RNA–Protein interactions for RNA: ENST00000424721.5

VPS8-205, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 653 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-205ENST00000424721 PLXDC1Q8IUK5 500 aa5.3□□□□□ -1.56
VPS8-205ENST00000424721 MAP7D3Q8IWC1 876 aa5.3□□□□□ -1.56
VPS8-205ENST00000424721 CACNA2D3Q8IZS8 1091 aa5.3□□□□□ -1.56
VPS8-205ENST00000424721 EXD3Q8N9H8 876 aa5.3□□□□□ -1.56
VPS8-205ENST00000424721 PLA2G15Q8NCC3 412 aa5.3□□□□□ -1.56
VPS8-205ENST00000424721 TMEM52Q8NDY8 209 aa5.3□□□□□ -1.56
VPS8-205ENST00000424721 NUP43Q8NFH3 380 aa5.3□□□□□ -1.56
VPS8-205ENST00000424721 EXD1Q8NHP7 514 aa5.3□□□□□ -1.56
VPS8-205ENST00000424721 ABHD4Q8TB40 342 aa5.3□□□□□ -1.56
VPS8-205ENST00000424721 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.3□□□□□ -1.56
VPS8-205ENST00000424721 CCHCR1Q8TD31 782 aa5.3□□□□□ -1.56
VPS8-205ENST00000424721 OR1E3Q8WZA6 343 aa5.3□□□□□ -1.56
VPS8-205ENST00000424721 KIRREL1Q96J84 757 aa5.3□□□□□ -1.56
VPS8-205ENST00000424721 CELF6Q96J87 481 aaKnown RBP5.3□□□□□ -1.56
VPS8-205ENST00000424721 COQ10AQ96MF6 247 aa5.3□□□□□ -1.56
VPS8-205ENST00000424721 GBP4Q96PP9 640 aa5.3□□□□□ -1.56
VPS8-205ENST00000424721 ERGIC2Q96RQ1 377 aa5.3□□□□□ -1.56
VPS8-205ENST00000424721 NUDCD1Q96RS6 583 aa5.3□□□□□ -1.56
VPS8-205ENST00000424721 JMJD8Q96S16 334 aa5.3□□□□□ -1.56
VPS8-205ENST00000424721 PCDHB18PQ96TA0 734 aa5.3□□□□□ -1.56
VPS8-205ENST00000424721 XPO4Q9C0E2 1151 aaKnown RBP5.3□□□□□ -1.56
VPS8-205ENST00000424721 KLC2Q9H0B6 622 aa5.3□□□□□ -1.56
VPS8-205ENST00000424721 RMI1Q9H9A7 625 aa5.3□□□□□ -1.56
VPS8-205ENST00000424721 FBXO8Q9NRD0 319 aa5.3□□□□□ -1.56
VPS8-205ENST00000424721 TAAR2Q9P1P5 351 aa5.3□□□□□ -1.56
VPS8-205ENST00000424721 IMPACTQ9P2X3 320 aa5.3□□□□□ -1.56
VPS8-205ENST00000424721 NDOR1Q9UHB4 597 aa5.3□□□□□ -1.56
VPS8-205ENST00000424721 LIMA1Q9UHB6 759 aaKnown RBP5.3□□□□□ -1.56
VPS8-205ENST00000424721 PCSK1NQ9UHG2 260 aa5.3□□□□□ -1.56
VPS8-205ENST00000424721 AMACRQ9UHK6 382 aa5.3□□□□□ -1.56
VPS8-205ENST00000424721 ZNHIT2Q9UHR6 403 aa5.3□□□□□ -1.56
VPS8-205ENST00000424721 LCMT1Q9UIC8 334 aa5.3□□□□□ -1.56
VPS8-205ENST00000424721 ANAPC2Q9UJX6 822 aa5.3□□□□□ -1.56
VPS8-205ENST00000424721 PPIL1Q9Y3C6 166 aa5.3□□□□□ -1.56
VPS8-205ENST00000424721 COMMD10Q9Y6G5 202 aa5.3□□□□□ -1.56
VPS8-205ENST00000424721 IGHV5-10-1A0A0J9YXX1 117 aa5.29□□□□□ -1.56
VPS8-205ENST00000424721 C7orf72A4D263 438 aa5.29□□□□□ -1.56
VPS8-205ENST00000424721 LGALS16A8MUM7 142 aa5.29□□□□□ -1.56
VPS8-205ENST00000424721 TRAFD1O14545 582 aaPredicted RBP5.29□□□□□ -1.56
VPS8-205ENST00000424721 POLR1CO15160 346 aaPredicted RBP5.29□□□□□ -1.56
VPS8-205ENST00000424721 HTRA2O43464 458 aaPredicted RBP5.29□□□□□ -1.56
VPS8-205ENST00000424721 DUX1O43812 170 aa5.29□□□□□ -1.56
VPS8-205ENST00000424721 HEXIM1O94992 359 aaKnown RBP5.29□□□□□ -1.56
VPS8-205ENST00000424721 MT-ND3P03897 115 aa5.29□□□□□ -1.56
VPS8-205ENST00000424721 HGFP14210 728 aa5.29□□□□□ -1.56
VPS8-205ENST00000424721 JUNBP17275 347 aaPredicted RBP5.29□□□□□ -1.56
VPS8-205ENST00000424721 ITIH1P19827 911 aa5.29□□□□□ -1.56
VPS8-205ENST00000424721 MIPP30301 263 aa5.29□□□□□ -1.56
VPS8-205ENST00000424721 TRHRP34981 398 aaPredicted RBP5.29□□□□□ -1.56
VPS8-205ENST00000424721 ADCY8P40145 1251 aa5.29□□□□□ -1.56
VPS8-205ENST00000424721 ACTR1BP42025 376 aa5.29□□□□□ -1.56
VPS8-205ENST00000424721 TNNT3P45378 269 aaPredicted RBP5.29□□□□□ -1.56
VPS8-205ENST00000424721 MMP13P45452 471 aa5.29□□□□□ -1.56
VPS8-205ENST00000424721 GPR85P60893 370 aa5.29□□□□□ -1.56
VPS8-205ENST00000424721 ACTR1AP61163 376 aa5.29□□□□□ -1.56
VPS8-205ENST00000424721 RPL26P61254 145 aaKnown RBP5.29□□□□□ -1.56
VPS8-205ENST00000424721 TPM4P67936 248 aa5.29□□□□□ -1.56
VPS8-205ENST00000424721 CDK3Q00526 305 aa5.29□□□□□ -1.56
VPS8-205ENST00000424721 MC2RQ01718 297 aa5.29□□□□□ -1.56
VPS8-205ENST00000424721 ABHD18Q0P651 414 aa5.29□□□□□ -1.56
VPS8-205ENST00000424721 NR1D2Q14995 579 aa5.29□□□□□ -1.56
VPS8-205ENST00000424721 TGIF1Q15583 401 aa5.29□□□□□ -1.56
VPS8-205ENST00000424721 ASIC2Q16515 512 aa5.29□□□□□ -1.56
VPS8-205ENST00000424721 PLEKHA7Q6IQ23 1121 aa5.29□□□□□ -1.56
VPS8-205ENST00000424721 DENND5AQ6IQ26 1287 aa5.29□□□□□ -1.56
VPS8-205ENST00000424721 SLC30A9Q6PML9 568 aa5.29□□□□□ -1.56
VPS8-205ENST00000424721 IRF2BP2Q7Z5L9 587 aa5.29□□□□□ -1.56
VPS8-205ENST00000424721 MTDHQ86UE4 582 aaKnown RBP5.29□□□□□ -1.56
VPS8-205ENST00000424721 HEATR4Q86WZ0 1026 aa5.29□□□□□ -1.56
VPS8-205ENST00000424721 C17orf82Q86X59 251 aaPredicted RBP5.29□□□□□ -1.56
VPS8-205ENST00000424721 GALNT13Q8IUC8 556 aa5.29□□□□□ -1.56
VPS8-205ENST00000424721 CCDC103Q8IW40 242 aa5.29□□□□□ -1.56
VPS8-205ENST00000424721 NLGN4XQ8N0W4 816 aa5.29□□□□□ -1.56
VPS8-205ENST00000424721 CBARPQ8N350 705 aaPredicted RBP5.29□□□□□ -1.56
VPS8-205ENST00000424721 AFAP1L2Q8N4X5 818 aa5.29□□□□□ -1.56
VPS8-205ENST00000424721 ATPAF2Q8N5M1 289 aa5.29□□□□□ -1.56
VPS8-205ENST00000424721 NLGN4YQ8NFZ3 816 aaPredicted RBP5.29□□□□□ -1.56
VPS8-205ENST00000424721 APOBEC4Q8WW27 367 aaKnown RBP5.29□□□□□ -1.56
VPS8-205ENST00000424721 SEC14L1Q92503 715 aa5.29□□□□□ -1.56
VPS8-205ENST00000424721 FAM168AQ92567 244 aa5.29□□□□□ -1.56
VPS8-205ENST00000424721 AP2M1Q96CW1 435 aa5.29□□□□□ -1.56
VPS8-205ENST00000424721 DTD2Q96FN9 168 aa5.29□□□□□ -1.56
VPS8-205ENST00000424721 PDXPQ96GD0 296 aa5.29□□□□□ -1.56
VPS8-205ENST00000424721 HERPUD2Q9BSE4 406 aa5.29□□□□□ -1.56
VPS8-205ENST00000424721 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.29□□□□□ -1.56
VPS8-205ENST00000424721 ADGRE3Q9BY15 652 aa5.29□□□□□ -1.56
VPS8-205ENST00000424721 MAGEB5Q9BZ81 275 aa5.29□□□□□ -1.56
VPS8-205ENST00000424721 SEMA4CQ9C0C4 833 aa5.29□□□□□ -1.56
VPS8-205ENST00000424721 GPN2Q9H9Y4 310 aaPredicted RBP5.29□□□□□ -1.56
VPS8-205ENST00000424721 PDFQ9HBH1 243 aa5.29□□□□□ -1.56
VPS8-205ENST00000424721 FGF22Q9HCT0 170 aa5.29□□□□□ -1.56
VPS8-205ENST00000424721 MRPL40Q9NQ50 206 aaKnown RBP5.29□□□□□ -1.56
VPS8-205ENST00000424721 SPATS2LQ9NUQ6 558 aaKnown RBP5.29□□□□□ -1.56
VPS8-205ENST00000424721 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.29□□□□□ -1.56
VPS8-205ENST00000424721 RCOR3Q9P2K3 495 aaPredicted RBP5.29□□□□□ -1.56
VPS8-205ENST00000424721 B4GALT6Q9UBX8 382 aa5.29□□□□□ -1.56
VPS8-205ENST00000424721 IP6K2Q9UHH9 426 aa5.29□□□□□ -1.56
VPS8-205ENST00000424721 TMEFF2Q9UIK5 374 aaPredicted RBP5.29□□□□□ -1.56
VPS8-205ENST00000424721 SUFUQ9UMX1 484 aa5.29□□□□□ -1.56
VPS8-205ENST00000424721 RPL26L1Q9UNX3 145 aaKnown RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms