RNA–Protein interactions for RNA: ENST00000423368.6

CNOT4-205, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT4, Length 3,297 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-205ENST00000423368 PIP4P2Q8N4L2 257 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 ARL6IP6Q8N6S5 226 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 PIK3C3Q8NEB9 887 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 WFIKKN2Q8TEU8 576 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 SLCO2A1Q92959 643 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 UBE2FQ969M7 185 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 DYNLL2Q96FJ2 89 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 SCYL1Q96KG9 808 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 TRMOQ9BU70 441 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 CINPQ9BW66 212 aaPredicted RBP6.77□□□□□ -1.33
CNOT4-205ENST00000423368 ADAMTS10Q9H324 1103 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 FAM83DQ9H4H8 585 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 GALNT9Q9HCQ5 603 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 DIABLOQ9NR28 239 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 IMPAD1Q9NX62 359 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 GGA1Q9UJY5 639 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 FBXL2Q9UKC9 423 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 TBC1D24Q9ULP9 559 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 MGAT4AQ9UM21 535 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 PEX16Q9Y5Y5 336 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 NWD2Q9ULI1 1742 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 FABP7O15540 132 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 GALR2O43603 387 aaPredicted RBP6.77□□□□□ -1.33
CNOT4-205ENST00000423368 HS6ST1O60243 411 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 HMGN1P05114 100 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 IMPDH1P20839 514 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 NRIP1P48552 1158 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 CLCN4P51793 760 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 CYP4F8P98187 520 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 GPR50Q13585 617 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 GRM4Q14833 912 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 PUM3Q15397 648 aaKnown RBP6.77□□□□□ -1.33
CNOT4-205ENST00000423368 DUSP6Q16828 381 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 HFEQ30201 348 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 C4orf46Q504U0 113 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 C6orf141Q5SZD1 244 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 OTUD1Q5VV17 481 aaPredicted RBP6.77□□□□□ -1.33
CNOT4-205ENST00000423368 ZCCHC12Q6PEW1 402 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 SUSD1Q6UWL2 747 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 AHSA2Q719I0 299 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 CEP68Q76N32 757 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 RHOT1Q8IXI2 618 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 PLD6Q8N2A8 252 aaKnown RBP6.77□□□□□ -1.33
CNOT4-205ENST00000423368 PLD5Q8N7P1 536 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 SLC44A5Q8NCS7 719 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 OR10T2Q8NGX3 314 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 ENKURQ8TC29 256 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 ZNF431Q8TF32 576 aaPredicted RBP6.77□□□□□ -1.33
CNOT4-205ENST00000423368 RNF34Q969K3 372 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 TUBGCP3Q96CW5 907 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 COQ8BQ96D53 544 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 VRK1Q99986 396 aaPredicted RBP6.77□□□□□ -1.33
CNOT4-205ENST00000423368 TUBA1CQ9BQE3 449 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 TBCDQ9BTW9 1192 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 RBCK1Q9BYM8 510 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 FAM212BQ9NTI7 297 aaPredicted RBP6.77□□□□□ -1.33
CNOT4-205ENST00000423368 FAM49BQ9NUQ9 324 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 B3GNT2Q9NY97 397 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 TMEM181Q9P2C4 612 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 GTF2IRD1Q9UHL9 959 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 SHOC2Q9UQ13 582 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 PCDHGC4Q9Y5F7 938 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 PCDHGB7Q9Y5F8 929 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 PCDHGB2Q9Y5G2 931 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 PCDHGA6Q9Y5G7 932 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 PCDHGA5Q9Y5G8 931 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 PCDHGA1Q9Y5H4 931 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 USP32Q8NFA0 1604 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 WNK3Q9BYP7 1800 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 HMX2A2RU54 273 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 KLRG2A4D1S0 409 aaPredicted RBP6.77□□□□□ -1.33
CNOT4-205ENST00000423368 WTIPA6NIX2 430 aaPredicted RBP6.77□□□□□ -1.33
CNOT4-205ENST00000423368 H3BM21 787 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 ZNF195O14628 629 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 GNB5O14775 395 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 RGS11O94810 467 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 CFDP00746 253 aaPredicted RBP6.77□□□□□ -1.33
CNOT4-205ENST00000423368 ITGB3P05106 788 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 S100A9P06702 114 aaKnown RBP6.77□□□□□ -1.33
CNOT4-205ENST00000423368 HAPLN1P10915 354 aaPredicted RBP6.77□□□□□ -1.33
CNOT4-205ENST00000423368 DARSP14868 501 aaKnown RBP6.77□□□□□ -1.33
CNOT4-205ENST00000423368 JUNDP17535 347 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 SYN1P17600 705 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 CD53P19397 219 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 PTBP1P26599 531 aaKnown RBP eCLIP6.77□□□□□ -1.338e-7■■■■□ 22.3
CNOT4-205ENST00000423368 CA5AP35218 305 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 AVPR1AP37288 418 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 HNF4AP41235 474 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 SESN2P58004 480 aaPredicted RBP6.77□□□□□ -1.33
CNOT4-205ENST00000423368 RPS7P62081 194 aaKnown RBP6.77□□□□□ -1.33
CNOT4-205ENST00000423368 PTPN11Q06124 597 aaPredicted RBP6.77□□□□□ -1.33
CNOT4-205ENST00000423368 SMAD2Q15796 467 aaKnown RBP6.77□□□□□ -1.33
CNOT4-205ENST00000423368 SNAPC1Q16533 368 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 TATDN3Q17R31 274 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 PRAMEF19Q5SWL8 479 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 TIGD7Q6NT04 549 aaPredicted RBP6.77□□□□□ -1.33
CNOT4-205ENST00000423368 ANKRD54Q6NXT1 300 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 DARS2Q6PI48 645 aaKnown RBP6.77□□□□□ -1.33
CNOT4-205ENST00000423368 SPESP1Q6UW49 350 aa6.77□□□□□ -1.33
CNOT4-205ENST00000423368 BEND4Q6ZU67 534 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms