RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 SLC44A1Q8WWI5 657 aa9.61□□□□□ -0.87
SNX13-203ENST00000428135 TRNT1Q96Q11 434 aaKnown RBP9.61□□□□□ -0.87
SNX13-203ENST00000428135 SLC38A2Q96QD8 506 aa9.61□□□□□ -0.87
SNX13-203ENST00000428135 PAAF1Q9BRP4 392 aa9.61□□□□□ -0.87
SNX13-203ENST00000428135 OXCT2Q9BYC2 517 aaPredicted RBP9.61□□□□□ -0.87
SNX13-203ENST00000428135 R3HDMLQ9H3Y0 253 aa9.61□□□□□ -0.87
SNX13-203ENST00000428135 GRXCR1A8MXD5 290 aa9.61□□□□□ -0.87
SNX13-203ENST00000428135 KPNA4O00629 521 aaPredicted RBP9.61□□□□□ -0.87
SNX13-203ENST00000428135 DHX15O43143 795 aaKnown RBP9.61□□□□□ -0.87
SNX13-203ENST00000428135 FUT4P22083 530 aa9.61□□□□□ -0.87
SNX13-203ENST00000428135 CLCNKAP51800 687 aa9.61□□□□□ -0.87
SNX13-203ENST00000428135 HDDC2Q7Z4H3 204 aa9.61□□□□□ -0.87
SNX13-203ENST00000428135 HIC2Q96JB3 615 aa9.61□□□□□ -0.87
SNX13-203ENST00000428135 SEMA3GQ9NS98 782 aa9.61□□□□□ -0.87
SNX13-203ENST00000428135 MIOSQ9NXC5 875 aa9.61□□□□□ -0.87
SNX13-203ENST00000428135 STMN3Q9NZ72 180 aa9.61□□□□□ -0.87
SNX13-203ENST00000428135 H3BQ06 376 aaPredicted RBP9.61□□□□□ -0.87
SNX13-203ENST00000428135 PSMD9O00233 223 aa9.61□□□□□ -0.87
SNX13-203ENST00000428135 CLDN4O14493 209 aa9.61□□□□□ -0.87
SNX13-203ENST00000428135 SHOX2O60902 331 aaPredicted RBP9.61□□□□□ -0.87
SNX13-203ENST00000428135 OR5F1O95221 314 aa9.61□□□□□ -0.87
SNX13-203ENST00000428135 NCK1P16333 377 aa9.61□□□□□ -0.87
SNX13-203ENST00000428135 ITGAXP20702 1163 aa9.61□□□□□ -0.87
SNX13-203ENST00000428135 NUP62P37198 522 aaPredicted RBP9.61□□□□□ -0.87
SNX13-203ENST00000428135 POLR2JP52435 117 aaKnown RBP9.61□□□□□ -0.87
SNX13-203ENST00000428135 CHRNA6Q15825 494 aa9.61□□□□□ -0.87
SNX13-203ENST00000428135 ADGRF1Q5T601 910 aa9.61□□□□□ -0.87
SNX13-203ENST00000428135 ZDHHC20Q5W0Z9 365 aa9.61□□□□□ -0.87
SNX13-203ENST00000428135 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.61□□□□□ -0.87
SNX13-203ENST00000428135 GSTCDQ8NEC7 633 aa9.61□□□□□ -0.87
SNX13-203ENST00000428135 ACMSDQ8TDX5 336 aa9.61□□□□□ -0.87
SNX13-203ENST00000428135 KCNS3Q9BQ31 491 aa9.61□□□□□ -0.87
SNX13-203ENST00000428135 ZNF358Q9NW07 568 aa9.61□□□□□ -0.87
SNX13-203ENST00000428135 HS3ST4Q9Y661 456 aa9.61□□□□□ -0.87
SNX13-203ENST00000428135 LTBP4Q8N2S1 1624 aa9.61□□□□□ -0.87
SNX13-203ENST00000428135 NEMP2A6NFY4 417 aa9.61□□□□□ -0.87
SNX13-203ENST00000428135 WNT9AO14904 365 aa9.61□□□□□ -0.87
SNX13-203ENST00000428135 IDH3BO43837 385 aa9.61□□□□□ -0.87
SNX13-203ENST00000428135 RFPL2O75678 378 aa9.61□□□□□ -0.87
SNX13-203ENST00000428135 ABHD2P08910 425 aa9.61□□□□□ -0.87
SNX13-203ENST00000428135 DBTP11182 482 aaKnown RBP9.61□□□□□ -0.87
SNX13-203ENST00000428135 TPSB2P20231 275 aa9.61□□□□□ -0.87
SNX13-203ENST00000428135 PBX1P40424 430 aa9.61□□□□□ -0.87
SNX13-203ENST00000428135 AP1S1P61966 158 aa9.61□□□□□ -0.87
SNX13-203ENST00000428135 TRAF3Q13114 568 aa9.61□□□□□ -0.87
SNX13-203ENST00000428135 MED22Q15528 200 aa9.61□□□□□ -0.87
SNX13-203ENST00000428135 TPSAB1Q15661 275 aa9.61□□□□□ -0.87
SNX13-203ENST00000428135 LPAL2Q16609 132 aa9.61□□□□□ -0.87
SNX13-203ENST00000428135 WASHC2DQ5SRD0 308 aa9.61□□□□□ -0.87
SNX13-203ENST00000428135 LY6G5CQ5SRR4 150 aa9.61□□□□□ -0.87
SNX13-203ENST00000428135 KLHL17Q6TDP4 642 aa9.61□□□□□ -0.87
SNX13-203ENST00000428135 CRYBG2Q8N1P7 616 aa9.61□□□□□ -0.87
SNX13-203ENST00000428135 BPIFB1Q8TDL5 484 aa9.61□□□□□ -0.87
SNX13-203ENST00000428135 SH3GL2Q99962 352 aa9.61□□□□□ -0.87
SNX13-203ENST00000428135 DAPK2Q9UIK4 370 aa9.61□□□□□ -0.87
SNX13-203ENST00000428135 PLCH1Q4KWH8 1693 aa9.61□□□□□ -0.87
SNX13-203ENST00000428135 UGT2B17O75795 530 aa9.61□□□□□ -0.87
SNX13-203ENST00000428135 AHCYP23526 432 aa9.61□□□□□ -0.87
SNX13-203ENST00000428135 IL12BP29460 328 aa9.61□□□□□ -0.87
SNX13-203ENST00000428135 CDH5P33151 784 aaPredicted RBP9.61□□□□□ -0.87
SNX13-203ENST00000428135 BDKRB1P46663 353 aa9.61□□□□□ -0.87
SNX13-203ENST00000428135 SLC35G1Q2M3R5 365 aa9.61□□□□□ -0.87
SNX13-203ENST00000428135 ZNF648Q5T619 568 aaPredicted RBP9.61□□□□□ -0.87
SNX13-203ENST00000428135 SLC39A4Q6P5W5 647 aa9.61□□□□□ -0.87
SNX13-203ENST00000428135 SMARCD3Q6STE5 483 aa9.61□□□□□ -0.87
SNX13-203ENST00000428135 FBXW8Q8N3Y1 598 aa9.61□□□□□ -0.87
SNX13-203ENST00000428135 TTC29Q8NA56 475 aaPredicted RBP9.61□□□□□ -0.87
SNX13-203ENST00000428135 ARL8BQ9NVJ2 186 aa9.61□□□□□ -0.87
SNX13-203ENST00000428135 IKZF2Q9UKS7 526 aa9.61□□□□□ -0.87
SNX13-203ENST00000428135 PLLPQ9Y342 182 aa9.61□□□□□ -0.87
SNX13-203ENST00000428135 CHD4Q14839 1912 aa9.61□□□□□ -0.87
SNX13-203ENST00000428135 TNFRSF10BO14763 440 aa9.6□□□□□ -0.87
SNX13-203ENST00000428135 CA3P07451 260 aa9.6□□□□□ -0.87
SNX13-203ENST00000428135 RPL3P39023 403 aaKnown RBP9.6□□□□□ -0.87
SNX13-203ENST00000428135 TPGS2Q68CL5 300 aa9.6□□□□□ -0.87
SNX13-203ENST00000428135 PAOXQ6QHF9 649 aa9.6□□□□□ -0.87
SNX13-203ENST00000428135 PTCHD4Q6ZW05 846 aa9.6□□□□□ -0.87
SNX13-203ENST00000428135 PIM3Q86V86 326 aa9.6□□□□□ -0.87
SNX13-203ENST00000428135 NCSTNQ92542 709 aa9.6□□□□□ -0.87
SNX13-203ENST00000428135 EPS8L2Q9H6S3 715 aa9.6□□□□□ -0.87
SNX13-203ENST00000428135 EXD2Q9NVH0 621 aa9.6□□□□□ -0.87
SNX13-203ENST00000428135 SLC2A6Q9UGQ3 507 aa9.6□□□□□ -0.87
SNX13-203ENST00000428135 RAPGEFL1Q9UHV5 662 aa9.6□□□□□ -0.87
SNX13-203ENST00000428135 INSL5Q9Y5Q6 135 aa9.6□□□□□ -0.87
SNX13-203ENST00000428135 TRIM38O00635 465 aa9.6□□□□□ -0.87
SNX13-203ENST00000428135 DCLK1O15075 740 aa9.6□□□□□ -0.87
SNX13-203ENST00000428135 CNTN5O94779 1100 aa9.6□□□□□ -0.87
SNX13-203ENST00000428135 PGM3O95394 542 aa9.6□□□□□ -0.87
SNX13-203ENST00000428135 PTNP21246 168 aa9.6□□□□□ -0.87
SNX13-203ENST00000428135 KIR3DL1P43629 444 aa9.6□□□□□ -0.87
SNX13-203ENST00000428135 RXRGP48443 463 aa9.6□□□□□ -0.87
SNX13-203ENST00000428135 SUZ12Q15022 739 aaKnown RBP9.6□□□□□ -0.87
SNX13-203ENST00000428135 ATP13A5Q4VNC0 1218 aa9.6□□□□□ -0.87
SNX13-203ENST00000428135 XKR4Q5GH76 650 aa9.6□□□□□ -0.87
SNX13-203ENST00000428135 PIK3R6Q5UE93 754 aa9.6□□□□□ -0.87
SNX13-203ENST00000428135 FUKQ8N0W3 1084 aa9.6□□□□□ -0.87
SNX13-203ENST00000428135 ZNF781Q8N8C0 355 aa9.6□□□□□ -0.87
SNX13-203ENST00000428135 OR4E2Q8NGC2 313 aa9.6□□□□□ -0.87
SNX13-203ENST00000428135 BRSK1Q8TDC3 778 aa9.6□□□□□ -0.87
SNX13-203ENST00000428135 GAL3ST1Q99999 423 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms