RNA–Protein interactions for RNA: ENST00000428830.6

CHEK1-203, Transcript of checkpoint kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHEK1, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-203ENST00000428830 ATP5F1P24539 256 aaPredicted RBP12.7□□□□□ -0.38
CHEK1-203ENST00000428830 CXCL12P48061 93 aa12.7□□□□□ -0.38
CHEK1-203ENST00000428830 KCNC1P48547 511 aa12.7□□□□□ -0.38
CHEK1-203ENST00000428830 CCR5P51681 352 aa12.7□□□□□ -0.38
CHEK1-203ENST00000428830 GBX1Q14549 363 aa12.7□□□□□ -0.38
CHEK1-203ENST00000428830 TSNQ15631 228 aaKnown RBP12.7□□□□□ -0.38
CHEK1-203ENST00000428830 ATG16L1Q676U5 607 aa12.7□□□□□ -0.38
CHEK1-203ENST00000428830 DOK6Q6PKX4 331 aa12.7□□□□□ -0.38
CHEK1-203ENST00000428830 ADAMTSL2Q86TH1 951 aa12.7□□□□□ -0.38
CHEK1-203ENST00000428830 FOXJ1Q92949 421 aa12.7□□□□□ -0.38
CHEK1-203ENST00000428830 CCDC126Q96EE4 140 aa12.7□□□□□ -0.38
CHEK1-203ENST00000428830 ATOH8Q96SQ7 321 aa12.7□□□□□ -0.38
CHEK1-203ENST00000428830 C6orf106Q9H6K1 298 aaPredicted RBP12.7□□□□□ -0.38
CHEK1-203ENST00000428830 RNF112Q9ULX5 631 aa12.7□□□□□ -0.38
CHEK1-203ENST00000428830 IGHV1OR15-9A0A0B4J2B8 117 aa12.69□□□□□ -0.38
CHEK1-203ENST00000428830 TMEM202A6NGA9 273 aa12.69□□□□□ -0.38
CHEK1-203ENST00000428830 SYCE1LA8MT33 242 aa12.69□□□□□ -0.38
CHEK1-203ENST00000428830 FPGTO14772 594 aa12.69□□□□□ -0.38
CHEK1-203ENST00000428830 NUAK1O60285 661 aa12.69□□□□□ -0.38
CHEK1-203ENST00000428830 DLX3O60479 287 aa12.69□□□□□ -0.38
CHEK1-203ENST00000428830 TRIM13O60858 407 aa12.69□□□□□ -0.38
CHEK1-203ENST00000428830 GSTM1P09488 218 aa12.69□□□□□ -0.38
CHEK1-203ENST00000428830 GRK2P25098 689 aa12.69□□□□□ -0.38
CHEK1-203ENST00000428830 MAGEA9P43362 315 aa12.69□□□□□ -0.38
CHEK1-203ENST00000428830 PXNP49023 591 aaPredicted RBP12.69□□□□□ -0.38
CHEK1-203ENST00000428830 PRKAA2P54646 552 aa12.69□□□□□ -0.38
CHEK1-203ENST00000428830 GSTM4Q03013 218 aa12.69□□□□□ -0.38
CHEK1-203ENST00000428830 SYTL3Q4VX76 610 aa12.69□□□□□ -0.38
CHEK1-203ENST00000428830 LIPMQ5VYY2 423 aa12.69□□□□□ -0.38
CHEK1-203ENST00000428830 KIAA0895LQ68EN5 471 aa12.69□□□□□ -0.38
CHEK1-203ENST00000428830 ZCCHC23Q6ZST2 131 aa12.69□□□□□ -0.38
CHEK1-203ENST00000428830 ZNF547Q8IVP9 402 aa12.69□□□□□ -0.38
CHEK1-203ENST00000428830 LRRC34Q8IZ02 419 aa12.69□□□□□ -0.38
CHEK1-203ENST00000428830 RLN3Q8WXF3 142 aa12.69□□□□□ -0.38
CHEK1-203ENST00000428830 LINC00615Q96LM1 132 aaPredicted RBP12.69□□□□□ -0.38
CHEK1-203ENST00000428830 APOOQ9BUR5 198 aa12.69□□□□□ -0.38
CHEK1-203ENST00000428830 GPR174Q9BXC1 333 aa12.69□□□□□ -0.38
CHEK1-203ENST00000428830 FAM126AQ9BYI3 521 aaPredicted RBP12.69□□□□□ -0.38
CHEK1-203ENST00000428830 TSR3Q9UJK0 312 aaKnown RBP12.69□□□□□ -0.38
CHEK1-203ENST00000428830 IKZF3Q9UKT9 509 aa12.69□□□□□ -0.38
CHEK1-203ENST00000428830 ZDBF2Q9HCK1 2354 aa12.69□□□□□ -0.38
CHEK1-203ENST00000428830 PLXND1Q9Y4D7 1925 aa12.69□□□□□ -0.38
CHEK1-203ENST00000428830 POM121BA6NF01 834 aa12.69□□□□□ -0.38
CHEK1-203ENST00000428830 NEMP2A6NFY4 417 aa12.69□□□□□ -0.38
CHEK1-203ENST00000428830 CACNB4O00305 520 aaPredicted RBP12.69□□□□□ -0.38
CHEK1-203ENST00000428830 SMIM24O75264 130 aa12.69□□□□□ -0.38
CHEK1-203ENST00000428830 H2AFYO75367 372 aaKnown RBP12.69□□□□□ -0.38
CHEK1-203ENST00000428830 GPC4O75487 556 aa12.69□□□□□ -0.38
CHEK1-203ENST00000428830 IPO13O94829 963 aaKnown RBP12.69□□□□□ -0.38
CHEK1-203ENST00000428830 SLCO2B1O94956 709 aa12.69□□□□□ -0.38
CHEK1-203ENST00000428830 FSBPO95073 299 aa12.69□□□□□ -0.38
CHEK1-203ENST00000428830 SERPINE1P05121 402 aa12.69□□□□□ -0.38
CHEK1-203ENST00000428830 IGHV4-34P06331 123 aa12.69□□□□□ -0.38
CHEK1-203ENST00000428830 TPBGLP0DKB5 382 aa12.69□□□□□ -0.38
CHEK1-203ENST00000428830 AKT2P31751 481 aa12.69□□□□□ -0.38
CHEK1-203ENST00000428830 CCR3P51677 355 aa12.69□□□□□ -0.38
CHEK1-203ENST00000428830 BST1Q10588 318 aa12.69□□□□□ -0.38
CHEK1-203ENST00000428830 ASPHQ12797 758 aa12.69□□□□□ -0.38
CHEK1-203ENST00000428830 CRTC3Q6UUV7 619 aa12.69□□□□□ -0.38
CHEK1-203ENST00000428830 MAMSTRQ6ZN01 415 aa12.69□□□□□ -0.38
CHEK1-203ENST00000428830 FAM47EQ6ZV65 393 aa12.69□□□□□ -0.38
CHEK1-203ENST00000428830 CPLX4Q7Z7G2 160 aa12.69□□□□□ -0.38
CHEK1-203ENST00000428830 SLC22A9Q8IVM8 553 aa12.69□□□□□ -0.38
CHEK1-203ENST00000428830 FAM160A2Q8N612 972 aaPredicted RBP12.69□□□□□ -0.38
CHEK1-203ENST00000428830 EDAQ92838 391 aa12.69□□□□□ -0.38
CHEK1-203ENST00000428830 EXT2Q93063 718 aa12.69□□□□□ -0.38
CHEK1-203ENST00000428830 TMEM159Q96B96 161 aa12.69□□□□□ -0.38
CHEK1-203ENST00000428830 BIRC7Q96CA5 298 aa12.69□□□□□ -0.38
CHEK1-203ENST00000428830 PITPNM3Q9BZ71 974 aa12.69□□□□□ -0.38
CHEK1-203ENST00000428830 FAM107BQ9H098 131 aa12.69□□□□□ -0.38
CHEK1-203ENST00000428830 SLCO1B3Q9NPD5 702 aa12.69□□□□□ -0.38
CHEK1-203ENST00000428830 FGFR1OP2Q9NVK5 253 aa12.69□□□□□ -0.38
CHEK1-203ENST00000428830 GULP1Q9UBP9 304 aa12.69□□□□□ -0.38
CHEK1-203ENST00000428830 FAM8A1Q9UBU6 413 aa12.69□□□□□ -0.38
CHEK1-203ENST00000428830 CDYLQ9Y232 598 aa12.69□□□□□ -0.38
CHEK1-203ENST00000428830 TTC28Q96AY4 2481 aa12.69□□□□□ -0.38
CHEK1-203ENST00000428830 C17orf113A0A1B0GUU1 675 aa12.68□□□□□ -0.38
CHEK1-203ENST00000428830 A8MT66 165 aa12.68□□□□□ -0.38
CHEK1-203ENST00000428830 FAM107AO95990 144 aa12.68□□□□□ -0.38
CHEK1-203ENST00000428830 PDGFBP01127 241 aaPredicted RBP12.68□□□□□ -0.38
CHEK1-203ENST00000428830 HOXC4P09017 264 aaPredicted RBP12.68□□□□□ -0.38
CHEK1-203ENST00000428830 MTHFD2P13995 350 aa12.68□□□□□ -0.38
CHEK1-203ENST00000428830 PBLDP30039 288 aaPredicted RBP12.68□□□□□ -0.38
CHEK1-203ENST00000428830 NUDT1P36639 197 aa12.68□□□□□ -0.38
CHEK1-203ENST00000428830 CLDN2P57739 230 aa12.68□□□□□ -0.38
CHEK1-203ENST00000428830 NFKB2Q00653 900 aa12.68□□□□□ -0.38
CHEK1-203ENST00000428830 STX3Q13277 289 aa12.68□□□□□ -0.38
CHEK1-203ENST00000428830 CWF19L1Q69YN2 538 aaKnown RBP12.68□□□□□ -0.38
CHEK1-203ENST00000428830 SBSNQ6UWP8 590 aa12.68□□□□□ -0.38
CHEK1-203ENST00000428830 CYHR1Q6ZMK1 362 aa12.68□□□□□ -0.38
CHEK1-203ENST00000428830 NEK10Q6ZWH5 1172 aa12.68□□□□□ -0.38
CHEK1-203ENST00000428830 FRA10AC1Q70Z53 315 aa12.68□□□□□ -0.38
CHEK1-203ENST00000428830 C11orf96Q7Z7L8 435 aa12.68□□□□□ -0.38
CHEK1-203ENST00000428830 LRRTM4Q86VH4 590 aa12.68□□□□□ -0.38
CHEK1-203ENST00000428830 GPSM1Q86YR5 675 aa12.68□□□□□ -0.38
CHEK1-203ENST00000428830 VRK3Q8IV63 474 aa12.68□□□□□ -0.38
CHEK1-203ENST00000428830 FRMD1Q8N878 549 aa12.68□□□□□ -0.38
CHEK1-203ENST00000428830 TMEM145Q8NBT3 493 aa12.68□□□□□ -0.38
CHEK1-203ENST00000428830 OR6Y1Q8NGX8 325 aa12.68□□□□□ -0.38
CHEK1-203ENST00000428830 BCAS4Q8TDM0 211 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms