RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 HNRNPLP14866 589 aaKnown RBP eCLIP5.08□□□□□ -1.61e-8■■■■□ 26.6
RIF1-203ENST00000428287 GOT1P17174 413 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 PPP3CCP48454 512 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 HERVK_113P63132 956 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 GBX1Q14549 363 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 POU6F1Q14863 301 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 CA9Q16790 459 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 PITRM1Q5JRX3 1037 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 SPANXN2Q5MJ10 180 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 MAP1SQ66K74 1059 aaPredicted RBP5.08□□□□□ -1.6
RIF1-203ENST00000428287 CUZD1Q86UP6 607 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 SNX29P2Q8IUI4 249 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 PGBD3Q8N328 593 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 SVOPLQ8N434 492 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 HEXDCQ8WVB3 486 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 ATOH8Q96SQ7 321 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 MARVELD1Q9BSK0 173 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 ERVK-6Q9BXR3 956 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 MCOLN1Q9GZU1 580 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 EML4Q9HC35 981 aaKnown RBP5.08□□□□□ -1.6
RIF1-203ENST00000428287 PXMP2Q9NR77 195 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 HEBP1Q9NRV9 189 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 HMGXB4Q9UGU5 601 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 CLRN2A0PK11 232 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 OR2A25A4D2G3 310 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 ANGPT2O15123 496 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 CELF2O95319 508 aaKnown RBP5.08□□□□□ -1.6
RIF1-203ENST00000428287 MED26O95402 600 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 C1RP00736 705 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 APOA1P02647 267 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 FAM157BP0CG42 384 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 CHMP24386 653 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 HRH2P25021 359 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 ETFBP38117 255 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 AIF1P55008 147 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 OLR1P78380 273 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 LIPEQ05469 1076 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 MXD4Q14582 209 aaPredicted RBP5.08□□□□□ -1.6
RIF1-203ENST00000428287 CYP4Z1Q86W10 505 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 TAB3Q8N5C8 712 aaPredicted RBP5.08□□□□□ -1.6
RIF1-203ENST00000428287 OR8J3Q8NGG0 315 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 CAPSLQ8WWF8 208 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 MAGIXQ9H6Y5 334 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 DNAJB9Q9UBS3 223 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 ZNF225Q9UK10 706 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 BTBD3Q9Y2F9 522 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 TPRKBQ9Y3C4 175 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 PCDHB14Q9Y5E9 798 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 A0A0G2JMP0 313 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 SLC4A1P02730 911 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 FSHRP23945 695 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 NKX2-5P52952 324 aaPredicted RBP5.08□□□□□ -1.6
RIF1-203ENST00000428287 EIF2B5Q13144 721 aaKnown RBP5.08□□□□□ -1.6
RIF1-203ENST00000428287 SLAMF1Q13291 335 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 SLC10A6Q3KNW5 377 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 TBC1D10BQ4KMP7 808 aaPredicted RBP5.08□□□□□ -1.6
RIF1-203ENST00000428287 TOR1AIP1Q5JTV8 583 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 PKN3Q6P5Z2 889 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 FAM183BPQ6ZVS7 135 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 NRARPQ7Z6K4 114 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 DPP9Q86TI2 863 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 NOXA1Q86UR1 476 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 PLCZ1Q86YW0 608 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 LURAP1LQ8IV03 231 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 GALNT12Q8IXK2 581 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 CRYBG2Q8N1P7 616 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 GPR101Q96P66 508 aaPredicted RBP5.08□□□□□ -1.6
RIF1-203ENST00000428287 ZNF229Q9UJW7 825 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 ADAMTS5Q9UNA0 930 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 SNX7Q9UNH6 387 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 GJA3Q9Y6H8 435 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 ZBTB42B2RXF5 422 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 PSMD11O00231 422 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 USP2O75604 605 aaPredicted RBP5.08□□□□□ -1.6
RIF1-203ENST00000428287 KRT8P05787 483 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 NCF1P14598 390 aaPredicted RBP5.08□□□□□ -1.6
RIF1-203ENST00000428287 CES1P23141 567 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 SNX16P57768 344 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 CDH17Q12864 832 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 KIAA0040Q15053 153 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 RABL3Q5HYI8 236 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 LYPD8Q6UX82 237 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 RNF165Q6ZSG1 346 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 ATCAYQ86WG3 371 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 TMBIM1Q969X1 311 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 ZNF419Q96HQ0 510 aaPredicted RBP5.08□□□□□ -1.6
RIF1-203ENST00000428287 DPEP3Q9H4B8 488 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 CAB39LQ9H9S4 337 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 FAM49BQ9NUQ9 324 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 DCAF13Q9NV06 445 aaKnown RBP5.08□□□□□ -1.6
RIF1-203ENST00000428287 IL37Q9NZH6 218 aa5.08□□□□□ -1.6
RIF1-203ENST00000428287 MYO15AQ9UKN7 3530 aa5.07□□□□□ -1.6
RIF1-203ENST00000428287 NAV3Q8IVL0 2385 aa5.07□□□□□ -1.6
RIF1-203ENST00000428287 A6NL46 340 aa5.07□□□□□ -1.6
RIF1-203ENST00000428287 ENPP3O14638 875 aa5.07□□□□□ -1.6
RIF1-203ENST00000428287 ERCC2P18074 760 aa5.07□□□□□ -1.6
RIF1-203ENST00000428287 TGFBR2P37173 567 aa5.07□□□□□ -1.6
RIF1-203ENST00000428287 PIK3CBP42338 1070 aa5.07□□□□□ -1.6
RIF1-203ENST00000428287 CCR10P46092 362 aa5.07□□□□□ -1.6
RIF1-203ENST00000428287 DEFA1P59665 94 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms