RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 USP8P40818 1118 aa8.74□□□□□ -1.01
TRIM39-206ENST00000420746 HALP42357 657 aa8.74□□□□□ -1.01
TRIM39-206ENST00000420746 PRCPP42785 496 aa8.74□□□□□ -1.01
TRIM39-206ENST00000420746 PAPOLAP51003 745 aaKnown RBP8.74□□□□□ -1.01
TRIM39-206ENST00000420746 PMS1P54277 932 aaKnown RBP8.74□□□□□ -1.01
TRIM39-206ENST00000420746 AIF1P55008 147 aa8.74□□□□□ -1.01
TRIM39-206ENST00000420746 DCDP81605 110 aaKnown RBP8.74□□□□□ -1.01
TRIM39-206ENST00000420746 TFF3Q07654 80 aa8.74□□□□□ -1.01
TRIM39-206ENST00000420746 DMPKQ09013 629 aa8.74□□□□□ -1.01
TRIM39-206ENST00000420746 TRAF2Q12933 501 aa8.74□□□□□ -1.01
TRIM39-206ENST00000420746 SEPT7Q16181 437 aaKnown RBP8.74□□□□□ -1.01
TRIM39-206ENST00000420746 CDO1Q16878 200 aa8.74□□□□□ -1.01
TRIM39-206ENST00000420746 C15orf59Q2T9L4 293 aaPredicted RBP8.74□□□□□ -1.01
TRIM39-206ENST00000420746 CCDC40Q4G0X9 1142 aa8.74□□□□□ -1.01
TRIM39-206ENST00000420746 TDRD12Q587J7 1177 aaKnown RBP8.74□□□□□ -1.01
TRIM39-206ENST00000420746 ARMC12Q5T9G4 340 aa8.74□□□□□ -1.01
TRIM39-206ENST00000420746 RHBDD2Q6NTF9 364 aa8.74□□□□□ -1.01
TRIM39-206ENST00000420746 LINC00696Q6ZRV3 163 aa8.74□□□□□ -1.01
TRIM39-206ENST00000420746 SPPL2CQ8IUH8 684 aa8.74□□□□□ -1.01
TRIM39-206ENST00000420746 SMYD4Q8IYR2 804 aaPredicted RBP8.74□□□□□ -1.01
TRIM39-206ENST00000420746 DNAAF3Q8N9W5 541 aa8.74□□□□□ -1.01
TRIM39-206ENST00000420746 WFDC11Q8NEX6 87 aa8.74□□□□□ -1.01
TRIM39-206ENST00000420746 CPLX3Q8WVH0 158 aa8.74□□□□□ -1.01
TRIM39-206ENST00000420746 PIH1D2Q8WWB5 315 aa8.74□□□□□ -1.01
TRIM39-206ENST00000420746 HAS2Q92819 552 aa8.74□□□□□ -1.01
TRIM39-206ENST00000420746 SDCCAG3Q96C92 435 aa8.74□□□□□ -1.01
TRIM39-206ENST00000420746 VKORC1Q9BQB6 163 aa8.74□□□□□ -1.01
TRIM39-206ENST00000420746 AP1M1Q9BXS5 423 aa8.74□□□□□ -1.01
TRIM39-206ENST00000420746 SLC39A8Q9C0K1 460 aa8.74□□□□□ -1.01
TRIM39-206ENST00000420746 TRIM39Q9HCM9 518 aa8.74□□□□□ -1.01
TRIM39-206ENST00000420746 NPDC1Q9NQX5 325 aaPredicted RBP8.74□□□□□ -1.01
TRIM39-206ENST00000420746 C1GALT1Q9NS00 363 aa8.74□□□□□ -1.01
TRIM39-206ENST00000420746 HRASLS2Q9NWW9 162 aa8.74□□□□□ -1.01
TRIM39-206ENST00000420746 DNAJB12Q9NXW2 375 aaKnown RBP8.74□□□□□ -1.01
TRIM39-206ENST00000420746 IFT80Q9P2H3 777 aaPredicted RBP8.74□□□□□ -1.01
TRIM39-206ENST00000420746 SLC23A2Q9UGH3 650 aa8.74□□□□□ -1.01
TRIM39-206ENST00000420746 AP1M2Q9Y6Q5 423 aa8.74□□□□□ -1.01
TRIM39-206ENST00000420746 NUP210LQ5VU65 1888 aa8.73□□□□□ -1.01
TRIM39-206ENST00000420746 C17orf113A0A1B0GUU1 675 aa8.73□□□□□ -1.01
TRIM39-206ENST00000420746 RGSL1A5PLK6 1076 aa8.73□□□□□ -1.01
TRIM39-206ENST00000420746 GOLGA8SH3BPF8 625 aa8.73□□□□□ -1.01
TRIM39-206ENST00000420746 MATN2O00339 956 aa8.73□□□□□ -1.01
TRIM39-206ENST00000420746 SOCS6O14544 535 aa8.73□□□□□ -1.01
TRIM39-206ENST00000420746 CNOT3O75175 753 aaKnown RBP8.73□□□□□ -1.01
TRIM39-206ENST00000420746 SLCO2B1O94956 709 aa8.73□□□□□ -1.01
TRIM39-206ENST00000420746 MLYCDO95822 493 aa8.73□□□□□ -1.01
TRIM39-206ENST00000420746 MYBL2P10244 700 aa8.73□□□□□ -1.01
TRIM39-206ENST00000420746 VCLP18206 1134 aa8.73□□□□□ -1.01
TRIM39-206ENST00000420746 CMA1P23946 247 aa8.73□□□□□ -1.01
TRIM39-206ENST00000420746 RPL10P27635 214 aaKnown RBP8.73□□□□□ -1.01
TRIM39-206ENST00000420746 HOXC12P31275 282 aa8.73□□□□□ -1.01
TRIM39-206ENST00000420746 PREPP48147 710 aa8.73□□□□□ -1.01
TRIM39-206ENST00000420746 KPNA2P52292 529 aaKnown RBP8.73□□□□□ -1.01
TRIM39-206ENST00000420746 KRTCAP3Q53RY4 240 aa8.73□□□□□ -1.01
TRIM39-206ENST00000420746 ATL3Q6DD88 541 aa8.73□□□□□ -1.01
TRIM39-206ENST00000420746 ARMC6Q6NXE6 501 aa8.73□□□□□ -1.01
TRIM39-206ENST00000420746 LRRTM4Q86VH4 590 aa8.73□□□□□ -1.01
TRIM39-206ENST00000420746 PYROXD2Q8N2H3 581 aa8.73□□□□□ -1.01
TRIM39-206ENST00000420746 EMC1Q8N766 993 aa8.73□□□□□ -1.01
TRIM39-206ENST00000420746 C3orf20Q8ND61 904 aa8.73□□□□□ -1.01
TRIM39-206ENST00000420746 FAM172AQ8WUF8 416 aa8.73□□□□□ -1.01
TRIM39-206ENST00000420746 ZFPM2Q8WW38 1151 aa8.73□□□□□ -1.01
TRIM39-206ENST00000420746 RXFP2Q8WXD0 754 aa8.73□□□□□ -1.01
TRIM39-206ENST00000420746 RMND5BQ96G75 393 aaPredicted RBP8.73□□□□□ -1.01
TRIM39-206ENST00000420746 THOC3Q96J01 351 aaKnown RBP8.73□□□□□ -1.01
TRIM39-206ENST00000420746 WDR24Q96S15 920 aa8.73□□□□□ -1.01
TRIM39-206ENST00000420746 DMRTA2Q96SC8 542 aa8.73□□□□□ -1.01
TRIM39-206ENST00000420746 MGME1Q9BQP7 344 aa8.73□□□□□ -1.01
TRIM39-206ENST00000420746 OR2AG1Q9H205 316 aa8.73□□□□□ -1.01
TRIM39-206ENST00000420746 SP110Q9HB58 689 aa8.73□□□□□ -1.01
TRIM39-206ENST00000420746 NOD2Q9HC29 1040 aa8.73□□□□□ -1.01
TRIM39-206ENST00000420746 MRM3Q9HC36 420 aaKnown RBP8.73□□□□□ -1.01
TRIM39-206ENST00000420746 METTL5Q9NRN9 209 aaKnown RBP8.73□□□□□ -1.01
TRIM39-206ENST00000420746 ZNF358Q9NW07 568 aa8.73□□□□□ -1.01
TRIM39-206ENST00000420746 DNAJC16Q9Y2G8 782 aa8.73□□□□□ -1.01
TRIM39-206ENST00000420746 SEC16AO15027 2179 aa8.73□□□□□ -1.01
TRIM39-206ENST00000420746 A0A0J9YYE9 177 aa8.72□□□□□ -1.01
TRIM39-206ENST00000420746 C2CD4BA6NLJ0 364 aa8.72□□□□□ -1.01
TRIM39-206ENST00000420746 MAP3K7O43318 606 aa8.72□□□□□ -1.01
TRIM39-206ENST00000420746 FZD6O60353 706 aa8.72□□□□□ -1.01
TRIM39-206ENST00000420746 KCNJ13O60928 360 aa8.72□□□□□ -1.01
TRIM39-206ENST00000420746 CTAG2O75638 210 aa8.72□□□□□ -1.01
TRIM39-206ENST00000420746 USP1O94782 785 aa8.72□□□□□ -1.01
TRIM39-206ENST00000420746 KLHL18O94889 574 aa8.72□□□□□ -1.01
TRIM39-206ENST00000420746 ZNF202O95125 648 aa8.72□□□□□ -1.01
TRIM39-206ENST00000420746 LSM8O95777 96 aaKnown RBP8.72□□□□□ -1.01
TRIM39-206ENST00000420746 TRBC1P01850 177 aa8.72□□□□□ -1.01
TRIM39-206ENST00000420746 CBSLP0DN79 551 aa8.72□□□□□ -1.01
TRIM39-206ENST00000420746 PYGBP11216 843 aa8.72□□□□□ -1.01
TRIM39-206ENST00000420746 CYP11B1P15538 503 aa8.72□□□□□ -1.01
TRIM39-206ENST00000420746 CTPS1P17812 591 aa8.72□□□□□ -1.01
TRIM39-206ENST00000420746 FDXRP22570 491 aa8.72□□□□□ -1.01
TRIM39-206ENST00000420746 PCSK6P29122 969 aa8.72□□□□□ -1.01
TRIM39-206ENST00000420746 CBSP35520 551 aa8.72□□□□□ -1.01
TRIM39-206ENST00000420746 SOX11P35716 441 aa8.72□□□□□ -1.01
TRIM39-206ENST00000420746 DGKQP52824 942 aa8.72□□□□□ -1.01
TRIM39-206ENST00000420746 CTSCP53634 463 aa8.72□□□□□ -1.01
TRIM39-206ENST00000420746 BPIFB4P59827 614 aa8.72□□□□□ -1.01
TRIM39-206ENST00000420746 PPP2R2BQ00005 443 aa8.72□□□□□ -1.01
TRIM39-206ENST00000420746 MYBPHQ13203 477 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms