RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 A0A1W2PP55 124 aa10.6□□□□□ -0.71
PTCH1-206ENST00000421141 IQCF5A8MTL0 148 aa10.6□□□□□ -0.71
PTCH1-206ENST00000421141 AP3D1O14617 1153 aa10.6□□□□□ -0.71
PTCH1-206ENST00000421141 GABRDO14764 452 aa10.6□□□□□ -0.71
PTCH1-206ENST00000421141 TFPIP10646 304 aa10.6□□□□□ -0.71
PTCH1-206ENST00000421141 ZNF8P17098 575 aaPredicted RBP10.6□□□□□ -0.71
PTCH1-206ENST00000421141 GCNT7Q6ZNI0 430 aa10.6□□□□□ -0.71
PTCH1-206ENST00000421141 ADHFE1Q8IWW8 467 aa10.6□□□□□ -0.71
PTCH1-206ENST00000421141 UBR7Q8N806 425 aa10.6□□□□□ -0.71
PTCH1-206ENST00000421141 OR10T2Q8NGX3 314 aa10.6□□□□□ -0.71
PTCH1-206ENST00000421141 MIPEPQ99797 713 aa10.6□□□□□ -0.71
PTCH1-206ENST00000421141 M0QZQ0 153 aa10.6□□□□□ -0.71
PTCH1-206ENST00000421141 CRHR1P34998 444 aa10.6□□□□□ -0.71
PTCH1-206ENST00000421141 TBCELQ5QJ74 424 aa10.6□□□□□ -0.71
PTCH1-206ENST00000421141 SLC39A11Q8N1S5 342 aa10.6□□□□□ -0.71
PTCH1-206ENST00000421141 SIDT2Q8NBJ9 832 aaKnown RBP10.6□□□□□ -0.71
PTCH1-206ENST00000421141 CMASQ8NFW8 434 aaPredicted RBP10.6□□□□□ -0.71
PTCH1-206ENST00000421141 DEAF1O75398 565 aaPredicted RBP10.6□□□□□ -0.71
PTCH1-206ENST00000421141 EPCAMP16422 314 aa10.6□□□□□ -0.71
PTCH1-206ENST00000421141 MYL12AP19105 171 aa10.6□□□□□ -0.71
PTCH1-206ENST00000421141 ADCK1Q86TW2 530 aa10.6□□□□□ -0.71
PTCH1-206ENST00000421141 TMC8Q8IU68 726 aa10.6□□□□□ -0.71
PTCH1-206ENST00000421141 MCMBPQ9BTE3 642 aa10.6□□□□□ -0.71
PTCH1-206ENST00000421141 FBXW2Q9UKT8 454 aa10.6□□□□□ -0.71
PTCH1-206ENST00000421141 LZTS1Q9Y250 596 aa10.6□□□□□ -0.71
PTCH1-206ENST00000421141 PCDHGA11Q9Y5H2 935 aa10.6□□□□□ -0.71
PTCH1-206ENST00000421141 CLCA3PQ9Y6N3 262 aa10.6□□□□□ -0.71
PTCH1-206ENST00000421141 A0A0D9SEW6 157 aa10.6□□□□□ -0.71
PTCH1-206ENST00000421141 J3KR12 359 aa10.6□□□□□ -0.71
PTCH1-206ENST00000421141 HNRNPLP14866 589 aaKnown RBP eCLIP10.6□□□□□ -0.71
PTCH1-206ENST00000421141 SUOXP51687 545 aa10.6□□□□□ -0.71
PTCH1-206ENST00000421141 LMAN2Q12907 356 aa10.6□□□□□ -0.71
PTCH1-206ENST00000421141 VPS26BQ4G0F5 336 aa10.6□□□□□ -0.71
PTCH1-206ENST00000421141 SMYD5Q6GMV2 418 aa10.6□□□□□ -0.71
PTCH1-206ENST00000421141 TTC33Q6PID6 262 aaPredicted RBP10.6□□□□□ -0.71
PTCH1-206ENST00000421141 RP9Q8TA86 221 aaKnown RBP10.6□□□□□ -0.71
PTCH1-206ENST00000421141 ADAMTS15Q8TE58 950 aa10.6□□□□□ -0.71
PTCH1-206ENST00000421141 ANKRD7Q92527 254 aa10.6□□□□□ -0.71
PTCH1-206ENST00000421141 ME2P23368 584 aa10.6□□□□□ -0.71
PTCH1-206ENST00000421141 HSPA7P48741 367 aa10.6□□□□□ -0.71
PTCH1-206ENST00000421141 NR1D2Q14995 579 aa10.6□□□□□ -0.71
PTCH1-206ENST00000421141 KCNS3Q9BQ31 491 aa10.6□□□□□ -0.71
PTCH1-206ENST00000421141 NOD2Q9HC29 1040 aa10.6□□□□□ -0.71
PTCH1-206ENST00000421141 SIX2Q9NPC8 291 aa10.6□□□□□ -0.71
PTCH1-206ENST00000421141 C19orf25Q9UFG5 118 aaPredicted RBP10.6□□□□□ -0.71
PTCH1-206ENST00000421141 SORCS3Q9UPU3 1222 aa10.6□□□□□ -0.71
PTCH1-206ENST00000421141 DGKBQ9Y6T7 804 aa10.6□□□□□ -0.71
PTCH1-206ENST00000421141 LEFTY1O75610 366 aa10.6□□□□□ -0.71
PTCH1-206ENST00000421141 HNRNPKP61978 463 aaKnown RBP eCLIP10.6□□□□□ -0.71
PTCH1-206ENST00000421141 SLC10A7Q0GE19 358 aa10.6□□□□□ -0.71
PTCH1-206ENST00000421141 NCBP2-AS2Q69YL0 99 aa10.6□□□□□ -0.71
PTCH1-206ENST00000421141 NIPAL1Q6NVV3 410 aa10.6□□□□□ -0.71
PTCH1-206ENST00000421141 SLC43A3Q8NBI5 491 aa10.6□□□□□ -0.71
PTCH1-206ENST00000421141 APOL4Q9BPW4 351 aa10.6□□□□□ -0.71
PTCH1-206ENST00000421141 ATG10Q9H0Y0 220 aa10.6□□□□□ -0.71
PTCH1-206ENST00000421141 CIDEBQ9UHD4 219 aa10.6□□□□□ -0.71
PTCH1-206ENST00000421141 KLF15Q9UIH9 416 aa10.6□□□□□ -0.71
PTCH1-206ENST00000421141 PADI2Q9Y2J8 665 aa10.6□□□□□ -0.71
PTCH1-206ENST00000421141 KIF13BQ9NQT8 1826 aa10.6□□□□□ -0.71
PTCH1-206ENST00000421141 C2orf78A6NCI8 922 aa10.59□□□□□ -0.71
PTCH1-206ENST00000421141 CLDN7O95471 211 aa10.59□□□□□ -0.71
PTCH1-206ENST00000421141 UROSP10746 265 aa10.59□□□□□ -0.71
PTCH1-206ENST00000421141 HOXD13P35453 343 aa10.59□□□□□ -0.71
PTCH1-206ENST00000421141 C2orf80Q0P641 193 aa10.59□□□□□ -0.71
PTCH1-206ENST00000421141 LARS2Q15031 903 aaKnown RBP10.59□□□□□ -0.71
PTCH1-206ENST00000421141 COLEC12Q5KU26 742 aa10.59□□□□□ -0.71
PTCH1-206ENST00000421141 ZFP1Q6P2D0 407 aa10.59□□□□□ -0.71
PTCH1-206ENST00000421141 CCDC81Q6ZN84 652 aa10.59□□□□□ -0.71
PTCH1-206ENST00000421141 LRRC74BQ6ZQY2 392 aa10.59□□□□□ -0.71
PTCH1-206ENST00000421141 TCEAL8Q8IYN2 117 aa10.59□□□□□ -0.71
PTCH1-206ENST00000421141 MFSD3Q96ES6 412 aa10.59□□□□□ -0.71
PTCH1-206ENST00000421141 MMADHCQ9H3L0 296 aaPredicted RBP10.59□□□□□ -0.71
PTCH1-206ENST00000421141 NOL11Q9H8H0 719 aaKnown RBP10.59□□□□□ -0.71
PTCH1-206ENST00000421141 LRP5O75197 1615 aa10.59□□□□□ -0.71
PTCH1-206ENST00000421141 FOCADQ5VW36 1801 aa10.59□□□□□ -0.71
PTCH1-206ENST00000421141 SLC22A3O75751 556 aa10.59□□□□□ -0.71
PTCH1-206ENST00000421141 PGLSO95336 258 aa10.59□□□□□ -0.71
PTCH1-206ENST00000421141 VIPR2P41587 438 aa10.59□□□□□ -0.71
PTCH1-206ENST00000421141 DGKKQ5KSL6 1271 aa10.59□□□□□ -0.71
PTCH1-206ENST00000421141 NEK6Q9HC98 313 aa10.59□□□□□ -0.71
PTCH1-206ENST00000421141 POLR3HQ9Y535 204 aaPredicted RBP10.59□□□□□ -0.71
PTCH1-206ENST00000421141 PTPRZ1P23471 2315 aaPredicted RBP10.59□□□□□ -0.71
PTCH1-206ENST00000421141 PRAMEF11O60813 436 aa10.59□□□□□ -0.71
PTCH1-206ENST00000421141 TSNQ15631 228 aaKnown RBP10.59□□□□□ -0.71
PTCH1-206ENST00000421141 CHRNA6Q15825 494 aa10.59□□□□□ -0.71
PTCH1-206ENST00000421141 TRMT5Q32P41 509 aaKnown RBP10.59□□□□□ -0.71
PTCH1-206ENST00000421141 EMC10Q5UCC4 262 aa10.59□□□□□ -0.71
PTCH1-206ENST00000421141 TMEM126BQ8IUX1 230 aa10.59□□□□□ -0.71
PTCH1-206ENST00000421141 SLC44A1Q8WWI5 657 aa10.59□□□□□ -0.71
PTCH1-206ENST00000421141 CNBD2Q96M20 576 aa10.59□□□□□ -0.71
PTCH1-206ENST00000421141 TMEM245Q9H330 911 aa10.59□□□□□ -0.71
PTCH1-206ENST00000421141 EXOSC4Q9NPD3 245 aaKnown RBP10.59□□□□□ -0.71
PTCH1-206ENST00000421141 DDX18Q9NVP1 670 aaKnown RBP10.59□□□□□ -0.71
PTCH1-206ENST00000421141 ADGRE2Q9UHX3 823 aa10.59□□□□□ -0.71
PTCH1-206ENST00000421141 CCDC162PA2VCL2 907 aa10.59□□□□□ -0.71
PTCH1-206ENST00000421141 TULP2O00295 520 aa10.59□□□□□ -0.71
PTCH1-206ENST00000421141 GRID2O43424 1007 aa10.59□□□□□ -0.71
PTCH1-206ENST00000421141 STC2O76061 302 aa10.59□□□□□ -0.71
PTCH1-206ENST00000421141 RABIFP47224 123 aa10.59□□□□□ -0.71
PTCH1-206ENST00000421141 KIAA0930Q6ICG6 404 aaPredicted RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms