RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 KCNH1O95259 989 aa15.02□□□□□ -0.01
C9orf3-204ENST00000424143 ZBTB7AO95365 584 aa15.02□□□□□ -0.01
C9orf3-204ENST00000424143 HTR1AP08908 422 aa15.02□□□□□ -0.01
C9orf3-204ENST00000424143 JUNDP17535 347 aa15.02□□□□□ -0.01
C9orf3-204ENST00000424143 MAGEA11P43364 429 aa15.02□□□□□ -0.01
C9orf3-204ENST00000424143 YAP1P46937 504 aaKnown RBP15.02□□□□□ -0.01
C9orf3-204ENST00000424143 NRIP1P48552 1158 aa15.02□□□□□ -0.01
C9orf3-204ENST00000424143 TTPAP49638 278 aa15.02□□□□□ -0.01
C9orf3-204ENST00000424143 IL2P60568 153 aa15.02□□□□□ -0.01
C9orf3-204ENST00000424143 TUSC3Q13454 348 aa15.02□□□□□ -0.01
C9orf3-204ENST00000424143 ALFQ53S48 1182 aa15.02□□□□□ -0.01
C9orf3-204ENST00000424143 OTUD3Q5T2D3 398 aaPredicted RBP15.02□□□□□ -0.01
C9orf3-204ENST00000424143 UGT3A1Q6NUS8 523 aa15.02□□□□□ -0.01
C9orf3-204ENST00000424143 SLC2A7Q6PXP3 512 aa15.02□□□□□ -0.01
C9orf3-204ENST00000424143 CYP20A1Q6UW02 462 aa15.02□□□□□ -0.01
C9orf3-204ENST00000424143 HIPK1Q86Z02 1210 aa15.02□□□□□ -0.01
C9orf3-204ENST00000424143 FNDC5Q8NAU1 212 aa15.02□□□□□ -0.01
C9orf3-204ENST00000424143 BLOC1S5Q8TDH9 187 aa15.02□□□□□ -0.01
C9orf3-204ENST00000424143 KCNJ9Q92806 393 aa15.02□□□□□ -0.01
C9orf3-204ENST00000424143 MS4A4AQ96JQ5 239 aa15.02□□□□□ -0.01
C9orf3-204ENST00000424143 FUNDC2Q9BWH2 189 aa15.02□□□□□ -0.01
C9orf3-204ENST00000424143 AP5M1Q9H0R1 490 aa15.02□□□□□ -0.01
C9orf3-204ENST00000424143 GABARAPL1Q9H0R8 117 aa15.02□□□□□ -0.01
C9orf3-204ENST00000424143 ACTL8Q9H568 366 aa15.02□□□□□ -0.01
C9orf3-204ENST00000424143 SOX17Q9H6I2 414 aaPredicted RBP15.02□□□□□ -0.01
C9orf3-204ENST00000424143 INIPQ9NRY2 104 aa15.02□□□□□ -0.01
C9orf3-204ENST00000424143 IKZF3Q9UKT9 509 aa15.02□□□□□ -0.01
C9orf3-204ENST00000424143 NEUROG3Q9Y4Z2 214 aa15.02□□□□□ -0.01
C9orf3-204ENST00000424143 C1orf232A0A0U1RR37 186 aa15.01□□□□□ -0.01
C9orf3-204ENST00000424143 CASTOR2A6NHX0 329 aa15.01□□□□□ -0.01
C9orf3-204ENST00000424143 ZNF99A8MXY4 864 aaPredicted RBP15.01□□□□□ -0.01
C9orf3-204ENST00000424143 C9JVG2 144 aa15.01□□□□□ -0.01
C9orf3-204ENST00000424143 H7C0S8 307 aa15.01□□□□□ -0.01
C9orf3-204ENST00000424143 CDC7O00311 574 aa15.01□□□□□ -0.01
C9orf3-204ENST00000424143 CCL22O00626 93 aa15.01□□□□□ -0.01
C9orf3-204ENST00000424143 ADAM23O75077 832 aa15.01□□□□□ -0.01
C9orf3-204ENST00000424143 B3GAT3O94766 335 aa15.01□□□□□ -0.01
C9orf3-204ENST00000424143 WDR47O94967 919 aa15.01□□□□□ -0.01
C9orf3-204ENST00000424143 FKBP9O95302 570 aa15.01□□□□□ -0.01
C9orf3-204ENST00000424143 MOCS2O96007 188 aaPredicted RBP15.01□□□□□ -0.01
C9orf3-204ENST00000424143 TCF3P15923 654 aa15.01□□□□□ -0.01
C9orf3-204ENST00000424143 SERPINB10P48595 397 aa15.01□□□□□ -0.01
C9orf3-204ENST00000424143 PGFP49763 221 aa15.01□□□□□ -0.01
C9orf3-204ENST00000424143 RAD23AP54725 363 aa15.01□□□□□ -0.01
C9orf3-204ENST00000424143 OXCT1P55809 520 aa15.01□□□□□ -0.01
C9orf3-204ENST00000424143 ECT2LQ008S8 904 aa15.01□□□□□ -0.01
C9orf3-204ENST00000424143 YWHAHQ04917 246 aaPredicted RBP15.01□□□□□ -0.01
C9orf3-204ENST00000424143 BFSP2Q13515 415 aa15.01□□□□□ -0.01
C9orf3-204ENST00000424143 RBBP7Q16576 425 aa15.01□□□□□ -0.01
C9orf3-204ENST00000424143 CTF1Q16619 201 aa15.01□□□□□ -0.01
C9orf3-204ENST00000424143 NFE2Q16621 373 aaPredicted RBP15.01□□□□□ -0.01
C9orf3-204ENST00000424143 TRIM16LQ309B1 348 aa15.01□□□□□ -0.01
C9orf3-204ENST00000424143 AGAP7PQ5VUJ5 663 aa15.01□□□□□ -0.01
C9orf3-204ENST00000424143 ATG9BQ674R7 924 aa15.01□□□□□ -0.01
C9orf3-204ENST00000424143 FBXL22Q6P050 247 aa15.01□□□□□ -0.01
C9orf3-204ENST00000424143 PRSS48Q7RTY5 328 aa15.01□□□□□ -0.01
C9orf3-204ENST00000424143 PLPP6Q8IY26 295 aa15.01□□□□□ -0.01
C9orf3-204ENST00000424143 SETD9Q8NE22 299 aa15.01□□□□□ -0.01
C9orf3-204ENST00000424143 ZNF548Q8NEK5 533 aaPredicted RBP15.01□□□□□ -0.01
C9orf3-204ENST00000424143 BPIFB6Q8NFQ5 453 aa15.01□□□□□ -0.01
C9orf3-204ENST00000424143 OR13C4Q8NGS5 318 aa15.01□□□□□ -0.01
C9orf3-204ENST00000424143 PHF10Q8WUB8 498 aaKnown RBP15.01□□□□□ -0.01
C9orf3-204ENST00000424143 EFHD2Q96C19 240 aaPredicted RBP15.01□□□□□ -0.01
C9orf3-204ENST00000424143 ALPK1Q96QP1 1244 aa15.01□□□□□ -0.01
C9orf3-204ENST00000424143 NODALQ96S42 347 aa15.01□□□□□ -0.01
C9orf3-204ENST00000424143 ZBTB18Q99592 522 aa15.01□□□□□ -0.01
C9orf3-204ENST00000424143 GPR21Q99679 349 aa15.01□□□□□ -0.01
C9orf3-204ENST00000424143 C19orf43Q9BQ61 176 aa15.01□□□□□ -0.01
C9orf3-204ENST00000424143 SGIP1Q9BQI5 828 aa15.01□□□□□ -0.01
C9orf3-204ENST00000424143 GALPQ9UBC7 116 aa15.01□□□□□ -0.01
C9orf3-204ENST00000424143 CACNG4Q9UBN1 327 aa15.01□□□□□ -0.01
C9orf3-204ENST00000424143 TRMT6Q9UJA5 497 aaKnown RBP15.01□□□□□ -0.01
C9orf3-204ENST00000424143 BAG5Q9UL15 447 aa15.01□□□□□ -0.01
C9orf3-204ENST00000424143 TMED5Q9Y3A6 229 aa15.01□□□□□ -0.01
C9orf3-204ENST00000424143 LOC100130705A0A1B0GUX0 176 aa15□□□□□ -0.01
C9orf3-204ENST00000424143 GOLGA8CPA6NN73 597 aa15□□□□□ -0.01
C9orf3-204ENST00000424143 BTN3A1O00481 513 aa15□□□□□ -0.01
C9orf3-204ENST00000424143 LSM1O15116 133 aaKnown RBP15□□□□□ -0.01
C9orf3-204ENST00000424143 NDUFS2O75306 463 aa15□□□□□ -0.01
C9orf3-204ENST00000424143 CNTN5O94779 1100 aa15□□□□□ -0.01
C9orf3-204ENST00000424143 PRDX3P30048 256 aaKnown RBP15□□□□□ -0.01
C9orf3-204ENST00000424143 FMO4P31512 558 aa15□□□□□ -0.01
C9orf3-204ENST00000424143 OPRL1P41146 370 aa15□□□□□ -0.01
C9orf3-204ENST00000424143 CCR3P51677 355 aa15□□□□□ -0.01
C9orf3-204ENST00000424143 AFF1P51825 1210 aaKnown RBP15□□□□□ -0.01
C9orf3-204ENST00000424143 KPNA1P52294 538 aaPredicted RBP15□□□□□ -0.01
C9orf3-204ENST00000424143 ERVPABLB-1P60509 514 aa15□□□□□ -0.01
C9orf3-204ENST00000424143 MVKQ03426 396 aa15□□□□□ -0.01
C9orf3-204ENST00000424143 CD47Q08722 323 aa15□□□□□ -0.01
C9orf3-204ENST00000424143 ITGADQ13349 1161 aa15□□□□□ -0.01
C9orf3-204ENST00000424143 ZNF235Q14590 738 aa15□□□□□ -0.01
C9orf3-204ENST00000424143 EML3Q32P44 896 aa15□□□□□ -0.01
C9orf3-204ENST00000424143 MORN1Q5T089 497 aa15□□□□□ -0.01
C9orf3-204ENST00000424143 GPR149Q86SP6 731 aa15□□□□□ -0.01
C9orf3-204ENST00000424143 SPNS2Q8IVW8 549 aa15□□□□□ -0.01
C9orf3-204ENST00000424143 FAM126BQ8IXS8 530 aa15□□□□□ -0.01
C9orf3-204ENST00000424143 EID3Q8N140 333 aa15□□□□□ -0.01
C9orf3-204ENST00000424143 ZCCHC7Q8N3Z6 543 aaKnown RBP15□□□□□ -0.01
C9orf3-204ENST00000424143 PDZD8Q8NEN9 1154 aa15□□□□□ -0.01
C9orf3-204ENST00000424143 OR2T12Q8NG77 320 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms