RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 PPARGP37231 505 aaPredicted RBP13.21□□□□□ -0.3
PRPF39-202ENST00000424478 EIF2B5Q13144 721 aaKnown RBP13.21□□□□□ -0.3
PRPF39-202ENST00000424478 LGSNQ5TDP6 509 aa13.21□□□□□ -0.3
PRPF39-202ENST00000424478 TCEAL6Q6IPX3 200 aa13.21□□□□□ -0.3
PRPF39-202ENST00000424478 MACC1Q6ZN28 852 aa13.21□□□□□ -0.3
PRPF39-202ENST00000424478 TAOK1Q7L7X3 1001 aa13.21□□□□□ -0.3
PRPF39-202ENST00000424478 TCEAL3Q969E4 200 aa13.21□□□□□ -0.3
PRPF39-202ENST00000424478 TLCD1Q96CP7 247 aa13.21□□□□□ -0.3
PRPF39-202ENST00000424478 WDR92Q96MX6 357 aa13.21□□□□□ -0.3
PRPF39-202ENST00000424478 LRFN3Q9BTN0 628 aa13.21□□□□□ -0.3
PRPF39-202ENST00000424478 TMEM216Q9P0N5 145 aa13.21□□□□□ -0.3
PRPF39-202ENST00000424478 KLQ9UEF7 1012 aa13.21□□□□□ -0.3
PRPF39-202ENST00000424478 FBXO4Q9UKT5 387 aa13.21□□□□□ -0.3
PRPF39-202ENST00000424478 A0A1W2PR77 199 aa13.2□□□□□ -0.3
PRPF39-202ENST00000424478 CDC7O00311 574 aa13.2□□□□□ -0.3
PRPF39-202ENST00000424478 BCAT2O15382 392 aaPredicted RBP13.2□□□□□ -0.3
PRPF39-202ENST00000424478 ZNF37AP17032 561 aaPredicted RBP13.2□□□□□ -0.3
PRPF39-202ENST00000424478 KCNC1P48547 511 aa13.2□□□□□ -0.3
PRPF39-202ENST00000424478 PRLHRP49683 370 aa13.2□□□□□ -0.3
PRPF39-202ENST00000424478 POU4F1Q01851 419 aa13.2□□□□□ -0.3
PRPF39-202ENST00000424478 ZKSCAN8Q15776 578 aaPredicted RBP13.2□□□□□ -0.3
PRPF39-202ENST00000424478 TNFAIP8L3Q5GJ75 292 aa13.2□□□□□ -0.3
PRPF39-202ENST00000424478 LYPLAL1Q5VWZ2 237 aa13.2□□□□□ -0.3
PRPF39-202ENST00000424478 DUS1LQ6P1R4 473 aaKnown RBP13.2□□□□□ -0.3
PRPF39-202ENST00000424478 KYAT3Q6YP21 454 aaKnown RBP13.2□□□□□ -0.3
PRPF39-202ENST00000424478 NLRP8Q86W28 1048 aa13.2□□□□□ -0.3
PRPF39-202ENST00000424478 DENND6BQ8NEG7 585 aa13.2□□□□□ -0.3
PRPF39-202ENST00000424478 HEXDCQ8WVB3 486 aa13.2□□□□□ -0.3
PRPF39-202ENST00000424478 C19orf43Q9BQ61 176 aa13.2□□□□□ -0.3
PRPF39-202ENST00000424478 TLK1Q9UKI8 766 aa13.2□□□□□ -0.3
PRPF39-202ENST00000424478 WDR91A4D1P6 747 aa13.2□□□□□ -0.3
PRPF39-202ENST00000424478 TK2O00142 265 aa13.2□□□□□ -0.3
PRPF39-202ENST00000424478 CFIP05156 583 aa13.2□□□□□ -0.3
PRPF39-202ENST00000424478 ABRQ12979 859 aa13.2□□□□□ -0.3
PRPF39-202ENST00000424478 HSP90B2PQ58FF3 399 aa13.2□□□□□ -0.3
PRPF39-202ENST00000424478 ZBTB2Q8N680 514 aa13.2□□□□□ -0.3
PRPF39-202ENST00000424478 KCNJ9Q92806 393 aa13.2□□□□□ -0.3
PRPF39-202ENST00000424478 SMC6Q96SB8 1091 aa13.2□□□□□ -0.3
PRPF39-202ENST00000424478 PAIP2Q9BPZ3 127 aaKnown RBP13.2□□□□□ -0.3
PRPF39-202ENST00000424478 ACBD3Q9H3P7 528 aa13.2□□□□□ -0.3
PRPF39-202ENST00000424478 ZSCAN32Q9NX65 697 aa13.2□□□□□ -0.3
PRPF39-202ENST00000424478 SLC17A4Q9Y2C5 497 aa13.2□□□□□ -0.3
PRPF39-202ENST00000424478 PCDHB1Q9Y5F3 818 aa13.2□□□□□ -0.3
PRPF39-202ENST00000424478 NPEPPSL1A6NEC2 478 aa13.2□□□□□ -0.3
PRPF39-202ENST00000424478 NCF1BA6NI72 391 aaPredicted RBP13.2□□□□□ -0.3
PRPF39-202ENST00000424478 NCF1CA8MVU1 366 aaPredicted RBP13.2□□□□□ -0.3
PRPF39-202ENST00000424478 POLR3GO15318 223 aaPredicted RBP13.2□□□□□ -0.3
PRPF39-202ENST00000424478 NCF1P14598 390 aaPredicted RBP13.2□□□□□ -0.3
PRPF39-202ENST00000424478 RPS3P23396 243 aaKnown RBP eCLIP13.2□□□□□ -0.34e-8■■■■□ 19.6
PRPF39-202ENST00000424478 HTR1BP28222 390 aa13.2□□□□□ -0.3
PRPF39-202ENST00000424478 OAS2P29728 719 aaKnown RBP13.2□□□□□ -0.3
PRPF39-202ENST00000424478 SRP54P61011 504 aaKnown RBP13.2□□□□□ -0.3
PRPF39-202ENST00000424478 PYCR3Q53H96 274 aa13.2□□□□□ -0.3
PRPF39-202ENST00000424478 LRRTM4Q86VH4 590 aa13.2□□□□□ -0.3
PRPF39-202ENST00000424478 GALNT13Q8IUC8 556 aa13.2□□□□□ -0.3
PRPF39-202ENST00000424478 RIBC1Q8N443 379 aaPredicted RBP13.2□□□□□ -0.3
PRPF39-202ENST00000424478 TCP10LQ8TDR4 215 aa13.2□□□□□ -0.3
PRPF39-202ENST00000424478 PATE1Q8WXA2 126 aa13.2□□□□□ -0.3
PRPF39-202ENST00000424478 ASB12Q8WXK4 309 aa13.2□□□□□ -0.3
PRPF39-202ENST00000424478 PTERQ96BW5 349 aa13.2□□□□□ -0.3
PRPF39-202ENST00000424478 PKNOX2Q96KN3 472 aa13.2□□□□□ -0.3
PRPF39-202ENST00000424478 ALG9Q9H6U8 611 aa13.2□□□□□ -0.3
PRPF39-202ENST00000424478 ADAMTS6Q9UKP5 1117 aa13.2□□□□□ -0.3
PRPF39-202ENST00000424478 DMTF1Q9Y222 760 aa13.2□□□□□ -0.3
PRPF39-202ENST00000424478 CDYLQ9Y232 598 aa13.2□□□□□ -0.3
PRPF39-202ENST00000424478 VPS9D1Q9Y2B5 631 aa13.2□□□□□ -0.3
PRPF39-202ENST00000424478 WDR37Q9Y2I8 494 aa13.2□□□□□ -0.3
PRPF39-202ENST00000424478 ACOT9Q9Y305 439 aa13.2□□□□□ -0.3
PRPF39-202ENST00000424478 LRP4O75096 1905 aa13.19□□□□□ -0.3
PRPF39-202ENST00000424478 CCDC163A0A0D9SF12 145 aa13.19□□□□□ -0.3
PRPF39-202ENST00000424478 TMEM120BA0PK00 339 aa13.19□□□□□ -0.3
PRPF39-202ENST00000424478 NEMP2A6NFY4 417 aa13.19□□□□□ -0.3
PRPF39-202ENST00000424478 PRR33A8MZF0 331 aa13.19□□□□□ -0.3
PRPF39-202ENST00000424478 TLR4O00206 839 aa13.19□□□□□ -0.3
PRPF39-202ENST00000424478 CHUKO15111 745 aa13.19□□□□□ -0.3
PRPF39-202ENST00000424478 TSPAN12O95859 305 aa13.19□□□□□ -0.3
PRPF39-202ENST00000424478 RACK1P63244 317 aaKnown RBP13.19□□□□□ -0.3
PRPF39-202ENST00000424478 SYTL3Q4VX76 610 aa13.19□□□□□ -0.3
PRPF39-202ENST00000424478 MBOAT1Q6ZNC8 495 aa13.19□□□□□ -0.3
PRPF39-202ENST00000424478 GALNT7Q86SF2 657 aa13.19□□□□□ -0.3
PRPF39-202ENST00000424478 ZBTB44Q8NCP5 570 aa13.19□□□□□ -0.3
PRPF39-202ENST00000424478 FAM111AQ96PZ2 611 aa13.19□□□□□ -0.3
PRPF39-202ENST00000424478 CCM2Q9BSQ5 444 aa13.19□□□□□ -0.3
PRPF39-202ENST00000424478 MECRQ9BV79 373 aa13.19□□□□□ -0.3
PRPF39-202ENST00000424478 C1QTNF1Q9BXJ1 281 aa13.19□□□□□ -0.3
PRPF39-202ENST00000424478 PRDM8Q9NQV8 689 aa13.19□□□□□ -0.3
PRPF39-202ENST00000424478 IGSF5Q9NSI5 407 aa13.19□□□□□ -0.3
PRPF39-202ENST00000424478 HS3ST3A1Q9Y663 406 aa13.19□□□□□ -0.3
PRPF39-202ENST00000424478 WDFY3Q8IZQ1 3526 aa13.19□□□□□ -0.3
PRPF39-202ENST00000424478 SPTY2D1-AS1A0A0U1RR47 76 aa13.19□□□□□ -0.3
PRPF39-202ENST00000424478 COPEO14579 308 aa13.19□□□□□ -0.3
PRPF39-202ENST00000424478 AOAHP28039 575 aa13.19□□□□□ -0.3
PRPF39-202ENST00000424478 RABIFP47224 123 aa13.19□□□□□ -0.3
PRPF39-202ENST00000424478 CTBSQ01459 385 aa13.19□□□□□ -0.3
PRPF39-202ENST00000424478 BNC1Q01954 994 aa13.19□□□□□ -0.3
PRPF39-202ENST00000424478 TSNQ15631 228 aaKnown RBP13.19□□□□□ -0.3
PRPF39-202ENST00000424478 PRRT3Q5FWE3 981 aa13.19□□□□□ -0.3
PRPF39-202ENST00000424478 N4BP2L1Q5TBK1 243 aaPredicted RBP13.19□□□□□ -0.3
PRPF39-202ENST00000424478 BANPQ8N9N5 519 aa13.19□□□□□ -0.3
PRPF39-202ENST00000424478 PHC3Q8NDX5 983 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms