RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 EXD3Q8N9H8 876 aa14.89□□□□□ -0.03
USB1-202ENST00000423271 PILRAQ9UKJ1 303 aa14.89□□□□□ -0.03
USB1-202ENST00000423271 JRKLQ9Y4A0 524 aa14.89□□□□□ -0.03
USB1-202ENST00000423271 CCL22O00626 93 aa14.88□□□□□ -0.03
USB1-202ENST00000423271 CAPN5O15484 640 aaPredicted RBP14.88□□□□□ -0.03
USB1-202ENST00000423271 KIF1CO43896 1103 aaKnown RBP14.88□□□□□ -0.03
USB1-202ENST00000423271 SRP72O76094 671 aaKnown RBP14.88□□□□□ -0.03
USB1-202ENST00000423271 MSH3P20585 1137 aa14.88□□□□□ -0.03
USB1-202ENST00000423271 CXCR5P32302 372 aa14.88□□□□□ -0.03
USB1-202ENST00000423271 HALP42357 657 aa14.88□□□□□ -0.03
USB1-202ENST00000423271 SEPHS1P49903 392 aa14.88□□□□□ -0.03
USB1-202ENST00000423271 ZNF140P52738 457 aaPredicted RBP14.88□□□□□ -0.03
USB1-202ENST00000423271 GDF10P55107 478 aa14.88□□□□□ -0.03
USB1-202ENST00000423271 PPP1CAP62136 330 aa14.88□□□□□ -0.03
USB1-202ENST00000423271 TMPRSS15P98073 1019 aa14.88□□□□□ -0.03
USB1-202ENST00000423271 RPE65Q16518 533 aa14.88□□□□□ -0.03
USB1-202ENST00000423271 XKR5Q6UX68 686 aa14.88□□□□□ -0.03
USB1-202ENST00000423271 CEACAM20Q6UY09 585 aa14.88□□□□□ -0.03
USB1-202ENST00000423271 TIPARPQ7Z3E1 657 aaKnown RBP14.88□□□□□ -0.03
USB1-202ENST00000423271 KLHDC8BQ8IXV7 354 aa14.88□□□□□ -0.03
USB1-202ENST00000423271 C17orf53Q8N3J3 647 aaPredicted RBP14.88□□□□□ -0.03
USB1-202ENST00000423271 FAM71DQ8N9W8 422 aa14.88□□□□□ -0.03
USB1-202ENST00000423271 TTC13Q8NBP0 860 aa14.88□□□□□ -0.03
USB1-202ENST00000423271 MED8Q96G25 268 aa14.88□□□□□ -0.03
USB1-202ENST00000423271 TEFMQ96QE5 360 aaKnown RBP14.88□□□□□ -0.03
USB1-202ENST00000423271 SPRY4Q9C004 299 aa14.88□□□□□ -0.03
USB1-202ENST00000423271 ASB8Q9H765 288 aa14.88□□□□□ -0.03
USB1-202ENST00000423271 FBXO8Q9NRD0 319 aa14.88□□□□□ -0.03
USB1-202ENST00000423271 FAM8A1Q9UBU6 413 aa14.88□□□□□ -0.03
USB1-202ENST00000423271 C5orf60A6NFR6 353 aa14.87□□□□□ -0.03
USB1-202ENST00000423271 SGTAO43765 313 aa14.87□□□□□ -0.03
USB1-202ENST00000423271 CEP104O60308 925 aa14.87□□□□□ -0.03
USB1-202ENST00000423271 KCNJ13O60928 360 aa14.87□□□□□ -0.03
USB1-202ENST00000423271 METTL18O95568 372 aa14.87□□□□□ -0.03
USB1-202ENST00000423271 PLA2G2AP14555 144 aa14.87□□□□□ -0.03
USB1-202ENST00000423271 SH3BP2P78314 561 aa14.87□□□□□ -0.03
USB1-202ENST00000423271 TBR1Q16650 682 aa14.87□□□□□ -0.03
USB1-202ENST00000423271 LONRF2Q1L5Z9 754 aa14.87□□□□□ -0.03
USB1-202ENST00000423271 DUS1LQ6P1R4 473 aaKnown RBP14.87□□□□□ -0.03
USB1-202ENST00000423271 ARHGEF18Q6ZSZ5 1173 aa14.87□□□□□ -0.03
USB1-202ENST00000423271 ZNF605Q86T29 641 aa14.87□□□□□ -0.03
USB1-202ENST00000423271 RBM12BQ8IXT5 1001 aaKnown RBP14.87□□□□□ -0.03
USB1-202ENST00000423271 TAB3Q8N5C8 712 aaPredicted RBP14.87□□□□□ -0.03
USB1-202ENST00000423271 ZSCAN1Q8NBB4 408 aa14.87□□□□□ -0.03
USB1-202ENST00000423271 SLC35B2Q8TB61 432 aa14.87□□□□□ -0.03
USB1-202ENST00000423271 ATG4AQ8WYN0 398 aa14.87□□□□□ -0.03
USB1-202ENST00000423271 SLC12A9Q9BXP2 914 aa14.87□□□□□ -0.03
USB1-202ENST00000423271 ZNF768Q9H5H4 540 aaKnown RBP14.87□□□□□ -0.03
USB1-202ENST00000423271 FAM96AQ9H5X1 160 aa14.87□□□□□ -0.03
USB1-202ENST00000423271 CRLS1Q9UJA2 301 aa14.87□□□□□ -0.03
USB1-202ENST00000423271 CFAP20Q9Y6A4 193 aaKnown RBP14.87□□□□□ -0.03
USB1-202ENST00000423271 DNMT3AQ9Y6K1 912 aaPredicted RBP14.87□□□□□ -0.03
USB1-202ENST00000423271 POLR1CO15160 346 aaPredicted RBP14.86□□□□□ -0.03
USB1-202ENST00000423271 LDB2O43679 373 aa14.86□□□□□ -0.03
USB1-202ENST00000423271 RASSF9O75901 435 aa14.86□□□□□ -0.03
USB1-202ENST00000423271 STK17BO94768 372 aa14.86□□□□□ -0.03
USB1-202ENST00000423271 CRTAMO95727 393 aa14.86□□□□□ -0.03
USB1-202ENST00000423271 DLGAP3O95886 979 aa14.86□□□□□ -0.03
USB1-202ENST00000423271 ITGB2P05107 769 aa14.86□□□□□ -0.03
USB1-202ENST00000423271 FAM87AP0C7U9 286 aa14.86□□□□□ -0.03
USB1-202ENST00000423271 MSNP26038 577 aaKnown RBP14.86□□□□□ -0.03
USB1-202ENST00000423271 FOXM1Q08050 763 aa14.86□□□□□ -0.03
USB1-202ENST00000423271 SIX1Q15475 284 aaPredicted RBP14.86□□□□□ -0.03
USB1-202ENST00000423271 KCTD11Q693B1 232 aa14.86□□□□□ -0.03
USB1-202ENST00000423271 IRGCQ6NXR0 463 aa14.86□□□□□ -0.03
USB1-202ENST00000423271 FAM92BQ6ZTR7 304 aa14.86□□□□□ -0.03
USB1-202ENST00000423271 PRSS42Q7Z5A4 293 aa14.86□□□□□ -0.03
USB1-202ENST00000423271 UNC5BQ8IZJ1 945 aa14.86□□□□□ -0.03
USB1-202ENST00000423271 NLGN4XQ8N0W4 816 aa14.86□□□□□ -0.03
USB1-202ENST00000423271 LILRA3Q8N6C8 439 aaPredicted RBP14.86□□□□□ -0.03
USB1-202ENST00000423271 NLGN4YQ8NFZ3 816 aaPredicted RBP14.86□□□□□ -0.03
USB1-202ENST00000423271 DNAJC1Q96KC8 554 aaKnown RBP14.86□□□□□ -0.03
USB1-202ENST00000423271 ZPBPQ9BS86 351 aa14.86□□□□□ -0.03
USB1-202ENST00000423271 WWP1Q9H0M0 922 aa14.86□□□□□ -0.03
USB1-202ENST00000423271 ARNT2Q9HBZ2 717 aa14.86□□□□□ -0.03
USB1-202ENST00000423271 IMP3Q9NV31 184 aaKnown RBP14.86□□□□□ -0.03
USB1-202ENST00000423271 TMEM184BQ9Y519 407 aaPredicted RBP14.86□□□□□ -0.03
USB1-202ENST00000423271 LOC101059948A0A1B0GTJ6 334 aa14.85□□□□□ -0.03
USB1-202ENST00000423271 MGAT4DA6NG13 374 aa14.85□□□□□ -0.03
USB1-202ENST00000423271 AGAP14A8MT82 685 aa14.85□□□□□ -0.03
USB1-202ENST00000423271 FGGP02679 453 aa14.85□□□□□ -0.03
USB1-202ENST00000423271 PRSS56P0CW18 603 aa14.85□□□□□ -0.03
USB1-202ENST00000423271 MTHFD1P11586 935 aaKnown RBP14.85□□□□□ -0.03
USB1-202ENST00000423271 ZNF28P17035 718 aa14.85□□□□□ -0.03
USB1-202ENST00000423271 TPH1P17752 444 aa14.85□□□□□ -0.03
USB1-202ENST00000423271 CDKN1CP49918 316 aaPredicted RBP14.85□□□□□ -0.03
USB1-202ENST00000423271 GNG11P61952 73 aa14.85□□□□□ -0.03
USB1-202ENST00000423271 PARP6Q2NL67 630 aa14.85□□□□□ -0.03
USB1-202ENST00000423271 BCL7AQ4VC05 210 aa14.85□□□□□ -0.03
USB1-202ENST00000423271 CACHD1Q5VU97 1274 aa14.85□□□□□ -0.03
USB1-202ENST00000423271 METRNLQ641Q3 311 aa14.85□□□□□ -0.03
USB1-202ENST00000423271 NXPE1Q8N323 547 aa14.85□□□□□ -0.03
USB1-202ENST00000423271 SPDYE1Q8NFV5 336 aaPredicted RBP14.85□□□□□ -0.03
USB1-202ENST00000423271 OR2L2Q8NH16 312 aa14.85□□□□□ -0.03
USB1-202ENST00000423271 C1orf54Q8WWF1 131 aa14.85□□□□□ -0.03
USB1-202ENST00000423271 ZNF514Q96K75 400 aaPredicted RBP14.85□□□□□ -0.03
USB1-202ENST00000423271 RMDN2Q96LZ7 410 aa14.85□□□□□ -0.03
USB1-202ENST00000423271 PPP1R2P1Q96PQ5 205 aa14.85□□□□□ -0.03
USB1-202ENST00000423271 INSM2Q96T92 566 aaPredicted RBP14.85□□□□□ -0.03
USB1-202ENST00000423271 ARHGAP9Q9BRR9 750 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 662.3 ms