RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 COL6A6A6NMZ7 2263 aa17.5■□□□□ 0.39
CPNE1-210ENST00000416778 GOLGA6L9A6NEM1 432 aa17.5■□□□□ 0.39
CPNE1-210ENST00000416778 LIFP15018 202 aa17.5■□□□□ 0.39
CPNE1-210ENST00000416778 ZNF140P52738 457 aaPredicted RBP17.5■□□□□ 0.39
CPNE1-210ENST00000416778 TXLNBQ8N3L3 684 aa17.5■□□□□ 0.39
CPNE1-210ENST00000416778 RNF10Q8N5U6 811 aaKnown RBP17.5■□□□□ 0.39
CPNE1-210ENST00000416778 OR2L2Q8NH16 312 aa17.5■□□□□ 0.39
CPNE1-210ENST00000416778 ZDHHC12Q96GR4 267 aa17.5■□□□□ 0.39
CPNE1-210ENST00000416778 LINC00615Q96LM1 132 aaPredicted RBP17.5■□□□□ 0.39
CPNE1-210ENST00000416778 FAM96AQ9H5X1 160 aa17.5■□□□□ 0.39
CPNE1-210ENST00000416778 SEMA5BQ9P283 1151 aa17.5■□□□□ 0.39
CPNE1-210ENST00000416778 ACSL5Q9ULC5 683 aa17.5■□□□□ 0.39
CPNE1-210ENST00000416778 B8ZZF3 427 aa17.49■□□□□ 0.39
CPNE1-210ENST00000416778 STK17BO94768 372 aa17.49■□□□□ 0.39
CPNE1-210ENST00000416778 TPH1P17752 444 aa17.49■□□□□ 0.39
CPNE1-210ENST00000416778 AKT1P31749 480 aa17.49■□□□□ 0.39
CPNE1-210ENST00000416778 SEPHS1P49903 392 aa17.49■□□□□ 0.39
CPNE1-210ENST00000416778 GDF10P55107 478 aa17.49■□□□□ 0.39
CPNE1-210ENST00000416778 SH3BP2P78314 561 aa17.49■□□□□ 0.39
CPNE1-210ENST00000416778 TMPRSS15P98073 1019 aa17.49■□□□□ 0.39
CPNE1-210ENST00000416778 BCL7AQ4VC05 210 aa17.49■□□□□ 0.39
CPNE1-210ENST00000416778 CACHD1Q5VU97 1274 aa17.49■□□□□ 0.39
CPNE1-210ENST00000416778 PRSS42Q7Z5A4 293 aa17.49■□□□□ 0.39
CPNE1-210ENST00000416778 SNX20Q7Z614 316 aa17.49■□□□□ 0.39
CPNE1-210ENST00000416778 NLGN4XQ8N0W4 816 aa17.49■□□□□ 0.39
CPNE1-210ENST00000416778 NLGN4YQ8NFZ3 816 aaPredicted RBP17.49■□□□□ 0.39
CPNE1-210ENST00000416778 GPR150Q8NGU9 434 aa17.49■□□□□ 0.39
CPNE1-210ENST00000416778 TMEM121Q9BTD3 319 aa17.49■□□□□ 0.39
CPNE1-210ENST00000416778 ZNF768Q9H5H4 540 aaKnown RBP17.49■□□□□ 0.39
CPNE1-210ENST00000416778 LOC101059948A0A1B0GTJ6 334 aa17.48■□□□□ 0.39
CPNE1-210ENST00000416778 KLHL33A6NCF5 533 aa17.48■□□□□ 0.39
CPNE1-210ENST00000416778 DLGAP3O95886 979 aa17.48■□□□□ 0.39
CPNE1-210ENST00000416778 PLA2G2AP14555 144 aa17.48■□□□□ 0.39
CPNE1-210ENST00000416778 ITGB6P18564 788 aa17.48■□□□□ 0.39
CPNE1-210ENST00000416778 HADHAP40939 763 aa17.48■□□□□ 0.39
CPNE1-210ENST00000416778 CAPZBP47756 277 aa17.48■□□□□ 0.39
CPNE1-210ENST00000416778 CDKN1CP49918 316 aaPredicted RBP17.48■□□□□ 0.39
CPNE1-210ENST00000416778 IL11RAQ14626 422 aa17.48■□□□□ 0.39
CPNE1-210ENST00000416778 CAPRIN2Q6IMN6 1127 aaKnown RBP17.48■□□□□ 0.39
CPNE1-210ENST00000416778 ARHGEF18Q6ZSZ5 1173 aa17.48■□□□□ 0.39
CPNE1-210ENST00000416778 CFAP206Q8IYR0 622 aa17.48■□□□□ 0.39
CPNE1-210ENST00000416778 NXPE1Q8N323 547 aa17.48■□□□□ 0.39
CPNE1-210ENST00000416778 SPDYE1Q8NFV5 336 aaPredicted RBP17.48■□□□□ 0.39
CPNE1-210ENST00000416778 ZFPM2Q8WW38 1151 aa17.48■□□□□ 0.39
CPNE1-210ENST00000416778 ULK4Q96C45 1275 aa17.48■□□□□ 0.39
CPNE1-210ENST00000416778 WWP1Q9H0M0 922 aa17.48■□□□□ 0.39
CPNE1-210ENST00000416778 CAPN6Q9Y6Q1 641 aa17.48■□□□□ 0.39
CPNE1-210ENST00000416778 BOD1L1Q8NFC6 3051 aa17.48■□□□□ 0.39
CPNE1-210ENST00000416778 C17orf113A0A1B0GUU1 675 aa17.47■□□□□ 0.39
CPNE1-210ENST00000416778 H7C0S8 307 aa17.47■□□□□ 0.39
CPNE1-210ENST00000416778 CCL22O00626 93 aa17.47■□□□□ 0.39
CPNE1-210ENST00000416778 PSMD3O43242 534 aa17.47■□□□□ 0.39
CPNE1-210ENST00000416778 RASSF9O75901 435 aa17.47■□□□□ 0.39
CPNE1-210ENST00000416778 PTMAP06454 111 aaKnown RBP17.47■□□□□ 0.39
CPNE1-210ENST00000416778 POLBP06746 335 aa17.47■□□□□ 0.39
CPNE1-210ENST00000416778 MTHFD1P11586 935 aaKnown RBP17.47■□□□□ 0.39
CPNE1-210ENST00000416778 ATP1B2P14415 290 aaPredicted RBP17.47■□□□□ 0.39
CPNE1-210ENST00000416778 ZNF28P17035 718 aa17.47■□□□□ 0.39
CPNE1-210ENST00000416778 NELFEP18615 380 aaKnown RBP17.47■□□□□ 0.39
CPNE1-210ENST00000416778 PSMA3P25788 255 aa17.47■□□□□ 0.39
CPNE1-210ENST00000416778 PBLDP30039 288 aaPredicted RBP17.47■□□□□ 0.39
CPNE1-210ENST00000416778 STIP1P31948 543 aaKnown RBP17.47■□□□□ 0.39
CPNE1-210ENST00000416778 PPP1CAP62136 330 aa17.47■□□□□ 0.39
CPNE1-210ENST00000416778 FOXM1Q08050 763 aa17.47■□□□□ 0.39
CPNE1-210ENST00000416778 ABHD18Q0P651 414 aa17.47■□□□□ 0.39
CPNE1-210ENST00000416778 GPR33Q49SQ1 333 aa17.47■□□□□ 0.39
CPNE1-210ENST00000416778 IRGCQ6NXR0 463 aa17.47■□□□□ 0.39
CPNE1-210ENST00000416778 FAM92BQ6ZTR7 304 aa17.47■□□□□ 0.39
CPNE1-210ENST00000416778 MICALCLQ6ZW33 695 aa17.47■□□□□ 0.39
CPNE1-210ENST00000416778 UNC5BQ8IZJ1 945 aa17.47■□□□□ 0.39
CPNE1-210ENST00000416778 LILRA3Q8N6C8 439 aaPredicted RBP17.47■□□□□ 0.39
CPNE1-210ENST00000416778 HEXDCQ8WVB3 486 aa17.47■□□□□ 0.39
CPNE1-210ENST00000416778 UBE2Q2Q8WVN8 375 aa17.47■□□□□ 0.39
CPNE1-210ENST00000416778 DCUN1D1Q96GG9 259 aa17.47■□□□□ 0.39
CPNE1-210ENST00000416778 CDKN2AIPNLQ96HQ2 116 aa17.47■□□□□ 0.39
CPNE1-210ENST00000416778 SLC45A3Q96JT2 553 aa17.47■□□□□ 0.39
CPNE1-210ENST00000416778 DNAJC1Q96KC8 554 aaKnown RBP17.47■□□□□ 0.39
CPNE1-210ENST00000416778 OR6C1Q96RD1 312 aa17.47■□□□□ 0.39
CPNE1-210ENST00000416778 TRIT1Q9H3H1 467 aaKnown RBP17.47■□□□□ 0.39
CPNE1-210ENST00000416778 LRRC40Q9H9A6 602 aa17.47■□□□□ 0.39
CPNE1-210ENST00000416778 NLE1Q9NVX2 485 aaPredicted RBP17.47■□□□□ 0.39
CPNE1-210ENST00000416778 CRLS1Q9UJA2 301 aa17.47■□□□□ 0.39
CPNE1-210ENST00000416778 CFAP20Q9Y6A4 193 aaKnown RBP17.47■□□□□ 0.39
CPNE1-210ENST00000416778 IGLV3-16A0A075B6K0 115 aa17.46■□□□□ 0.39
CPNE1-210ENST00000416778 IGHV5-51A0A0C4DH38 117 aa17.46■□□□□ 0.39
CPNE1-210ENST00000416778 TRBV5-4A0A0C4DH59 114 aa17.46■□□□□ 0.39
CPNE1-210ENST00000416778 NKX2-8O15522 239 aa17.46■□□□□ 0.39
CPNE1-210ENST00000416778 RALBP11234 206 aa17.46■□□□□ 0.39
CPNE1-210ENST00000416778 FGF5P12034 268 aa17.46■□□□□ 0.39
CPNE1-210ENST00000416778 MC4RP32245 332 aa17.46■□□□□ 0.39
CPNE1-210ENST00000416778 MAP7Q14244 749 aa17.46■□□□□ 0.39
CPNE1-210ENST00000416778 ZNF658BQ4V348 819 aaPredicted RBP17.46■□□□□ 0.39
CPNE1-210ENST00000416778 LRRC45Q96CN5 670 aa17.46■□□□□ 0.39
CPNE1-210ENST00000416778 SLC41A2Q96JW4 573 aa17.46■□□□□ 0.39
CPNE1-210ENST00000416778 COPS8Q99627 209 aa17.46■□□□□ 0.39
CPNE1-210ENST00000416778 ARHGAP9Q9BRR9 750 aa17.46■□□□□ 0.39
CPNE1-210ENST00000416778 CCM2Q9BSQ5 444 aa17.46■□□□□ 0.39
CPNE1-210ENST00000416778 IMP3Q9NV31 184 aaKnown RBP17.46■□□□□ 0.39
CPNE1-210ENST00000416778 ZDHHC3Q9NYG2 299 aa17.46■□□□□ 0.39
CPNE1-210ENST00000416778 IL17BQ9UHF5 180 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms