RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 ZRANB3Q5FWF4 1079 aa20.19■□□□□ 0.82
PKNOX1-202ENST00000418336 CAPRIN2Q6IMN6 1127 aaKnown RBP20.19■□□□□ 0.82
PKNOX1-202ENST00000418336 C4orf22Q6V702 233 aa20.19■□□□□ 0.82
PKNOX1-202ENST00000418336 DNAAF3Q8N9W5 541 aa20.19■□□□□ 0.82
PKNOX1-202ENST00000418336 SPDYE1Q8NFV5 336 aaPredicted RBP20.19■□□□□ 0.82
PKNOX1-202ENST00000418336 SGSM3Q96HU1 749 aa20.19■□□□□ 0.82
PKNOX1-202ENST00000418336 RMDN2Q96LZ7 410 aa20.19■□□□□ 0.82
PKNOX1-202ENST00000418336 INSM2Q96T92 566 aaPredicted RBP20.19■□□□□ 0.82
PKNOX1-202ENST00000418336 CMKLR1Q99788 373 aa20.19■□□□□ 0.82
PKNOX1-202ENST00000418336 AP1M1Q9BXS5 423 aa20.19■□□□□ 0.82
PKNOX1-202ENST00000418336 B3GNT4Q9C0J1 378 aa20.19■□□□□ 0.82
PKNOX1-202ENST00000418336 EPB41L1Q9H4G0 881 aa20.19■□□□□ 0.82
PKNOX1-202ENST00000418336 STN1Q9H668 368 aaKnown RBP20.19■□□□□ 0.82
PKNOX1-202ENST00000418336 HOMER3Q9NSC5 361 aa20.19■□□□□ 0.82
PKNOX1-202ENST00000418336 TREX1Q9NSU2 369 aa20.19■□□□□ 0.82
PKNOX1-202ENST00000418336 OCIAD1Q9NX40 245 aa20.19■□□□□ 0.82
PKNOX1-202ENST00000418336 TRMT1Q9NXH9 659 aaKnown RBP20.19■□□□□ 0.82
PKNOX1-202ENST00000418336 PYCARDQ9ULZ3 195 aa20.19■□□□□ 0.82
PKNOX1-202ENST00000418336 PSMD13Q9UNM6 376 aa20.19■□□□□ 0.82
PKNOX1-202ENST00000418336 LHX6Q9UPM6 363 aa20.19■□□□□ 0.82
PKNOX1-202ENST00000418336 IGSF10Q6WRI0 2623 aa20.18■□□□□ 0.82
PKNOX1-202ENST00000418336 C17orf113A0A1B0GUU1 675 aa20.18■□□□□ 0.82
PKNOX1-202ENST00000418336 PRAMEF10O60809 474 aa20.18■□□□□ 0.82
PKNOX1-202ENST00000418336 VIPP01282 170 aa20.18■□□□□ 0.82
PKNOX1-202ENST00000418336 VCLP18206 1134 aa20.18■□□□□ 0.82
PKNOX1-202ENST00000418336 TPSB2P20231 275 aa20.18■□□□□ 0.82
PKNOX1-202ENST00000418336 MSNP26038 577 aaKnown RBP20.18■□□□□ 0.82
PKNOX1-202ENST00000418336 PBLDP30039 288 aaPredicted RBP20.18■□□□□ 0.82
PKNOX1-202ENST00000418336 ABCG1P45844 678 aa20.18■□□□□ 0.82
PKNOX1-202ENST00000418336 GFERP55789 205 aa20.18■□□□□ 0.82
PKNOX1-202ENST00000418336 TPSAB1Q15661 275 aa20.18■□□□□ 0.82
PKNOX1-202ENST00000418336 SKIDA1Q1XH10 827 aa20.18■□□□□ 0.82
PKNOX1-202ENST00000418336 PACS1Q6VY07 963 aa20.18■□□□□ 0.82
PKNOX1-202ENST00000418336 PPP1R21Q6ZMI0 780 aa20.18■□□□□ 0.82
PKNOX1-202ENST00000418336 RBM12BQ8IXT5 1001 aaKnown RBP20.18■□□□□ 0.82
PKNOX1-202ENST00000418336 CLDN19Q8N6F1 224 aa20.18■□□□□ 0.82
PKNOX1-202ENST00000418336 ACTRT1Q8TDG2 376 aa20.18■□□□□ 0.82
PKNOX1-202ENST00000418336 HEXDCQ8WVB3 486 aa20.18■□□□□ 0.82
PKNOX1-202ENST00000418336 RSC1A1Q92681 617 aa20.18■□□□□ 0.82
PKNOX1-202ENST00000418336 PEX13Q92968 403 aa20.18■□□□□ 0.82
PKNOX1-202ENST00000418336 USP7Q93009 1102 aa20.18■□□□□ 0.82
PKNOX1-202ENST00000418336 HDAC10Q969S8 669 aa20.18■□□□□ 0.82
PKNOX1-202ENST00000418336 WWP1Q9H0M0 922 aa20.18■□□□□ 0.82
PKNOX1-202ENST00000418336 SNX12Q9UMY4 172 aa20.18■□□□□ 0.82
PKNOX1-202ENST00000418336 SDK2Q58EX2 2172 aa20.18■□□□□ 0.82
PKNOX1-202ENST00000418336 KLHL33A6NCF5 533 aa20.17■□□□□ 0.82
PKNOX1-202ENST00000418336 ZNF185O15231 689 aa20.17■□□□□ 0.82
PKNOX1-202ENST00000418336 GOT2P00505 430 aaKnown RBP20.17■□□□□ 0.82
PKNOX1-202ENST00000418336 MTHFD1P11586 935 aaKnown RBP20.17■□□□□ 0.82
PKNOX1-202ENST00000418336 ARNTP27540 789 aa20.17■□□□□ 0.82
PKNOX1-202ENST00000418336 CRADDP78560 199 aa20.17■□□□□ 0.82
PKNOX1-202ENST00000418336 ITIH4Q14624 930 aa20.17■□□□□ 0.82
PKNOX1-202ENST00000418336 ANKRD22Q5VYY1 191 aa20.17■□□□□ 0.82
PKNOX1-202ENST00000418336 DUS1LQ6P1R4 473 aaKnown RBP20.17■□□□□ 0.82
PKNOX1-202ENST00000418336 DTX1Q86Y01 620 aa20.17■□□□□ 0.82
PKNOX1-202ENST00000418336 HM13Q8TCT9 377 aa20.17■□□□□ 0.82
PKNOX1-202ENST00000418336 NCSTNQ92542 709 aa20.17■□□□□ 0.82
PKNOX1-202ENST00000418336 NAF1Q96HR8 494 aaKnown RBP20.17■□□□□ 0.82
PKNOX1-202ENST00000418336 DPH1Q9BZG8 443 aa20.17■□□□□ 0.82
PKNOX1-202ENST00000418336 OR52A5Q9H2C5 316 aa20.17■□□□□ 0.82
PKNOX1-202ENST00000418336 CHRAC1Q9NRG0 131 aa20.17■□□□□ 0.82
PKNOX1-202ENST00000418336 PCDHGA3Q9Y5H0 932 aa20.17■□□□□ 0.82
PKNOX1-202ENST00000418336 E7EVH7 732 aa20.16■□□□□ 0.82
PKNOX1-202ENST00000418336 CES2O00748 559 aa20.16■□□□□ 0.82
PKNOX1-202ENST00000418336 RRP8O43159 456 aaKnown RBP20.16■□□□□ 0.82
PKNOX1-202ENST00000418336 UBXN7O94888 489 aa20.16■□□□□ 0.82
PKNOX1-202ENST00000418336 ANKRD34CP0C6C1 535 aa20.16■□□□□ 0.82
PKNOX1-202ENST00000418336 JMJD7P0C870 316 aa20.16■□□□□ 0.82
PKNOX1-202ENST00000418336 COILP38432 576 aaPredicted RBP20.16■□□□□ 0.82
PKNOX1-202ENST00000418336 CAPZBP47756 277 aa20.16■□□□□ 0.82
PKNOX1-202ENST00000418336 LEPRP48357 1165 aaKnown RBP20.16■□□□□ 0.82
PKNOX1-202ENST00000418336 BASP1P80723 227 aaKnown RBP20.16■□□□□ 0.82
PKNOX1-202ENST00000418336 TRIP13Q15645 432 aaPredicted RBP20.16■□□□□ 0.82
PKNOX1-202ENST00000418336 PDZD3Q86UT5 571 aa20.16■□□□□ 0.82
PKNOX1-202ENST00000418336 KCNE4Q8WWG9 221 aa20.16■□□□□ 0.82
PKNOX1-202ENST00000418336 DCUN1D1Q96GG9 259 aa20.16■□□□□ 0.82
PKNOX1-202ENST00000418336 AHCYL2Q96HN2 611 aaKnown RBP20.16■□□□□ 0.82
PKNOX1-202ENST00000418336 C9orf72Q96LT7 481 aa20.16■□□□□ 0.82
PKNOX1-202ENST00000418336 RAB33BQ9H082 229 aa20.16■□□□□ 0.82
PKNOX1-202ENST00000418336 SIDT1Q9NXL6 827 aaKnown RBP20.16■□□□□ 0.82
PKNOX1-202ENST00000418336 SEMA5BQ9P283 1151 aa20.16■□□□□ 0.82
PKNOX1-202ENST00000418336 ACSL5Q9ULC5 683 aa20.16■□□□□ 0.82
PKNOX1-202ENST00000418336 CFAP20Q9Y6A4 193 aaKnown RBP20.16■□□□□ 0.82
PKNOX1-202ENST00000418336 IQCJ-SCHIP1C9J366 451 aaPredicted RBP20.15■□□□□ 0.82
PKNOX1-202ENST00000418336 PGRMC1O00264 195 aaKnown RBP20.15■□□□□ 0.82
PKNOX1-202ENST00000418336 EFSO43281 561 aa20.15■□□□□ 0.82
PKNOX1-202ENST00000418336 OR1I1O60431 355 aa20.15■□□□□ 0.82
PKNOX1-202ENST00000418336 TMEM63AO94886 807 aa20.15■□□□□ 0.82
PKNOX1-202ENST00000418336 TYRP1P17643 537 aa20.15■□□□□ 0.82
PKNOX1-202ENST00000418336 MAPK9P45984 424 aa20.15■□□□□ 0.82
PKNOX1-202ENST00000418336 LMAN1P49257 510 aa20.15■□□□□ 0.82
PKNOX1-202ENST00000418336 PPP1CAP62136 330 aa20.15■□□□□ 0.82
PKNOX1-202ENST00000418336 PCID2Q5JVF3 399 aa20.15■□□□□ 0.82
PKNOX1-202ENST00000418336 LRRC8BQ6P9F7 803 aa20.15■□□□□ 0.82
PKNOX1-202ENST00000418336 TAS2R42Q7RTR8 314 aa20.15■□□□□ 0.82
PKNOX1-202ENST00000418336 GSTA5Q7RTV2 222 aa20.15■□□□□ 0.82
PKNOX1-202ENST00000418336 TRIM48Q8IWZ4 208 aa20.15■□□□□ 0.82
PKNOX1-202ENST00000418336 AGBL5Q8NDL9 886 aa20.15■□□□□ 0.82
PKNOX1-202ENST00000418336 SNRNP27Q8WVK2 155 aaKnown RBP20.15■□□□□ 0.82
PKNOX1-202ENST00000418336 JPH3Q8WXH2 748 aaPredicted RBP20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms