aa8.72□□□□□ -1.01
SMC6-204ENST00000428868 SLC26A3P40879 764 aa8.72□□□□□ -1.01
SMC6-204ENST00000428868 RPS9P46781 194 aaKnown RBP8.72□□□□□ -1.01
SMC6-204ENST00000428868 IL2P60568 153 aa8.72□□□□□ -1.01
SMC6-204ENST00000428868 CCDC15Q0P6D6 951 aa8.72□□□□□ -1.01
SMC6-204ENST00000428868 HSPA14Q0VDF9 509 aa8.72□□□□□ -1.01
SMC6-204ENST00000428868 OVGP1Q12889 678 aa8.72□□□□□ -1.01
SMC6-204ENST00000428868 NFE2L1Q14494 772 aa8.72□□□□□ -1.01
SMC6-204ENST00000428868 PHKG1Q16816 387 aa8.72□□□□□ -1.01
SMC6-204ENST00000428868 PPP1R3AQ16821 1122 aa8.72□□□□□ -1.01
SMC6-204ENST00000428868 BCL7AQ4VC05 210 aa8.72□□□□□ -1.01
SMC6-204ENST00000428868 KIAA0895LQ68EN5 471 aa8.72□□□□□ -1.01
SMC6-204ENST00000428868 TSSK4Q6SA08 328 aa8.72□□□□□ -1.01
SMC6-204ENST00000428868 SBSNQ6UWP8 590 aa8.72□□□□□ -1.01
SMC6-204ENST00000428868 MBOAT1Q6ZNC8 495 aa8.72□□□□□ -1.01
SMC6-204ENST00000428868 RGS9BPQ6ZS82 235 aa8.72□□□□□ -1.01
SMC6-204ENST00000428868 OTOAQ7RTW8 1153 aa8.72□□□□□ -1.01
SMC6-204ENST00000428868 LCA5Q86VQ0 697 aa8.72□□□□□ -1.01
SMC6-204ENST00000428868 TRAPPC5Q8IUR0 188 aa8.72□□□□□ -1.01
SMC6-204ENST00000428868 NKAPQ8N5F7 415 aaKnown RBP8.72□□□□□ -1.01
SMC6-204ENST00000428868 KIAA1191Q96A73 305 aa8.72□□□□□ -1.01
SMC6-204ENST00000428868 CHMP6Q96FZ7 201 aa8.72□□□□□ -1.01
SMC6-204ENST00000428868 BMFQ96LC9 184 aa8.72□□□□□ -1.01
SMC6-204ENST00000428868 PANX3Q96QZ0 392 aa8.72□□□□□ -1.01
SMC6-204ENST00000428868 NELL2Q99435 816 aa8.72□□□□□ -1.01
SMC6-204ENST00000428868 ORAI3Q9BRQ5 295 aa8.72□□□□□ -1.01
SMC6-204ENST00000428868 APOOQ9BUR5 198 aa8.72□□□□□ -1.01
SMC6-204ENST00000428868 EPN3Q9H201 632 aa8.72□□□□□ -1.01
SMC6-204ENST00000428868 KDM4CQ9H3R0 1056 aa8.72□□□□□ -1.01
SMC6-204ENST00000428868 TFB2MQ9H5Q4 396 aaKnown RBP8.72□□□□□ -1.01
SMC6-204ENST00000428868 WDR26Q9H7D7 661 aa8.72□□□□□ -1.01
SMC6-204ENST00000428868 MANSC1Q9H8J5 431 aa8.72□□□□□ -1.01
SMC6-204ENST00000428868 SYTL2Q9HCH5 934 aa8.72□□□□□ -1.01
SMC6-204ENST00000428868 OXSMQ9NWU1 459 aa8.72□□□□□ -1.01
SMC6-204ENST00000428868 KCTD5Q9NXV2 234 aa8.72□□□□□ -1.01
SMC6-204ENST00000428868 SIT1Q9Y3P8 196 aa8.72□□□□□ -1.01
SMC6-204ENST00000428868 ASB1Q9Y576 335 aa8.72□□□□□ -1.01
SMC6-204ENST00000428868 MDC1Q14676 2089 aaKnown RBP8.72□□□□□ -1.01
SMC6-204ENST00000428868 SDK1Q7Z5N4 2213 aa8.72□□□□□ -1.01
SMC6-204ENST00000428868 RALGAPA1Q6GYQ0 2036 aa8.71□□□□□ -1.01
SMC6-204ENST00000428868 SLC5A10A0PJK1 596 aa8.71□□□□□ -1.02
SMC6-204ENST00000428868 SUPT3HB4E1H0 165 aa8.71□□□□□ -1.02
SMC6-204ENST00000428868 CHUKO15111 745 aa8.71□□□□□ -1.02
SMC6-204ENST00000428868 NUAK1O60285 661 aa8.71□□□□□ -1.02
SMC6-204ENST00000428868 MAGEC1O60732 1142 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms