RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 EVPLLA8MZ36 301 aa14.53□□□□□ -0.08
NCKIPSD-204ENST00000416649 AZIN1O14977 448 aa14.53□□□□□ -0.08
NCKIPSD-204ENST00000416649 GSTA4O15217 222 aa14.53□□□□□ -0.08
NCKIPSD-204ENST00000416649 MITFO75030 526 aaPredicted RBP14.53□□□□□ -0.08
NCKIPSD-204ENST00000416649 MYL3P08590 195 aa14.53□□□□□ -0.08
NCKIPSD-204ENST00000416649 RBP1P09455 135 aa14.53□□□□□ -0.08
NCKIPSD-204ENST00000416649 DEFA1P59665 94 aa14.53□□□□□ -0.08
NCKIPSD-204ENST00000416649 DEFA3P59666 94 aa14.53□□□□□ -0.08
NCKIPSD-204ENST00000416649 VARS2Q5ST30 1063 aaKnown RBP14.53□□□□□ -0.08
NCKIPSD-204ENST00000416649 ZNF544Q6NX49 715 aa14.53□□□□□ -0.08
NCKIPSD-204ENST00000416649 PKN3Q6P5Z2 889 aa14.53□□□□□ -0.08
NCKIPSD-204ENST00000416649 PRR23CQ6ZRP0 262 aa14.53□□□□□ -0.08
NCKIPSD-204ENST00000416649 LINC00299Q6ZSB3 139 aa14.53□□□□□ -0.08
NCKIPSD-204ENST00000416649 PTRH1Q86Y79 214 aaKnown RBP14.53□□□□□ -0.08
NCKIPSD-204ENST00000416649 RIMKLAQ8IXN7 391 aa14.53□□□□□ -0.08
NCKIPSD-204ENST00000416649 PARP16Q8N5Y8 322 aa14.53□□□□□ -0.08
NCKIPSD-204ENST00000416649 OR10Q1Q8NGQ4 319 aa14.53□□□□□ -0.08
NCKIPSD-204ENST00000416649 NUDT8Q8WV74 236 aa14.53□□□□□ -0.08
NCKIPSD-204ENST00000416649 C16orf70Q9BSU1 422 aa14.53□□□□□ -0.08
NCKIPSD-204ENST00000416649 NUAK2Q9H093 628 aa14.53□□□□□ -0.08
NCKIPSD-204ENST00000416649 RIBC2Q9H4K1 309 aa14.53□□□□□ -0.08
NCKIPSD-204ENST00000416649 LOC285556D6RIA3 1793 aa14.53□□□□□ -0.08
NCKIPSD-204ENST00000416649 KRT87PA6NCN2 255 aa14.53□□□□□ -0.08
NCKIPSD-204ENST00000416649 ASPDHA6ND91 283 aa14.53□□□□□ -0.08
NCKIPSD-204ENST00000416649 MTSS1O43312 755 aa14.53□□□□□ -0.08
NCKIPSD-204ENST00000416649 CDK14O94921 469 aa14.53□□□□□ -0.08
NCKIPSD-204ENST00000416649 NDST3O95803 873 aa14.53□□□□□ -0.08
NCKIPSD-204ENST00000416649 IMPDH1P20839 514 aa14.53□□□□□ -0.08
NCKIPSD-204ENST00000416649 MASP1P48740 699 aa14.53□□□□□ -0.08
NCKIPSD-204ENST00000416649 MBTD1Q05BQ5 628 aa14.53□□□□□ -0.08
NCKIPSD-204ENST00000416649 SELPLGQ14242 412 aa14.53□□□□□ -0.08
NCKIPSD-204ENST00000416649 FSCN1Q16658 493 aaKnown RBP14.53□□□□□ -0.08
NCKIPSD-204ENST00000416649 PFKFB4Q16877 469 aa14.53□□□□□ -0.08
NCKIPSD-204ENST00000416649 UNC50Q53HI1 259 aa14.53□□□□□ -0.08
NCKIPSD-204ENST00000416649 ZNF678Q5SXM1 525 aa14.53□□□□□ -0.08
NCKIPSD-204ENST00000416649 RAP1GAP2Q684P5 730 aa14.53□□□□□ -0.08
NCKIPSD-204ENST00000416649 CYP20A1Q6UW02 462 aa14.53□□□□□ -0.08
NCKIPSD-204ENST00000416649 SLC22A9Q8IVM8 553 aa14.53□□□□□ -0.08
NCKIPSD-204ENST00000416649 PTGR2Q8N8N7 351 aaPredicted RBP14.53□□□□□ -0.08
NCKIPSD-204ENST00000416649 YIPF6Q96EC8 236 aa14.53□□□□□ -0.08
NCKIPSD-204ENST00000416649 SNX18Q96RF0 628 aa14.53□□□□□ -0.08
NCKIPSD-204ENST00000416649 SDR39U1Q9NRG7 319 aaPredicted RBP14.53□□□□□ -0.08
NCKIPSD-204ENST00000416649 C3orf18Q9UK00 162 aa14.53□□□□□ -0.08
NCKIPSD-204ENST00000416649 ORC6Q9Y5N6 252 aa14.53□□□□□ -0.08
NCKIPSD-204ENST00000416649 PMPCBO75439 489 aa14.52□□□□□ -0.08
NCKIPSD-204ENST00000416649 CCDC159P0C7I6 412 aa14.52□□□□□ -0.08
NCKIPSD-204ENST00000416649 UBL4AP11441 157 aa14.52□□□□□ -0.08
NCKIPSD-204ENST00000416649 ATICP31939 592 aa14.52□□□□□ -0.08
NCKIPSD-204ENST00000416649 CYP2C18P33260 490 aa14.52□□□□□ -0.08
NCKIPSD-204ENST00000416649 SNX16P57768 344 aa14.52□□□□□ -0.08
NCKIPSD-204ENST00000416649 TPI1P60174 286 aa14.52□□□□□ -0.08
NCKIPSD-204ENST00000416649 TMEM132DQ14C87 1099 aa14.52□□□□□ -0.08
NCKIPSD-204ENST00000416649 PIM3Q86V86 326 aa14.52□□□□□ -0.08
NCKIPSD-204ENST00000416649 PROSER1Q86XN7 944 aa14.52□□□□□ -0.08
NCKIPSD-204ENST00000416649 OR8H2Q8N162 312 aa14.52□□□□□ -0.08
NCKIPSD-204ENST00000416649 NPWQ8N729 165 aa14.52□□□□□ -0.08
NCKIPSD-204ENST00000416649 TP53I13Q8NBR0 393 aaPredicted RBP14.52□□□□□ -0.08
NCKIPSD-204ENST00000416649 JPH3Q8WXH2 748 aaPredicted RBP14.52□□□□□ -0.08
NCKIPSD-204ENST00000416649 CENPIQ92674 756 aaPredicted RBP14.52□□□□□ -0.08
NCKIPSD-204ENST00000416649 FICDQ9BVA6 458 aa14.52□□□□□ -0.08
NCKIPSD-204ENST00000416649 KIFC1Q9BW19 673 aa14.52□□□□□ -0.08
NCKIPSD-204ENST00000416649 ZNF717Q9BY31 904 aaPredicted RBP14.52□□□□□ -0.08
NCKIPSD-204ENST00000416649 MUC13Q9H3R2 512 aa14.52□□□□□ -0.08
NCKIPSD-204ENST00000416649 CARS2Q9HA77 564 aaKnown RBP14.52□□□□□ -0.08
NCKIPSD-204ENST00000416649 RASSF1Q9NS23 344 aa14.52□□□□□ -0.08
NCKIPSD-204ENST00000416649 ERVH48-1M5A8F1 160 aa14.52□□□□□ -0.09
NCKIPSD-204ENST00000416649 CCL22O00626 93 aa14.52□□□□□ -0.09
NCKIPSD-204ENST00000416649 AREL1O15033 823 aa14.52□□□□□ -0.09
NCKIPSD-204ENST00000416649 ANXA6P08133 673 aa14.52□□□□□ -0.09
NCKIPSD-204ENST00000416649 IFI30P13284 250 aa14.52□□□□□ -0.09
NCKIPSD-204ENST00000416649 DDX5P17844 614 aaKnown RBP14.52□□□□□ -0.09
NCKIPSD-204ENST00000416649 ARF4P18085 180 aaPredicted RBP14.52□□□□□ -0.09
NCKIPSD-204ENST00000416649 HTR2BP41595 481 aa14.52□□□□□ -0.09
NCKIPSD-204ENST00000416649 CHRNA4P43681 627 aa14.52□□□□□ -0.09
NCKIPSD-204ENST00000416649 GPLD1P80108 840 aa14.52□□□□□ -0.09
NCKIPSD-204ENST00000416649 POU4F1Q01851 419 aa14.52□□□□□ -0.09
NCKIPSD-204ENST00000416649 YWHAHQ04917 246 aaPredicted RBP14.52□□□□□ -0.09
NCKIPSD-204ENST00000416649 GRIK4Q16099 956 aa14.52□□□□□ -0.09
NCKIPSD-204ENST00000416649 TBRG1Q3YBR2 411 aa14.52□□□□□ -0.09
NCKIPSD-204ENST00000416649 PCID2Q5JVF3 399 aa14.52□□□□□ -0.09
NCKIPSD-204ENST00000416649 NEK10Q6ZWH5 1172 aa14.52□□□□□ -0.09
NCKIPSD-204ENST00000416649 BHMTQ93088 406 aa14.52□□□□□ -0.09
NCKIPSD-204ENST00000416649 EGLN2Q96KS0 407 aa14.52□□□□□ -0.09
NCKIPSD-204ENST00000416649 OSMRQ99650 979 aa14.52□□□□□ -0.09
NCKIPSD-204ENST00000416649 TUBB1Q9H4B7 451 aa14.52□□□□□ -0.09
NCKIPSD-204ENST00000416649 COMMD8Q9NX08 183 aa14.52□□□□□ -0.09
NCKIPSD-204ENST00000416649 TOR4AQ9NXH8 423 aa14.52□□□□□ -0.09
NCKIPSD-204ENST00000416649 STMN3Q9NZ72 180 aa14.52□□□□□ -0.09
NCKIPSD-204ENST00000416649 SNX10Q9Y5X0 201 aa14.52□□□□□ -0.09
NCKIPSD-204ENST00000416649 FAM92AA1XBS5 289 aa14.52□□□□□ -0.09
NCKIPSD-204ENST00000416649 ACKR2O00590 384 aa14.52□□□□□ -0.09
NCKIPSD-204ENST00000416649 TMCC2O75069 709 aa14.52□□□□□ -0.09
NCKIPSD-204ENST00000416649 DNAJB5O75953 348 aa14.52□□□□□ -0.09
NCKIPSD-204ENST00000416649 HTR3AP46098 478 aa14.52□□□□□ -0.09
NCKIPSD-204ENST00000416649 EEFSECP57772 596 aaKnown RBP14.52□□□□□ -0.09
NCKIPSD-204ENST00000416649 ACOX1Q15067 660 aa14.52□□□□□ -0.09
NCKIPSD-204ENST00000416649 CRY1Q16526 586 aa14.52□□□□□ -0.09
NCKIPSD-204ENST00000416649 DCBLD1Q8N8Z6 715 aa14.52□□□□□ -0.09
NCKIPSD-204ENST00000416649 PPHLN1Q8NEY8 458 aaKnown RBP14.52□□□□□ -0.09
NCKIPSD-204ENST00000416649 OMA1Q96E52 524 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms