RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 HOOK3Q86VS8 718 aa6.14□□□□□ -1.43
SDCBP-203ENST00000424270 ZDHHC17Q8IUH5 632 aa6.14□□□□□ -1.43
SDCBP-203ENST00000424270 P3H2Q8IVL5 708 aa6.14□□□□□ -1.43
SDCBP-203ENST00000424270 ARHGEF19Q8IW93 802 aa6.14□□□□□ -1.43
SDCBP-203ENST00000424270 AOPEPQ8N6M6 819 aa6.14□□□□□ -1.43
SDCBP-203ENST00000424270 RTL3Q8N8U3 475 aaKnown RBP6.14□□□□□ -1.43
SDCBP-203ENST00000424270 MYRIPQ8NFW9 859 aa6.14□□□□□ -1.43
SDCBP-203ENST00000424270 OR1L3Q8NH93 324 aa6.14□□□□□ -1.43
SDCBP-203ENST00000424270 ECHDC3Q96DC8 303 aa6.14□□□□□ -1.43
SDCBP-203ENST00000424270 PGAP3Q96FM1 320 aaPredicted RBP6.14□□□□□ -1.43
SDCBP-203ENST00000424270 LMF1Q96S06 567 aa6.14□□□□□ -1.43
SDCBP-203ENST00000424270 AGAP2Q99490 1192 aa6.14□□□□□ -1.43
SDCBP-203ENST00000424270 TREX2Q9BQ50 279 aaPredicted RBP6.14□□□□□ -1.43
SDCBP-203ENST00000424270 UCK2Q9BZX2 261 aa6.14□□□□□ -1.43
SDCBP-203ENST00000424270 RAB33BQ9H082 229 aa6.14□□□□□ -1.43
SDCBP-203ENST00000424270 OR2AG1Q9H205 316 aa6.14□□□□□ -1.43
SDCBP-203ENST00000424270 ARFGAP3Q9NP61 516 aa6.14□□□□□ -1.43
SDCBP-203ENST00000424270 ACP6Q9NPH0 428 aa6.14□□□□□ -1.43
SDCBP-203ENST00000424270 NPDC1Q9NQX5 325 aaPredicted RBP6.14□□□□□ -1.43
SDCBP-203ENST00000424270 ZNF358Q9NW07 568 aa6.14□□□□□ -1.43
SDCBP-203ENST00000424270 CDYLQ9Y232 598 aa6.14□□□□□ -1.43
SDCBP-203ENST00000424270 PCYT1BQ9Y5K3 369 aaPredicted RBP6.14□□□□□ -1.43
SDCBP-203ENST00000424270 MDC1Q14676 2089 aaKnown RBP6.14□□□□□ -1.43
SDCBP-203ENST00000424270 MAP1AP78559 2803 aaPredicted RBP6.14□□□□□ -1.43
SDCBP-203ENST00000424270 ABCA4P78363 2273 aa6.14□□□□□ -1.43
SDCBP-203ENST00000424270 PIKFYVEQ9Y2I7 2098 aa6.13□□□□□ -1.43
SDCBP-203ENST00000424270 TTC24A2A3L6 582 aaPredicted RBP6.13□□□□□ -1.43
SDCBP-203ENST00000424270 OR6C74A6NCV1 312 aa6.13□□□□□ -1.43
SDCBP-203ENST00000424270 OR5K3A6NET4 321 aa6.13□□□□□ -1.43
SDCBP-203ENST00000424270 NPIPA5E9PKD4 350 aa6.13□□□□□ -1.43
SDCBP-203ENST00000424270 E9PLN8 166 aa6.13□□□□□ -1.43
SDCBP-203ENST00000424270 FAM72CH0Y354 149 aa6.13□□□□□ -1.43
SDCBP-203ENST00000424270 DFFAO00273 331 aa6.13□□□□□ -1.43
SDCBP-203ENST00000424270 SLC16A3O15427 465 aaKnown RBP6.13□□□□□ -1.43
SDCBP-203ENST00000424270 HTRA2O43464 458 aaPredicted RBP6.13□□□□□ -1.43
SDCBP-203ENST00000424270 ACTN4O43707 911 aaKnown RBP6.13□□□□□ -1.43
SDCBP-203ENST00000424270 CTAG2O75638 210 aa6.13□□□□□ -1.43
SDCBP-203ENST00000424270 KLHL18O94889 574 aa6.13□□□□□ -1.43
SDCBP-203ENST00000424270 SOD1P00441 154 aa6.13□□□□□ -1.43
SDCBP-203ENST00000424270 F12P00748 615 aaPredicted RBP6.13□□□□□ -1.43
SDCBP-203ENST00000424270 HOXD4P09016 255 aaPredicted RBP6.13□□□□□ -1.43
SDCBP-203ENST00000424270 CBSLP0DN79 551 aa6.13□□□□□ -1.43
SDCBP-203ENST00000424270 CHRNB4P30926 498 aa6.13□□□□□ -1.43
SDCBP-203ENST00000424270 CBSP35520 551 aa6.13□□□□□ -1.43
SDCBP-203ENST00000424270 ME1P48163 572 aa6.13□□□□□ -1.43
SDCBP-203ENST00000424270 CSNK1DP48730 415 aa6.13□□□□□ -1.43
SDCBP-203ENST00000424270 RENBPP51606 427 aa6.13□□□□□ -1.43
SDCBP-203ENST00000424270 GCNT1Q02742 428 aa6.13□□□□□ -1.43
SDCBP-203ENST00000424270 XRCC4Q13426 336 aa6.13□□□□□ -1.43
SDCBP-203ENST00000424270 KRT33BQ14525 404 aa6.13□□□□□ -1.43
SDCBP-203ENST00000424270 PTPRRQ15256 657 aa6.13□□□□□ -1.43
SDCBP-203ENST00000424270 CCDC40Q4G0X9 1142 aa6.13□□□□□ -1.43
SDCBP-203ENST00000424270 TFDP3Q5H9I0 405 aa6.13□□□□□ -1.43
SDCBP-203ENST00000424270 FAM72AQ5TYM5 149 aa6.13□□□□□ -1.43
SDCBP-203ENST00000424270 FAM72DQ6L9T8 149 aa6.13□□□□□ -1.43
SDCBP-203ENST00000424270 PAMR1Q6UXH9 720 aa6.13□□□□□ -1.43
SDCBP-203ENST00000424270 NAPRTQ6XQN6 538 aa6.13□□□□□ -1.43
SDCBP-203ENST00000424270 FAM72BQ86X60 149 aa6.13□□□□□ -1.43
SDCBP-203ENST00000424270 CDC20BQ86Y33 519 aa6.13□□□□□ -1.43
SDCBP-203ENST00000424270 VWA5B2Q8N398 1253 aa6.13□□□□□ -1.43
SDCBP-203ENST00000424270 MSANTD4Q8NCY6 345 aa6.13□□□□□ -1.43
SDCBP-203ENST00000424270 ZNF397Q8NF99 534 aaPredicted RBP6.13□□□□□ -1.43
SDCBP-203ENST00000424270 PHF10Q8WUB8 498 aaKnown RBP6.13□□□□□ -1.43
SDCBP-203ENST00000424270 MBD6Q96DN6 1003 aa6.13□□□□□ -1.43
SDCBP-203ENST00000424270 PAGE5Q96GU1 130 aa6.13□□□□□ -1.43
SDCBP-203ENST00000424270 CELF6Q96J87 481 aaKnown RBP6.13□□□□□ -1.43
SDCBP-203ENST00000424270 TMX3Q96JJ7 454 aa6.13□□□□□ -1.43
SDCBP-203ENST00000424270 VKORC1Q9BQB6 163 aa6.13□□□□□ -1.43
SDCBP-203ENST00000424270 AP1M1Q9BXS5 423 aa6.13□□□□□ -1.43
SDCBP-203ENST00000424270 CARD9Q9H257 536 aa6.13□□□□□ -1.43
SDCBP-203ENST00000424270 DEF6Q9H4E7 631 aa6.13□□□□□ -1.43
SDCBP-203ENST00000424270 CATSPERBQ9H7T0 1116 aa6.13□□□□□ -1.43
SDCBP-203ENST00000424270 ZNF160Q9HCG1 818 aa6.13□□□□□ -1.43
SDCBP-203ENST00000424270 SYTL2Q9HCH5 934 aa6.13□□□□□ -1.43
SDCBP-203ENST00000424270 UBE2TQ9NPD8 197 aaPredicted RBP6.13□□□□□ -1.43
SDCBP-203ENST00000424270 IMP3Q9NV31 184 aaKnown RBP6.13□□□□□ -1.43
SDCBP-203ENST00000424270 IL17CQ9P0M4 197 aa6.13□□□□□ -1.43
SDCBP-203ENST00000424270 NPIPA1Q9UND3 350 aa6.13□□□□□ -1.43
SDCBP-203ENST00000424270 NSD1Q96L73 2696 aaPredicted RBP6.12□□□□□ -1.43
SDCBP-203ENST00000424270 ARHGAP42A6NI28 874 aa6.12□□□□□ -1.43
SDCBP-203ENST00000424270 USP27XA6NNY8 438 aa6.12□□□□□ -1.43
SDCBP-203ENST00000424270 SMAPO00193 183 aa6.12□□□□□ -1.43
SDCBP-203ENST00000424270 TRAFD1O14545 582 aaPredicted RBP6.12□□□□□ -1.43
SDCBP-203ENST00000424270 KMOO15229 486 aa6.12□□□□□ -1.43
SDCBP-203ENST00000424270 ZNHIT1O43257 154 aa6.12□□□□□ -1.43
SDCBP-203ENST00000424270 NUAK1O60285 661 aa6.12□□□□□ -1.43
SDCBP-203ENST00000424270 PRAMEF11O60813 436 aa6.12□□□□□ -1.43
SDCBP-203ENST00000424270 OR2B3O76000 313 aa6.12□□□□□ -1.43
SDCBP-203ENST00000424270 WFS1O76024 890 aa6.12□□□□□ -1.43
SDCBP-203ENST00000424270 USP1O94782 785 aa6.12□□□□□ -1.43
SDCBP-203ENST00000424270 ZNF202O95125 648 aa6.12□□□□□ -1.43
SDCBP-203ENST00000424270 SLC25A14O95258 325 aaPredicted RBP6.12□□□□□ -1.43
SDCBP-203ENST00000424270 PRAMEF1O95521 474 aa6.12□□□□□ -1.43
SDCBP-203ENST00000424270 ZNF30P17039 623 aa6.12□□□□□ -1.43
SDCBP-203ENST00000424270 ZNF7P17097 686 aaPredicted RBP6.12□□□□□ -1.43
SDCBP-203ENST00000424270 ZNF8P17098 575 aaPredicted RBP6.12□□□□□ -1.43
SDCBP-203ENST00000424270 ITGAXP20702 1163 aa6.12□□□□□ -1.43
SDCBP-203ENST00000424270 ALAS2P22557 587 aa6.12□□□□□ -1.43
SDCBP-203ENST00000424270 MMP11P24347 488 aa6.12□□□□□ -1.43
SDCBP-203ENST00000424270 SDC4P31431 198 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms