RNA–Protein interactions for RNA: ENST00000427391.2

FIRRE-201, Transcript of firre intergenic repeating RNA element, humanhuman

TSL 2 BASIC

Gene FIRRE, Length 2,926 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FIRRE-201ENST00000427391 HOXA2O43364 376 aa11.45□□□□□ -0.58
FIRRE-201ENST00000427391 PGLSO95336 258 aa11.45□□□□□ -0.58
FIRRE-201ENST00000427391 HSD17B1P14061 328 aa11.45□□□□□ -0.58
FIRRE-201ENST00000427391 PSMA3P25788 255 aa11.45□□□□□ -0.58
FIRRE-201ENST00000427391 HNF1BP35680 557 aa11.45□□□□□ -0.58
FIRRE-201ENST00000427391 HMGCLP35914 325 aa11.45□□□□□ -0.58
FIRRE-201ENST00000427391 ERVK-8P63133 956 aa11.45□□□□□ -0.58
FIRRE-201ENST00000427391 HMGCS1Q01581 520 aa11.45□□□□□ -0.58
FIRRE-201ENST00000427391 PTGR1Q14914 329 aa11.45□□□□□ -0.58
FIRRE-201ENST00000427391 CHRNA6Q15825 494 aa11.45□□□□□ -0.58
FIRRE-201ENST00000427391 ATP6AP1LQ52LC2 224 aa11.45□□□□□ -0.58
FIRRE-201ENST00000427391 CARM1Q86X55 608 aa11.45□□□□□ -0.58
FIRRE-201ENST00000427391 ZNF296Q8WUU4 475 aaPredicted RBP11.45□□□□□ -0.58
FIRRE-201ENST00000427391 C1QTNF3Q9BXJ4 246 aa11.45□□□□□ -0.58
FIRRE-201ENST00000427391 RPF2Q9H7B2 306 aaKnown RBP11.45□□□□□ -0.58
FIRRE-201ENST00000427391 IPPKQ9H8X2 491 aa11.45□□□□□ -0.58
FIRRE-201ENST00000427391 OLAHQ9NV23 265 aa11.45□□□□□ -0.58
FIRRE-201ENST00000427391 DDX18Q9NVP1 670 aaKnown RBP11.45□□□□□ -0.58
FIRRE-201ENST00000427391 MBD1Q9UIS9 605 aaPredicted RBP11.45□□□□□ -0.58
FIRRE-201ENST00000427391 NUP214P35658 2090 aaPredicted RBP11.45□□□□□ -0.58
FIRRE-201ENST00000427391 FFAR2O15552 330 aa11.45□□□□□ -0.58
FIRRE-201ENST00000427391 CD70P32970 193 aa11.45□□□□□ -0.58
FIRRE-201ENST00000427391 HSPA13P48723 471 aa11.45□□□□□ -0.58
FIRRE-201ENST00000427391 CLCN4P51793 760 aa11.45□□□□□ -0.58
FIRRE-201ENST00000427391 APOFQ13790 326 aa11.45□□□□□ -0.58
FIRRE-201ENST00000427391 GTF2H2Q13888 395 aa11.45□□□□□ -0.58
FIRRE-201ENST00000427391 C11orf91Q3C1V1 193 aa11.45□□□□□ -0.58
FIRRE-201ENST00000427391 NHSL2Q5HYW2 709 aa11.45□□□□□ -0.58
FIRRE-201ENST00000427391 KRT80Q6KB66 452 aa11.45□□□□□ -0.58
FIRRE-201ENST00000427391 GTF2H2CQ6P1K8 395 aa11.45□□□□□ -0.58
FIRRE-201ENST00000427391 SPATA19Q7Z5L4 167 aa11.45□□□□□ -0.58
FIRRE-201ENST00000427391 BBS7Q8IWZ6 715 aa11.45□□□□□ -0.58
FIRRE-201ENST00000427391 RNF168Q8IYW5 571 aaPredicted RBP11.45□□□□□ -0.58
FIRRE-201ENST00000427391 HS6ST3Q8IZP7 471 aa11.45□□□□□ -0.58
FIRRE-201ENST00000427391 TMEM199Q8N511 208 aa11.45□□□□□ -0.58
FIRRE-201ENST00000427391 DNAJC5GQ8N7S2 189 aa11.45□□□□□ -0.58
FIRRE-201ENST00000427391 CLHC1Q8NHS4 586 aa11.45□□□□□ -0.58
FIRRE-201ENST00000427391 NCSTNQ92542 709 aa11.45□□□□□ -0.58
FIRRE-201ENST00000427391 MTFMTQ96DP5 389 aaKnown RBP11.45□□□□□ -0.58
FIRRE-201ENST00000427391 DUS3LQ96G46 650 aaKnown RBP11.45□□□□□ -0.58
FIRRE-201ENST00000427391 MPP4Q96JB8 637 aa11.45□□□□□ -0.58
FIRRE-201ENST00000427391 ZNF382Q96SR6 550 aa11.45□□□□□ -0.58
FIRRE-201ENST00000427391 EGFL8Q99944 293 aa11.45□□□□□ -0.58
FIRRE-201ENST00000427391 ZFYVE1Q9HBF4 777 aa11.45□□□□□ -0.58
FIRRE-201ENST00000427391 ACTR3BQ9P1U1 418 aa11.45□□□□□ -0.58
FIRRE-201ENST00000427391 H7C0S8 307 aa11.44□□□□□ -0.58
FIRRE-201ENST00000427391 PITPNM1O00562 1244 aa11.44□□□□□ -0.58
FIRRE-201ENST00000427391 BPIP17213 487 aa11.44□□□□□ -0.58
FIRRE-201ENST00000427391 HRH2P25021 359 aa11.44□□□□□ -0.58
FIRRE-201ENST00000427391 PSMA4P25789 261 aaKnown RBP11.44□□□□□ -0.58
FIRRE-201ENST00000427391 PCSK6P29122 969 aa11.44□□□□□ -0.58
FIRRE-201ENST00000427391 VEPH1Q14D04 833 aa11.44□□□□□ -0.58
FIRRE-201ENST00000427391 LCN8Q6JVE9 175 aa11.44□□□□□ -0.58
FIRRE-201ENST00000427391 TXNDC11Q6PKC3 985 aa11.44□□□□□ -0.58
FIRRE-201ENST00000427391 OFCC1Q8IZS5 231 aa11.44□□□□□ -0.58
FIRRE-201ENST00000427391 OVCA2Q8WZ82 227 aa11.44□□□□□ -0.58
FIRRE-201ENST00000427391 FBXL20Q96IG2 436 aa11.44□□□□□ -0.58
FIRRE-201ENST00000427391 OSBPL11Q9BXB4 747 aa11.44□□□□□ -0.58
FIRRE-201ENST00000427391 NUSAP1Q9BXS6 441 aaKnown RBP11.44□□□□□ -0.58
FIRRE-201ENST00000427391 MRPS26Q9BYN8 205 aaKnown RBP11.44□□□□□ -0.58
FIRRE-201ENST00000427391 BRINP2Q9C0B6 783 aa11.44□□□□□ -0.58
FIRRE-201ENST00000427391 OCEL1Q9H607 264 aa11.44□□□□□ -0.58
FIRRE-201ENST00000427391 LIN28AQ9H9Z2 209 aaKnown RBP11.44□□□□□ -0.58
FIRRE-201ENST00000427391 ZFP14Q9HCL3 533 aa11.44□□□□□ -0.58
FIRRE-201ENST00000427391 AGPAT4Q9NRZ5 378 aa11.44□□□□□ -0.58
FIRRE-201ENST00000427391 ARMC1Q9NVT9 282 aa11.44□□□□□ -0.58
FIRRE-201ENST00000427391 ZNHIT2Q9UHR6 403 aa11.44□□□□□ -0.58
FIRRE-201ENST00000427391 CNOT11Q9UKZ1 510 aaKnown RBP11.44□□□□□ -0.58
FIRRE-201ENST00000427391 VPS9D1Q9Y2B5 631 aa11.44□□□□□ -0.58
FIRRE-201ENST00000427391 RNF103-CHMP3A0A140T963 221 aa11.44□□□□□ -0.58
FIRRE-201ENST00000427391 EEDO75530 441 aaKnown RBP11.44□□□□□ -0.58
FIRRE-201ENST00000427391 SOD2P04179 222 aa11.44□□□□□ -0.58
FIRRE-201ENST00000427391 PCNAP12004 261 aa11.44□□□□□ -0.58
FIRRE-201ENST00000427391 BMP2P12643 396 aa11.44□□□□□ -0.58
FIRRE-201ENST00000427391 RPL38P63173 70 aaKnown RBP11.44□□□□□ -0.58
FIRRE-201ENST00000427391 TXNL4AP83876 142 aaKnown RBP11.44□□□□□ -0.58
FIRRE-201ENST00000427391 TRAF3Q13114 568 aa11.44□□□□□ -0.58
FIRRE-201ENST00000427391 NFATC2Q13469 925 aa11.44□□□□□ -0.58
FIRRE-201ENST00000427391 AP5B1Q2VPB7 878 aa11.44□□□□□ -0.58
FIRRE-201ENST00000427391 AARS2Q5JTZ9 985 aaKnown RBP11.44□□□□□ -0.58
FIRRE-201ENST00000427391 DGKKQ5KSL6 1271 aa11.44□□□□□ -0.58
FIRRE-201ENST00000427391 PPP4R4Q6NUP7 873 aa11.44□□□□□ -0.58
FIRRE-201ENST00000427391 CYP20A1Q6UW02 462 aa11.44□□□□□ -0.58
FIRRE-201ENST00000427391 ANKFN1Q8N957 763 aa11.44□□□□□ -0.58
FIRRE-201ENST00000427391 HJURPQ8NCD3 748 aaPredicted RBP11.44□□□□□ -0.58
FIRRE-201ENST00000427391 TSPAN14Q8NG11 270 aa11.44□□□□□ -0.58
FIRRE-201ENST00000427391 RIN3Q8TB24 985 aa11.44□□□□□ -0.58
FIRRE-201ENST00000427391 ZUFSPQ96AP4 578 aa11.44□□□□□ -0.58
FIRRE-201ENST00000427391 VWCEQ96DN2 955 aa11.44□□□□□ -0.58
FIRRE-201ENST00000427391 TMEM169Q96HH4 297 aa11.44□□□□□ -0.58
FIRRE-201ENST00000427391 RBM38Q9H0Z9 239 aaKnown RBP11.44□□□□□ -0.58
FIRRE-201ENST00000427391 IL21Q9HBE4 155 aa11.44□□□□□ -0.58
FIRRE-201ENST00000427391 SUN2Q9UH99 717 aa11.44□□□□□ -0.58
FIRRE-201ENST00000427391 INTS6Q9UL03 887 aaKnown RBP11.44□□□□□ -0.58
FIRRE-201ENST00000427391 HEMK1Q9Y5R4 338 aaPredicted RBP11.44□□□□□ -0.58
FIRRE-201ENST00000427391 EI24O14681 340 aa11.43□□□□□ -0.58
FIRRE-201ENST00000427391 PFDN6O15212 129 aa11.43□□□□□ -0.58
FIRRE-201ENST00000427391 TPD52L2O43399 206 aaKnown RBP11.43□□□□□ -0.58
FIRRE-201ENST00000427391 CKMP06732 381 aa11.43□□□□□ -0.58
FIRRE-201ENST00000427391 GABRR2P28476 465 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms