RNA–Protein interactions for RNA: ENST00000417470.1

COMMD3-BMI1-201, Transcript of COMMD3-BMI1 readthrough, humanhuman

TSL 5

Gene COMMD3-BMI1, Length 745 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1-201ENST00000417470 CHMP2BQ9UQN3 213 aa17.2■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 PCDHB1Q9Y5F3 818 aa17.2■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 ZFC3H1O60293 1989 aaKnown RBP17.19■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 CPED1A4D0V7 1026 aa17.19■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 GOLGA8KD6RF30 607 aa17.19■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 GOLGA8TH3BQL2 631 aa17.19■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 LIN7AO14910 233 aaPredicted RBP17.19■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 S1PR4O95977 384 aa17.19■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 BRAFP15056 766 aa17.19■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 NFE2L1Q14494 772 aa17.19■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.19■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 ZNF449Q6P9G9 518 aa17.19■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 FAM83HQ6ZRV2 1179 aaPredicted RBP17.19■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 EFL1Q7Z2Z2 1120 aaKnown RBP17.19■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 RAB44Q7Z6P3 723 aaPredicted RBP17.19■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 GALNT7Q86SF2 657 aa17.19■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 LDB1Q86U70 411 aaPredicted RBP17.19■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 SLC9B2Q86UD5 537 aa17.19■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 KCNMB4Q86W47 210 aa17.19■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 SFTPA2Q8IWL1 248 aa17.19■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 SLC37A2Q8TED4 501 aa17.19■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 LPGAT1Q92604 370 aa17.19■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 TSSK1BQ9BXA7 367 aa17.19■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 OSGEPL1Q9H4B0 414 aa17.19■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 UCK1Q9HA47 277 aa17.19■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 EPB41L5Q9HCM4 733 aa17.19■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 MOCS1Q9NZB8 636 aa17.19■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 LRIT1Q9P2V4 623 aa17.19■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 RNF215Q9Y6U7 377 aa17.19■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 H3BMM5 538 aa17.18■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 ZW10O43264 779 aa17.18■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 SNX2O60749 519 aa17.18■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 ESR1P03372 595 aa17.18■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 ADRB1P08588 477 aa17.18■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 GSTA2P09210 222 aa17.18■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 LEPRP48357 1165 aaKnown RBP17.18■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 CD151P48509 253 aa17.18■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 MAZP56270 477 aaKnown RBP17.18■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 UBE2IP63279 158 aaKnown RBP17.18■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 SMAD1Q15797 465 aaKnown RBP17.18■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 HSP90AA5PQ58FG0 334 aa17.18■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 PERM1Q5SV97 790 aa17.18■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 ZNF470Q6ECI4 717 aa17.18■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 CAPRIN2Q6IMN6 1127 aaKnown RBP17.18■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 KIAA0408Q6ZU52 694 aa17.18■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 RBM12BQ8IXT5 1001 aaKnown RBP17.18■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 CFAP206Q8IYR0 622 aa17.18■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 ZBED8Q8IZ13 594 aa17.18■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 C2CD4AQ8NCU7 369 aaPredicted RBP17.18■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 PYROXD1Q8WU10 500 aa17.18■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 NAT14Q8WUY8 206 aa17.18■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 PATE1Q8WXA2 126 aa17.18■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 SH3KBP1Q96B97 665 aa17.18■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 CERS2Q96G23 380 aa17.18■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 BIRC8Q96P09 236 aa17.18■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 PANX3Q96QZ0 392 aa17.18■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 TSPYL1Q9H0U9 437 aa17.18■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 STN1Q9H668 368 aaKnown RBP17.18■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 COG4Q9H9E3 785 aa17.18■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 LATS2Q9NRM7 1088 aa17.18■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 POT1Q9NUX5 634 aa17.18■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 SCHIP1Q9P0W5 487 aaPredicted RBP17.18■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 GNPTGQ9UJJ9 305 aa17.18■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 WDR37Q9Y2I8 494 aa17.18■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 ESYT3A0FGR9 886 aa17.17■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 SLC5A10A0PJK1 596 aa17.17■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 PDZK1P1A8MUH7 402 aa17.17■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 PPM1DO15297 605 aa17.17■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 RPL10P27635 214 aaKnown RBP17.17■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 SLC19A1P41440 591 aa17.17■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 HALP42357 657 aa17.17■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 SQSTM1Q13501 440 aa17.17■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 CLCA4Q14CN2 919 aa17.17■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 FASTKD3Q14CZ7 662 aaKnown RBP17.17■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 CLPPQ16740 277 aaPredicted RBP17.17■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 CEP128Q6ZU80 1094 aa17.17■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 TMPRSS12Q86WS5 348 aa17.17■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 RELL1Q8IUW5 271 aa17.17■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 OTUD6BQ8N6M0 293 aa17.17■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 GSDMBQ8TAX9 411 aa17.17■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 ZFPM2Q8WW38 1151 aa17.17■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 CCDC74AQ96AQ1 378 aa17.17■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 CCDC3Q9BQI4 270 aa17.17■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.17■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 OR52A5Q9H2C5 316 aa17.17■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 SAYSD1Q9NPB0 183 aa17.17■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 IL1RAPL1Q9NZN1 696 aa17.17■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 ZNF624Q9P2J8 865 aaPredicted RBP17.17■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 CPNE7Q9UBL6 633 aa17.17■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 FBXO5Q9UKT4 447 aa17.17■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 WASF3Q9UPY6 502 aa17.17■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 COMMD10Q9Y6G5 202 aa17.17■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 ASXL3Q9C0F0 2248 aa17.16■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 FAM221BA6H8Z2 402 aa17.16■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 RHPN2P1A8MT19 583 aa17.16■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 NTN3O00634 580 aaPredicted RBP17.16■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 KPNA5O15131 536 aa17.16■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 OPA1O60313 960 aa17.16■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 GPC4O75487 556 aa17.16■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 TCEA3O75764 348 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms