RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 SYT10Q6XYQ8 523 aa17.69■□□□□ 0.42
VCP-202ENST00000417448 DPYSL5Q9BPU6 564 aa17.69■□□□□ 0.42
VCP-202ENST00000417448 TBL1YQ9BQ87 522 aa17.69■□□□□ 0.42
VCP-202ENST00000417448 RIOK2Q9BVS4 552 aaKnown RBP17.69■□□□□ 0.42
VCP-202ENST00000417448 CASS4Q9NQ75 786 aa17.69■□□□□ 0.42
VCP-202ENST00000417448 FBXO8Q9NRD0 319 aa17.69■□□□□ 0.42
VCP-202ENST00000417448 KCND1Q9NSA2 647 aa17.69■□□□□ 0.42
VCP-202ENST00000417448 TRNAU1APQ9NX07 287 aaKnown RBP17.69■□□□□ 0.42
VCP-202ENST00000417448 SUFUQ9UMX1 484 aa17.69■□□□□ 0.42
VCP-202ENST00000417448 PLEKHM1Q9Y4G2 1056 aa17.69■□□□□ 0.42
VCP-202ENST00000417448 RPS6KL1Q9Y6S9 549 aa17.69■□□□□ 0.42
VCP-202ENST00000417448 APCP25054 2843 aa17.68■□□□□ 0.42
VCP-202ENST00000417448 CTAGE9A4FU28 777 aa17.68■□□□□ 0.42
VCP-202ENST00000417448 RFPL1O75677 317 aa17.68■□□□□ 0.42
VCP-202ENST00000417448 DNAJB5O75953 348 aa17.68■□□□□ 0.42
VCP-202ENST00000417448 RIPPLY3P57055 190 aa17.68■□□□□ 0.42
VCP-202ENST00000417448 GPLD1P80108 840 aa17.68■□□□□ 0.42
VCP-202ENST00000417448 CTBSQ01459 385 aa17.68■□□□□ 0.42
VCP-202ENST00000417448 ERV3-1Q14264 604 aa17.68■□□□□ 0.42
VCP-202ENST00000417448 P3H1Q32P28 736 aa17.68■□□□□ 0.42
VCP-202ENST00000417448 DENND5AQ6IQ26 1287 aa17.68■□□□□ 0.42
VCP-202ENST00000417448 RANBP10Q6VN20 620 aa17.68■□□□□ 0.42
VCP-202ENST00000417448 TRIM74Q86UV6 250 aa17.68■□□□□ 0.42
VCP-202ENST00000417448 TTC30BQ8N4P2 665 aa17.68■□□□□ 0.42
VCP-202ENST00000417448 CCDC89Q8N998 374 aa17.68■□□□□ 0.42
VCP-202ENST00000417448 ACTRT1Q8TDG2 376 aa17.68■□□□□ 0.42
VCP-202ENST00000417448 AP2M1Q96CW1 435 aa17.68■□□□□ 0.42
VCP-202ENST00000417448 LYSMD1Q96S90 227 aa17.68■□□□□ 0.42
VCP-202ENST00000417448 FRMD8Q9BZ67 464 aaPredicted RBP17.68■□□□□ 0.42
VCP-202ENST00000417448 ZMYND15Q9H091 742 aa17.68■□□□□ 0.42
VCP-202ENST00000417448 TRIT1Q9H3H1 467 aaKnown RBP17.68■□□□□ 0.42
VCP-202ENST00000417448 ZFYVE1Q9HBF4 777 aa17.68■□□□□ 0.42
VCP-202ENST00000417448 MAGEE1Q9HCI5 957 aa17.68■□□□□ 0.42
VCP-202ENST00000417448 TTC7AQ9ULT0 858 aaPredicted RBP17.68■□□□□ 0.42
VCP-202ENST00000417448 AAR2Q9Y312 384 aaKnown RBP17.68■□□□□ 0.42
VCP-202ENST00000417448 MAP4K5Q9Y4K4 846 aa17.68■□□□□ 0.42
VCP-202ENST00000417448 CSMD2Q7Z408 3487 aa17.68■□□□□ 0.42
VCP-202ENST00000417448 PDE2AO00408 941 aaPredicted RBP17.67■□□□□ 0.42
VCP-202ENST00000417448 DDAH2O95865 285 aa17.67■□□□□ 0.42
VCP-202ENST00000417448 ZNF28P17035 718 aa17.67■□□□□ 0.42
VCP-202ENST00000417448 DLSTP36957 453 aa17.67■□□□□ 0.42
VCP-202ENST00000417448 COILP38432 576 aaPredicted RBP17.67■□□□□ 0.42
VCP-202ENST00000417448 GRIA1P42261 906 aa17.67■□□□□ 0.42
VCP-202ENST00000417448 TNNT3P45378 269 aaPredicted RBP17.67■□□□□ 0.42
VCP-202ENST00000417448 POLD2P49005 469 aa17.67■□□□□ 0.42
VCP-202ENST00000417448 SPINT3P49223 89 aa17.67■□□□□ 0.42
VCP-202ENST00000417448 PMS2P54278 862 aa17.67■□□□□ 0.42
VCP-202ENST00000417448 MRPL49Q13405 166 aaKnown RBP17.67■□□□□ 0.42
VCP-202ENST00000417448 EIF2S3LQ2VIR3 472 aaKnown RBP17.67■□□□□ 0.42
VCP-202ENST00000417448 NADK2Q4G0N4 442 aa17.67■□□□□ 0.42
VCP-202ENST00000417448 KCTD11Q693B1 232 aa17.67■□□□□ 0.42
VCP-202ENST00000417448 RAET1GQ6H3X3 334 aa17.67■□□□□ 0.42
VCP-202ENST00000417448 DRICH1Q6PGQ1 229 aaPredicted RBP17.67■□□□□ 0.42
VCP-202ENST00000417448 TMC3Q7Z5M5 1100 aa17.67■□□□□ 0.42
VCP-202ENST00000417448 CREG2Q8IUH2 290 aa17.67■□□□□ 0.42
VCP-202ENST00000417448 GPR26Q8NDV2 337 aa17.67■□□□□ 0.42
VCP-202ENST00000417448 ZPBPQ9BS86 351 aa17.67■□□□□ 0.42
VCP-202ENST00000417448 ARFGAP3Q9NP61 516 aa17.67■□□□□ 0.42
VCP-202ENST00000417448 RAB6BQ9NRW1 208 aa17.67■□□□□ 0.42
VCP-202ENST00000417448 POLHQ9Y253 713 aa17.67■□□□□ 0.42
VCP-202ENST00000417448 ZKSCAN5Q9Y2L8 839 aa17.67■□□□□ 0.42
VCP-202ENST00000417448 SAR1BQ9Y6B6 198 aa17.67■□□□□ 0.42
VCP-202ENST00000417448 CELSR1Q9NYQ6 3014 aa17.67■□□□□ 0.42
VCP-202ENST00000417448 F8P00451 2351 aa17.66■□□□□ 0.42
VCP-202ENST00000417448 PSMD11O00231 422 aa17.66■□□□□ 0.42
VCP-202ENST00000417448 INPP4BO15327 924 aa17.66■□□□□ 0.42
VCP-202ENST00000417448 SORBS2O94875 1100 aaKnown RBP17.66■□□□□ 0.42
VCP-202ENST00000417448 SOD1P00441 154 aa17.66■□□□□ 0.42
VCP-202ENST00000417448 EPOP01588 193 aa17.66■□□□□ 0.42
VCP-202ENST00000417448 ZNF30P17039 623 aa17.66■□□□□ 0.42
VCP-202ENST00000417448 TCP1P17987 556 aaKnown RBP17.66■□□□□ 0.42
VCP-202ENST00000417448 HLA-DPA1P20036 260 aa17.66■□□□□ 0.42
VCP-202ENST00000417448 ELAVL4P26378 380 aaKnown RBP17.66■□□□□ 0.42
VCP-202ENST00000417448 CASQ1P31415 396 aa17.66■□□□□ 0.42
VCP-202ENST00000417448 ADCY8P40145 1251 aa17.66■□□□□ 0.42
VCP-202ENST00000417448 GPR1P46091 355 aa17.66■□□□□ 0.42
VCP-202ENST00000417448 MAP7Q14244 749 aa17.66■□□□□ 0.42
VCP-202ENST00000417448 PRR30Q53SZ7 412 aaPredicted RBP17.66■□□□□ 0.42
VCP-202ENST00000417448 ZNF648Q5T619 568 aaPredicted RBP17.66■□□□□ 0.42
VCP-202ENST00000417448 DOK6Q6PKX4 331 aa17.66■□□□□ 0.42
VCP-202ENST00000417448 SRRM1Q8IYB3 904 aaKnown RBP17.66■□□□□ 0.42
VCP-202ENST00000417448 ESX1Q8N693 406 aa17.66■□□□□ 0.42
VCP-202ENST00000417448 CCHCR1Q8TD31 782 aa17.66■□□□□ 0.42
VCP-202ENST00000417448 TCTN2Q96GX1 697 aa17.66■□□□□ 0.42
VCP-202ENST00000417448 TEX101Q9BY14 249 aa17.66■□□□□ 0.42
VCP-202ENST00000417448 TRIM55Q9BYV6 548 aa17.66■□□□□ 0.42
VCP-202ENST00000417448 ZNF768Q9H5H4 540 aaKnown RBP17.66■□□□□ 0.42
VCP-202ENST00000417448 CROTQ9UKG9 612 aa17.66■□□□□ 0.42
VCP-202ENST00000417448 TMEM98Q9Y2Y6 226 aa17.66■□□□□ 0.42
VCP-202ENST00000417448 PCDHB3Q9Y5E6 796 aa17.66■□□□□ 0.42
VCP-202ENST00000417448 ARL5AQ9Y689 179 aa17.66■□□□□ 0.42
VCP-202ENST00000417448 OAS3Q9Y6K5 1087 aaKnown RBP17.66■□□□□ 0.42
VCP-202ENST00000417448 ITPR3Q14573 2671 aa17.66■□□□□ 0.42
VCP-202ENST00000417448 ADGRG4Q8IZF6 3080 aa17.66■□□□□ 0.42
VCP-202ENST00000417448 ZFHX3Q15911 3703 aa17.66■□□□□ 0.42
VCP-202ENST00000417448 CCDC78A2IDD5 438 aa17.65■□□□□ 0.42
VCP-202ENST00000417448 WIPF3A6NGB9 483 aa17.65■□□□□ 0.42
VCP-202ENST00000417448 TCP11X1B4DZS4 312 aa17.65■□□□□ 0.42
VCP-202ENST00000417448 CCL22O00626 93 aa17.65■□□□□ 0.42
VCP-202ENST00000417448 KRT14P02533 472 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms