RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 PHTF1Q9UMS5 762 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 NPIPA1Q9UND3 350 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 RAD51CO43502 376 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 ZNF432O94892 652 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 TACR2P21452 398 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 RPS9P46781 194 aaKnown RBP5.67□□□□□ -1.5
HERC4-206ENST00000427635 KHKP50053 298 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 RAB28P51157 221 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 AQP5P55064 265 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 C2orf80Q0P641 193 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 TREML2Q5T2D2 321 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 OTUD3Q5T2D3 398 aaPredicted RBP5.67□□□□□ -1.5
HERC4-206ENST00000427635 RAB11FIP2Q7L804 512 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 SCUBE1Q8IWY4 988 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 MCOLN2Q8IZK6 566 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 ARL14EPQ8N8R7 260 aaPredicted RBP5.67□□□□□ -1.5
HERC4-206ENST00000427635 PSMA8Q8TAA3 256 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 ARL5BQ96KC2 179 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 PANX1Q96RD7 426 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 STRA6Q9BX79 667 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 ERGIC3Q9Y282 383 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 ITSN1Q15811 1721 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 ELOA3DA6NLF2 546 aaPredicted RBP5.67□□□□□ -1.5
HERC4-206ENST00000427635 ABCB7O75027 752 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 HRGP04196 525 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 LINGO3P0C6S8 592 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 CBSLP0DN79 551 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 PGAM2P15259 253 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 ATP4AP20648 1035 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 ENPP1P22413 925 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 CCNOP22674 350 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 CBSP35520 551 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 MAPK12P53778 367 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 SLC12A3P55017 1021 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 ELOA3BQ3SY89 546 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 OXLD1Q5BKU9 147 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 C9orf57Q5W0N0 161 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 KCNT2Q6UVM3 1135 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 DHRSXQ8N5I4 330 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 CAMKVQ8NCB2 501 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 ELOA3Q8NG57 546 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 HDAC7Q8WUI4 952 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 MAP3K3Q99759 626 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 CHCHD6Q9BRQ6 235 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 TMEM79Q9BSE2 394 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 ISCUQ9H1K1 167 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 FAM83DQ9H4H8 585 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 GPN1Q9HCN4 374 aaPredicted RBP5.67□□□□□ -1.5
HERC4-206ENST00000427635 PCDHB16Q9NRJ7 776 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 HEY2Q9UBP5 337 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 MORF4L1Q9UBU8 362 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 RAPGEFL1Q9UHV5 662 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 CPQQ9Y646 472 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 ASTN2O75129 1339 aaPredicted RBP5.67□□□□□ -1.5
HERC4-206ENST00000427635 SPHKAPQ2M3C7 1700 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 BMP4P12644 408 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 ADRA1DP25100 572 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 PSMB4P28070 264 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 SHMT1P34896 483 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 TRIM23P36406 574 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 GABREP78334 506 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 FCHO2Q0JRZ9 810 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 SP140Q13342 867 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 MAPKAPK3Q16644 382 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 CRY2Q49AN0 593 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 KIAA0895LQ68EN5 471 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 TMEM220Q6QAJ8 160 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 C7orf57Q8NEG2 295 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 LILRB1Q8NHL6 650 aaPredicted RBP5.67□□□□□ -1.5
HERC4-206ENST00000427635 TRMT10AQ8TBZ6 339 aaKnown RBP5.67□□□□□ -1.5
HERC4-206ENST00000427635 EPS8L1Q8TE68 723 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 TM9SF4Q92544 642 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 EPYCQ99645 322 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 SFXN1Q9H9B4 322 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 NEXMIFQ5QGS0 1516 aa5.67□□□□□ -1.5
HERC4-206ENST00000427635 L7N2F9 121 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 KCNK1O00180 336 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 TULP2O00295 520 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 CLDN5O00501 218 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 RFXANKO14593 260 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 ADAMTS3O15072 1205 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 FOXN1O15353 648 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 DLX3O60479 287 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 MAGEA9P43362 315 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 ACLYP53396 1101 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 VAMP2P63027 116 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 CDK18Q07002 472 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 PYDC2Q56P42 97 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 CES3Q6UWW8 571 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 SLC36A4Q6YBV0 504 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 SV2AQ7L0J3 742 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 AMZ2Q86W34 360 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 RAB43Q86YS6 212 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 ZNF100Q8IYN0 542 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 PTGR2Q8N8N7 351 aaPredicted RBP5.66□□□□□ -1.5
HERC4-206ENST00000427635 TC2NQ8N9U0 490 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 VANGL1Q8TAA9 524 aaPredicted RBP5.66□□□□□ -1.5
HERC4-206ENST00000427635 EXOSC8Q96B26 276 aaKnown RBP5.66□□□□□ -1.5
HERC4-206ENST00000427635 MFSD14AQ96MC6 490 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 KLHL32Q96NJ5 620 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms