RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 CMPK2Q5EBM0 449 aa13.15□□□□□ -0.3
MCF2L-213ENST00000421756 ANGPTL8Q6UXH0 198 aa13.15□□□□□ -0.3
MCF2L-213ENST00000421756 NKAPQ8N5F7 415 aaKnown RBP13.15□□□□□ -0.3
MCF2L-213ENST00000421756 CCDC90BQ9GZT6 254 aa13.15□□□□□ -0.3
MCF2L-213ENST00000421756 RPF2Q9H7B2 306 aaKnown RBP13.15□□□□□ -0.3
MCF2L-213ENST00000421756 ARL15Q9NXU5 204 aa13.15□□□□□ -0.3
MCF2L-213ENST00000421756 SUCOQ9UBS9 1254 aaKnown RBP13.15□□□□□ -0.3
MCF2L-213ENST00000421756 PFDN6O15212 129 aa13.15□□□□□ -0.3
MCF2L-213ENST00000421756 IDO1P14902 403 aa13.15□□□□□ -0.3
MCF2L-213ENST00000421756 SLC7A1P30825 629 aa13.15□□□□□ -0.3
MCF2L-213ENST00000421756 POLD2P49005 469 aa13.15□□□□□ -0.3
MCF2L-213ENST00000421756 MRPL58Q14197 206 aaKnown RBP13.15□□□□□ -0.3
MCF2L-213ENST00000421756 KANK2Q63ZY3 851 aa13.15□□□□□ -0.3
MCF2L-213ENST00000421756 ANKRD26P1Q6NSI1 321 aa13.15□□□□□ -0.3
MCF2L-213ENST00000421756 ZNF461Q8TAF7 563 aa13.15□□□□□ -0.3
MCF2L-213ENST00000421756 BTBD9Q96Q07 612 aa13.15□□□□□ -0.3
MCF2L-213ENST00000421756 SH3GL3Q99963 347 aa13.15□□□□□ -0.3
MCF2L-213ENST00000421756 DERL2Q9GZP9 239 aa13.15□□□□□ -0.3
MCF2L-213ENST00000421756 ASPDHA6ND91 283 aa13.15□□□□□ -0.3
MCF2L-213ENST00000421756 LOC730098B7Z3J9 87 aa13.15□□□□□ -0.3
MCF2L-213ENST00000421756 CCL16O15467 120 aa13.15□□□□□ -0.3
MCF2L-213ENST00000421756 ZBTB11O95625 1053 aaPredicted RBP13.15□□□□□ -0.3
MCF2L-213ENST00000421756 DEFB115Q30KQ5 88 aa13.15□□□□□ -0.3
MCF2L-213ENST00000421756 SPANXN4Q5MJ08 99 aa13.15□□□□□ -0.3
MCF2L-213ENST00000421756 TBPL2Q6SJ96 375 aa13.15□□□□□ -0.3
MCF2L-213ENST00000421756 LPCAT2Q7L5N7 544 aa13.15□□□□□ -0.3
MCF2L-213ENST00000421756 SNRNP27Q8WVK2 155 aaKnown RBP13.15□□□□□ -0.3
MCF2L-213ENST00000421756 IL26Q9NPH9 171 aa13.15□□□□□ -0.3
MCF2L-213ENST00000421756 ZDHHC7Q9NXF8 308 aa13.15□□□□□ -0.3
MCF2L-213ENST00000421756 VWA8A3KMH1 1905 aa13.15□□□□□ -0.31
MCF2L-213ENST00000421756 E2F6O75461 281 aa13.14□□□□□ -0.31
MCF2L-213ENST00000421756 GMNNO75496 209 aa13.14□□□□□ -0.31
MCF2L-213ENST00000421756 TSPAN12O95859 305 aa13.14□□□□□ -0.31
MCF2L-213ENST00000421756 GLUD1P00367 558 aa13.14□□□□□ -0.31
MCF2L-213ENST00000421756 HSPA1AP0DMV8 641 aaKnown RBP13.14□□□□□ -0.31
MCF2L-213ENST00000421756 HSPA1BP0DMV9 641 aaKnown RBP13.14□□□□□ -0.31
MCF2L-213ENST00000421756 MYCLP1P12525 358 aaPredicted RBP13.14□□□□□ -0.31
MCF2L-213ENST00000421756 HOXD10P28358 340 aa13.14□□□□□ -0.31
MCF2L-213ENST00000421756 TM4SF4P48230 202 aa13.14□□□□□ -0.31
MCF2L-213ENST00000421756 TMED1Q13445 227 aa13.14□□□□□ -0.31
MCF2L-213ENST00000421756 MAP7Q14244 749 aa13.14□□□□□ -0.31
MCF2L-213ENST00000421756 FAM180BQ6P0A1 224 aa13.14□□□□□ -0.31
MCF2L-213ENST00000421756 BLOC1S3Q6QNY0 202 aa13.14□□□□□ -0.31
MCF2L-213ENST00000421756 CYP20A1Q6UW02 462 aa13.14□□□□□ -0.31
MCF2L-213ENST00000421756 SGCDQ92629 289 aa13.14□□□□□ -0.31
MCF2L-213ENST00000421756 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.14□□□□□ -0.311e-6■■■■■ 60.6
MCF2L-213ENST00000421756 CHID1Q9BWS9 393 aa13.14□□□□□ -0.31
MCF2L-213ENST00000421756 SMURF2Q9HAU4 748 aa13.14□□□□□ -0.31
MCF2L-213ENST00000421756 CD300AQ9UGN4 299 aa13.14□□□□□ -0.31
MCF2L-213ENST00000421756 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.14□□□□□ -0.31
MCF2L-213ENST00000421756 GPR45Q9Y5Y3 372 aa13.14□□□□□ -0.31
MCF2L-213ENST00000421756 TRPM7Q96QT4 1865 aa13.14□□□□□ -0.31
MCF2L-213ENST00000421756 PTGES3LE9PB15 166 aa13.14□□□□□ -0.31
MCF2L-213ENST00000421756 E2F3O00716 465 aa13.14□□□□□ -0.31
MCF2L-213ENST00000421756 IGLV3-27P01718 113 aa13.14□□□□□ -0.31
MCF2L-213ENST00000421756 CYP4B1P13584 511 aa13.14□□□□□ -0.31
MCF2L-213ENST00000421756 OGNP20774 298 aaKnown RBP13.14□□□□□ -0.31
MCF2L-213ENST00000421756 RING1Q06587 406 aa13.14□□□□□ -0.31
MCF2L-213ENST00000421756 PRKG2Q13237 762 aa13.14□□□□□ -0.31
MCF2L-213ENST00000421756 SERPINA13PQ6UXR4 307 aa13.14□□□□□ -0.31
MCF2L-213ENST00000421756 ZSWIM9Q86XI8 627 aa13.14□□□□□ -0.31
MCF2L-213ENST00000421756 CATSPER1Q8NEC5 780 aa13.14□□□□□ -0.31
MCF2L-213ENST00000421756 PROKR1Q8TCW9 393 aa13.14□□□□□ -0.31
MCF2L-213ENST00000421756 IGSF21Q96ID5 467 aa13.14□□□□□ -0.31
MCF2L-213ENST00000421756 EGLN2Q96KS0 407 aa13.14□□□□□ -0.31
MCF2L-213ENST00000421756 TCF12Q99081 682 aa13.14□□□□□ -0.31
MCF2L-213ENST00000421756 VCX3AQ9NNX9 186 aa13.14□□□□□ -0.31
MCF2L-213ENST00000421756 RHBDL2Q9NX52 303 aa13.14□□□□□ -0.31
MCF2L-213ENST00000421756 ELOVL2Q9NXB9 296 aa13.14□□□□□ -0.31
MCF2L-213ENST00000421756 ZNF490Q9ULM2 529 aaPredicted RBP13.14□□□□□ -0.31
MCF2L-213ENST00000421756 CCL26Q9Y258 94 aa13.14□□□□□ -0.31
MCF2L-213ENST00000421756 TRIOO75962 3097 aa13.14□□□□□ -0.31
MCF2L-213ENST00000421756 ILVBLA1L0T0 632 aa13.14□□□□□ -0.31
MCF2L-213ENST00000421756 VILLO15195 856 aa13.14□□□□□ -0.31
MCF2L-213ENST00000421756 ELK4P28324 431 aa13.14□□□□□ -0.31
MCF2L-213ENST00000421756 AQP1P29972 269 aa13.14□□□□□ -0.31
MCF2L-213ENST00000421756 EPHX4Q8IUS5 362 aa13.14□□□□□ -0.31
MCF2L-213ENST00000421756 MARVELD2Q8N4S9 558 aa13.14□□□□□ -0.31
MCF2L-213ENST00000421756 FIBCD1Q8N539 461 aa13.14□□□□□ -0.31
MCF2L-213ENST00000421756 CYB5D2Q8WUJ1 264 aa13.14□□□□□ -0.31
MCF2L-213ENST00000421756 NSMCE2Q96MF7 247 aa13.14□□□□□ -0.31
MCF2L-213ENST00000421756 ZNF599Q96NL3 588 aa13.14□□□□□ -0.31
MCF2L-213ENST00000421756 MYOCQ99972 504 aa13.14□□□□□ -0.31
MCF2L-213ENST00000421756 ING2Q9H160 280 aa13.14□□□□□ -0.31
MCF2L-213ENST00000421756 SDR39U1Q9NRG7 319 aaPredicted RBP13.14□□□□□ -0.31
MCF2L-213ENST00000421756 OPTCQ9UBM4 332 aa13.14□□□□□ -0.31
MCF2L-213ENST00000421756 RAB26Q9ULW5 256 aa13.14□□□□□ -0.31
MCF2L-213ENST00000421756 MYRFQ9Y2G1 1151 aa13.14□□□□□ -0.31
MCF2L-213ENST00000421756 DOCK4Q8N1I0 1966 aa13.13□□□□□ -0.31
MCF2L-213ENST00000421756 NEDD8-MDP1E9PL57 170 aa13.13□□□□□ -0.31
MCF2L-213ENST00000421756 SNUPNO95149 360 aaKnown RBP13.13□□□□□ -0.31
MCF2L-213ENST00000421756 URODP06132 367 aa13.13□□□□□ -0.31
MCF2L-213ENST00000421756 UROSP10746 265 aa13.13□□□□□ -0.31
MCF2L-213ENST00000421756 ZNF7P17097 686 aaPredicted RBP13.13□□□□□ -0.31
MCF2L-213ENST00000421756 CRY1Q16526 586 aa13.13□□□□□ -0.31
MCF2L-213ENST00000421756 TRIM60Q495X7 471 aa13.13□□□□□ -0.31
MCF2L-213ENST00000421756 GPR107Q5VW38 600 aa13.13□□□□□ -0.31
MCF2L-213ENST00000421756 Q6ZVU0 165 aa13.13□□□□□ -0.31
MCF2L-213ENST00000421756 PHYKPLQ8IUZ5 450 aa13.13□□□□□ -0.31
MCF2L-213ENST00000421756 LIX1Q8N485 282 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms