RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 MINDY1Q8N5J2 469 aa8.33□□□□□ -1.08
TRIM48-201ENST00000417545 ZBTB2Q8N680 514 aa8.33□□□□□ -1.08
TRIM48-201ENST00000417545 SUMF1Q8NBK3 374 aa8.33□□□□□ -1.08
TRIM48-201ENST00000417545 HNRNPLLQ8WVV9 542 aaKnown RBP8.33□□□□□ -1.08
TRIM48-201ENST00000417545 GLMNQ92990 594 aa8.33□□□□□ -1.08
TRIM48-201ENST00000417545 TCEAL3Q969E4 200 aa8.33□□□□□ -1.08
TRIM48-201ENST00000417545 FOPNLQ96NB1 174 aa8.33□□□□□ -1.08
TRIM48-201ENST00000417545 TIMM29Q9BSF4 260 aa8.33□□□□□ -1.08
TRIM48-201ENST00000417545 AARSD1Q9BTE6 412 aaKnown RBP8.33□□□□□ -1.08
TRIM48-201ENST00000417545 EDEM2Q9BV94 578 aa8.33□□□□□ -1.08
TRIM48-201ENST00000417545 TXLNGYQ9BZA5 131 aa8.33□□□□□ -1.08
TRIM48-201ENST00000417545 STN1Q9H668 368 aaKnown RBP8.33□□□□□ -1.08
TRIM48-201ENST00000417545 PLAC1Q9HBJ0 212 aa8.33□□□□□ -1.08
TRIM48-201ENST00000417545 CAPN10Q9HC96 672 aa8.33□□□□□ -1.08
TRIM48-201ENST00000417545 SMYD2Q9NRG4 433 aa8.33□□□□□ -1.08
TRIM48-201ENST00000417545 SEMA4GQ9NTN9 838 aa8.33□□□□□ -1.08
TRIM48-201ENST00000417545 SPATS2LQ9NUQ6 558 aaKnown RBP8.33□□□□□ -1.08
TRIM48-201ENST00000417545 TRNAU1APQ9NX07 287 aaKnown RBP8.33□□□□□ -1.08
TRIM48-201ENST00000417545 TBK1Q9UHD2 729 aa8.33□□□□□ -1.08
TRIM48-201ENST00000417545 SLC24A2Q9UI40 661 aa8.33□□□□□ -1.08
TRIM48-201ENST00000417545 TLK1Q9UKI8 766 aa8.33□□□□□ -1.08
TRIM48-201ENST00000417545 PSAT1Q9Y617 370 aa8.33□□□□□ -1.08
TRIM48-201ENST00000417545 DNMT3AQ9Y6K1 912 aaPredicted RBP8.33□□□□□ -1.08
TRIM48-201ENST00000417545 PRSS21Q9Y6M0 314 aa8.33□□□□□ -1.08
TRIM48-201ENST00000417545 DGKBQ9Y6T7 804 aa8.33□□□□□ -1.08
TRIM48-201ENST00000417545 PIKFYVEQ9Y2I7 2098 aa8.32□□□□□ -1.08
TRIM48-201ENST00000417545 IQCF5A8MTL0 148 aa8.32□□□□□ -1.08
TRIM48-201ENST00000417545 B4DGG1 531 aa8.32□□□□□ -1.08
TRIM48-201ENST00000417545 RASGRF2O14827 1237 aa8.32□□□□□ -1.08
TRIM48-201ENST00000417545 LIN7AO14910 233 aaPredicted RBP8.32□□□□□ -1.08
TRIM48-201ENST00000417545 CHUKO15111 745 aa8.32□□□□□ -1.08
TRIM48-201ENST00000417545 FFAR2O15552 330 aa8.32□□□□□ -1.08
TRIM48-201ENST00000417545 LRP3O75074 770 aa8.32□□□□□ -1.08
TRIM48-201ENST00000417545 CDH16O75309 829 aa8.32□□□□□ -1.08
TRIM48-201ENST00000417545 FAM155BO75949 473 aa8.32□□□□□ -1.08
TRIM48-201ENST00000417545 ITGA2BP08514 1039 aa8.32□□□□□ -1.08
TRIM48-201ENST00000417545 ZNF806P0C7X5 589 aa8.32□□□□□ -1.08
TRIM48-201ENST00000417545 ATP5DP30049 168 aa8.32□□□□□ -1.08
TRIM48-201ENST00000417545 PI4KAP42356 2102 aa8.32□□□□□ -1.08
TRIM48-201ENST00000417545 ADARP55265 1226 aaKnown RBP8.32□□□□□ -1.08
TRIM48-201ENST00000417545 IRX4P78413 519 aa8.32□□□□□ -1.08
TRIM48-201ENST00000417545 ARHGAP8P85298 464 aa8.32□□□□□ -1.08
TRIM48-201ENST00000417545 CTBSQ01459 385 aa8.32□□□□□ -1.08
TRIM48-201ENST00000417545 POU4F1Q01851 419 aa8.32□□□□□ -1.08
TRIM48-201ENST00000417545 PLOD1Q02809 727 aaPredicted RBP8.32□□□□□ -1.08
TRIM48-201ENST00000417545 HSPA14Q0VDF9 509 aa8.32□□□□□ -1.08
TRIM48-201ENST00000417545 BMPR2Q13873 1038 aa8.32□□□□□ -1.08
TRIM48-201ENST00000417545 SF3A2Q15428 464 aaKnown RBP8.32□□□□□ -1.08
TRIM48-201ENST00000417545 UAP1L1Q3KQV9 507 aa8.32□□□□□ -1.08
TRIM48-201ENST00000417545 CTSL3PQ5NE16 218 aa8.32□□□□□ -1.08
TRIM48-201ENST00000417545 MROH9Q5TGP6 573 aa8.32□□□□□ -1.08
TRIM48-201ENST00000417545 LRRC8EQ6NSJ5 796 aa8.32□□□□□ -1.08
TRIM48-201ENST00000417545 HDXQ7Z353 690 aa8.32□□□□□ -1.08
TRIM48-201ENST00000417545 ZC3HC1Q86WB0 502 aaKnown RBP8.32□□□□□ -1.08
TRIM48-201ENST00000417545 RIBC1Q8N443 379 aaPredicted RBP8.32□□□□□ -1.08
TRIM48-201ENST00000417545 DCLK2Q8N568 766 aa8.32□□□□□ -1.08
TRIM48-201ENST00000417545 ZNF548Q8NEK5 533 aaPredicted RBP8.32□□□□□ -1.08
TRIM48-201ENST00000417545 FAM46DQ8NEK8 389 aa8.32□□□□□ -1.08
TRIM48-201ENST00000417545 OR2L2Q8NH16 312 aa8.32□□□□□ -1.08
TRIM48-201ENST00000417545 OR2W6PQ8NHA6 318 aa8.32□□□□□ -1.08
TRIM48-201ENST00000417545 ASZ1Q8WWH4 475 aa8.32□□□□□ -1.08
TRIM48-201ENST00000417545 SLC44A1Q8WWI5 657 aa8.32□□□□□ -1.08
TRIM48-201ENST00000417545 KCNJ9Q92806 393 aa8.32□□□□□ -1.08
TRIM48-201ENST00000417545 MTBPQ96DY7 904 aa8.32□□□□□ -1.08
TRIM48-201ENST00000417545 CCDC97Q96F63 343 aaPredicted RBP8.32□□□□□ -1.08
TRIM48-201ENST00000417545 GPR21Q99679 349 aa8.32□□□□□ -1.08
TRIM48-201ENST00000417545 LRRC61Q9BV99 259 aa8.32□□□□□ -1.08
TRIM48-201ENST00000417545 FUT8Q9BYC5 575 aa8.32□□□□□ -1.08
TRIM48-201ENST00000417545 ZMYND15Q9H091 742 aa8.32□□□□□ -1.08
TRIM48-201ENST00000417545 TMEM168Q9H0V1 697 aa8.32□□□□□ -1.08
TRIM48-201ENST00000417545 P2RY12Q9H244 342 aa8.32□□□□□ -1.08
TRIM48-201ENST00000417545 DPEP2Q9H4A9 486 aa8.32□□□□□ -1.08
TRIM48-201ENST00000417545 TMEM9BQ9NQ34 198 aa8.32□□□□□ -1.08
TRIM48-201ENST00000417545 GPR27Q9NS67 375 aa8.32□□□□□ -1.08
TRIM48-201ENST00000417545 EVA1BQ9NVM1 165 aa8.32□□□□□ -1.08
TRIM48-201ENST00000417545 VWA7Q9Y334 891 aa8.32□□□□□ -1.08
TRIM48-201ENST00000417545 MUC3AQ02505 3323 aa8.32□□□□□ -1.08
TRIM48-201ENST00000417545 ZFC3H1O60293 1989 aaKnown RBP8.32□□□□□ -1.08
TRIM48-201ENST00000417545 A0A1B0GTQ1 180 aa8.31□□□□□ -1.08
TRIM48-201ENST00000417545 C17orf113A0A1B0GUU1 675 aa8.31□□□□□ -1.08
TRIM48-201ENST00000417545 TRIM49D1C9J1S8 452 aa8.31□□□□□ -1.08
TRIM48-201ENST00000417545 RGS16O15492 202 aaPredicted RBP8.31□□□□□ -1.08
TRIM48-201ENST00000417545 PIAS2O75928 621 aa8.31□□□□□ -1.08
TRIM48-201ENST00000417545 SHBGP04278 402 aa8.31□□□□□ -1.08
TRIM48-201ENST00000417545 SNRPAP09012 282 aaKnown RBP8.31□□□□□ -1.08
TRIM48-201ENST00000417545 NUDT17P0C025 328 aa8.31□□□□□ -1.08
TRIM48-201ENST00000417545 DGKAP23743 735 aa8.31□□□□□ -1.08
TRIM48-201ENST00000417545 AK4P27144 223 aaPredicted RBP8.31□□□□□ -1.08
TRIM48-201ENST00000417545 EPHA8P29322 1005 aaPredicted RBP8.31□□□□□ -1.08
TRIM48-201ENST00000417545 TYK2P29597 1187 aa8.31□□□□□ -1.08
TRIM48-201ENST00000417545 SKIV2L2P42285 1042 aaKnown RBP8.31□□□□□ -1.08
TRIM48-201ENST00000417545 PREPP48147 710 aa8.31□□□□□ -1.08
TRIM48-201ENST00000417545 NHLH1Q02575 133 aa8.31□□□□□ -1.08
TRIM48-201ENST00000417545 NFE2L1Q14494 772 aa8.31□□□□□ -1.08
TRIM48-201ENST00000417545 CSRP2Q16527 193 aa8.31□□□□□ -1.08
TRIM48-201ENST00000417545 ZNF423Q2M1K9 1284 aa8.31□□□□□ -1.08
TRIM48-201ENST00000417545 DEFB133Q30KQ1 61 aa8.31□□□□□ -1.08
TRIM48-201ENST00000417545 PLEKHS1Q5SXH7 462 aa8.31□□□□□ -1.08
TRIM48-201ENST00000417545 BEND6Q5SZJ8 279 aaPredicted RBP8.31□□□□□ -1.08
TRIM48-201ENST00000417545 CEP85LQ5SZL2 805 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms