RNA–Protein interactions for RNA: ENST00000415281.1

NCKIPSD-203, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-203ENST00000415281 IGFBP7Q16270 282 aa12.17□□□□□ -0.46
NCKIPSD-203ENST00000415281 DEFB109BQ30KR1 87 aa12.17□□□□□ -0.46
NCKIPSD-203ENST00000415281 GPRC6AQ5T6X5 926 aa12.17□□□□□ -0.46
NCKIPSD-203ENST00000415281 METRNLQ641Q3 311 aa12.17□□□□□ -0.46
NCKIPSD-203ENST00000415281 DENND5AQ6IQ26 1287 aa12.17□□□□□ -0.46
NCKIPSD-203ENST00000415281 TMEM220Q6QAJ8 160 aa12.17□□□□□ -0.46
NCKIPSD-203ENST00000415281 CLEC18BQ6UXF7 455 aa12.17□□□□□ -0.46
NCKIPSD-203ENST00000415281 FAM151BQ6UXP7 276 aa12.17□□□□□ -0.46
NCKIPSD-203ENST00000415281 RANBP10Q6VN20 620 aa12.17□□□□□ -0.46
NCKIPSD-203ENST00000415281 FAM92BQ6ZTR7 304 aa12.17□□□□□ -0.46
NCKIPSD-203ENST00000415281 PID1Q7Z2X4 250 aa12.17□□□□□ -0.46
NCKIPSD-203ENST00000415281 LILRA3Q8N6C8 439 aaPredicted RBP12.17□□□□□ -0.46
NCKIPSD-203ENST00000415281 CLEC18CQ8NCF0 446 aa12.17□□□□□ -0.46
NCKIPSD-203ENST00000415281 DDHD1Q8NEL9 900 aa12.17□□□□□ -0.46
NCKIPSD-203ENST00000415281 STARD8Q92502 1023 aa12.17□□□□□ -0.46
NCKIPSD-203ENST00000415281 P3H4Q92791 437 aa12.17□□□□□ -0.46
NCKIPSD-203ENST00000415281 COL26A1Q96A83 441 aa12.17□□□□□ -0.46
NCKIPSD-203ENST00000415281 ABHD17AQ96GS6 310 aa12.17□□□□□ -0.46
NCKIPSD-203ENST00000415281 ELMO2Q96JJ3 720 aa12.17□□□□□ -0.46
NCKIPSD-203ENST00000415281 SLC41A2Q96JW4 573 aa12.17□□□□□ -0.46
NCKIPSD-203ENST00000415281 QKIQ96PU8 341 aaKnown RBP eCLIP12.17□□□□□ -0.46
NCKIPSD-203ENST00000415281 STN1Q9H668 368 aaKnown RBP12.17□□□□□ -0.46
NCKIPSD-203ENST00000415281 ZNF71Q9NQZ8 489 aaPredicted RBP12.17□□□□□ -0.46
NCKIPSD-203ENST00000415281 CROTQ9UKG9 612 aa12.17□□□□□ -0.46
NCKIPSD-203ENST00000415281 PSMD13Q9UNM6 376 aa12.17□□□□□ -0.46
NCKIPSD-203ENST00000415281 HEMK1Q9Y5R4 338 aaPredicted RBP12.17□□□□□ -0.46
NCKIPSD-203ENST00000415281 RPS6KL1Q9Y6S9 549 aa12.17□□□□□ -0.46
NCKIPSD-203ENST00000415281 MIF4GDA9UHW6 222 aaKnown RBP12.16□□□□□ -0.46
NCKIPSD-203ENST00000415281 DDX3YO15523 660 aaKnown RBP12.16□□□□□ -0.46
NCKIPSD-203ENST00000415281 KIAA0754O94854 1291 aa12.16□□□□□ -0.46
NCKIPSD-203ENST00000415281 PDGFAP04085 211 aa12.16□□□□□ -0.46
NCKIPSD-203ENST00000415281 RBL1P28749 1068 aa12.16□□□□□ -0.46
NCKIPSD-203ENST00000415281 SPAM1P38567 509 aa12.16□□□□□ -0.46
NCKIPSD-203ENST00000415281 COPS2P61201 443 aa12.16□□□□□ -0.46
NCKIPSD-203ENST00000415281 FOXM1Q08050 763 aa12.16□□□□□ -0.46
NCKIPSD-203ENST00000415281 IL11RAQ14626 422 aa12.16□□□□□ -0.46
NCKIPSD-203ENST00000415281 KCNAB1Q14722 419 aa12.16□□□□□ -0.46
NCKIPSD-203ENST00000415281 ZNF658BQ4V348 819 aaPredicted RBP12.16□□□□□ -0.46
NCKIPSD-203ENST00000415281 CACHD1Q5VU97 1274 aa12.16□□□□□ -0.46
NCKIPSD-203ENST00000415281 PWWP2BQ6NUJ5 590 aa12.16□□□□□ -0.46
NCKIPSD-203ENST00000415281 DUS1LQ6P1R4 473 aaKnown RBP12.16□□□□□ -0.46
NCKIPSD-203ENST00000415281 C6orf15Q6UXA7 325 aaPredicted RBP12.16□□□□□ -0.46
NCKIPSD-203ENST00000415281 ZNF662Q6ZS27 426 aa12.16□□□□□ -0.46
NCKIPSD-203ENST00000415281 BBS12Q6ZW61 710 aa12.16□□□□□ -0.46
NCKIPSD-203ENST00000415281 BZW1Q7L1Q6 419 aaKnown RBP12.16□□□□□ -0.46
NCKIPSD-203ENST00000415281 SLC38A9Q8NBW4 561 aa12.16□□□□□ -0.46
NCKIPSD-203ENST00000415281 SPDYE1Q8NFV5 336 aaPredicted RBP12.16□□□□□ -0.46
NCKIPSD-203ENST00000415281 PPM1MQ96MI6 270 aa12.16□□□□□ -0.46
NCKIPSD-203ENST00000415281 CATSPER2Q96P56 530 aa12.16□□□□□ -0.46
NCKIPSD-203ENST00000415281 OSBPL8Q9BZF1 889 aa12.16□□□□□ -0.46
NCKIPSD-203ENST00000415281 TRIT1Q9H3H1 467 aaKnown RBP12.16□□□□□ -0.46
NCKIPSD-203ENST00000415281 TRABDQ9H4I3 376 aa12.16□□□□□ -0.46
NCKIPSD-203ENST00000415281 ARL5AQ9Y689 179 aa12.16□□□□□ -0.46
NCKIPSD-203ENST00000415281 MED13Q9UHV7 2174 aa12.16□□□□□ -0.46
NCKIPSD-203ENST00000415281 GLYATL1P3A0A0U1RQE8 302 aa12.15□□□□□ -0.46
NCKIPSD-203ENST00000415281 OR2AG2A6NM03 316 aa12.15□□□□□ -0.46
NCKIPSD-203ENST00000415281 KCNJ13O60928 360 aa12.15□□□□□ -0.46
NCKIPSD-203ENST00000415281 SPTBP11277 2137 aa12.15□□□□□ -0.46
NCKIPSD-203ENST00000415281 AMD1P17707 334 aa12.15□□□□□ -0.46
NCKIPSD-203ENST00000415281 TCN2P20062 427 aa12.15□□□□□ -0.46
NCKIPSD-203ENST00000415281 DLSTP36957 453 aa12.15□□□□□ -0.46
NCKIPSD-203ENST00000415281 PPM1FP49593 454 aaPredicted RBP12.15□□□□□ -0.46
NCKIPSD-203ENST00000415281 FOXK1P85037 733 aa12.15□□□□□ -0.46
NCKIPSD-203ENST00000415281 PPP2R5EQ16537 467 aa12.15□□□□□ -0.46
NCKIPSD-203ENST00000415281 C16orf46Q6P387 395 aa12.15□□□□□ -0.46
NCKIPSD-203ENST00000415281 FAM199XQ6PEV8 388 aaPredicted RBP12.15□□□□□ -0.46
NCKIPSD-203ENST00000415281 FBXO38Q6PIJ6 1188 aa12.15□□□□□ -0.46
NCKIPSD-203ENST00000415281 AMZ2Q86W34 360 aa12.15□□□□□ -0.46
NCKIPSD-203ENST00000415281 TRAPPC5Q8IUR0 188 aa12.15□□□□□ -0.46
NCKIPSD-203ENST00000415281 KLHDC8BQ8IXV7 354 aa12.15□□□□□ -0.46
NCKIPSD-203ENST00000415281 ESX1Q8N693 406 aa12.15□□□□□ -0.46
NCKIPSD-203ENST00000415281 AVL9Q8NBF6 648 aa12.15□□□□□ -0.46
NCKIPSD-203ENST00000415281 IPMKQ8NFU5 416 aa12.15□□□□□ -0.46
NCKIPSD-203ENST00000415281 ZNF398Q8TD17 642 aa12.15□□□□□ -0.46
NCKIPSD-203ENST00000415281 BRSK1Q8TDC3 778 aa12.15□□□□□ -0.46
NCKIPSD-203ENST00000415281 BLOC1S5Q8TDH9 187 aa12.15□□□□□ -0.46
NCKIPSD-203ENST00000415281 HES6Q96HZ4 224 aa12.15□□□□□ -0.46
NCKIPSD-203ENST00000415281 ALS2CR12Q96Q35 445 aa12.15□□□□□ -0.46
NCKIPSD-203ENST00000415281 SRPK1Q96SB4 655 aaKnown RBP12.15□□□□□ -0.46
NCKIPSD-203ENST00000415281 MAP3K3Q99759 626 aa12.15□□□□□ -0.46
NCKIPSD-203ENST00000415281 FAM118BQ9BPY3 351 aa12.15□□□□□ -0.46
NCKIPSD-203ENST00000415281 ULBP3Q9BZM4 244 aa12.15□□□□□ -0.46
NCKIPSD-203ENST00000415281 ZMYND15Q9H091 742 aa12.15□□□□□ -0.46
NCKIPSD-203ENST00000415281 SMOXQ9NWM0 555 aa12.15□□□□□ -0.46
NCKIPSD-203ENST00000415281 TRMT1Q9NXH9 659 aaKnown RBP12.15□□□□□ -0.46
NCKIPSD-203ENST00000415281 PCDHGA6Q9Y5G7 932 aa12.15□□□□□ -0.46
NCKIPSD-203ENST00000415281 CFAP20Q9Y6A4 193 aaKnown RBP12.15□□□□□ -0.46
NCKIPSD-203ENST00000415281 DNMT3AQ9Y6K1 912 aaPredicted RBP12.15□□□□□ -0.46
NCKIPSD-203ENST00000415281 TJP3O95049 919 aa12.14□□□□□ -0.47
NCKIPSD-203ENST00000415281 EBLN1P0CF75 366 aa12.14□□□□□ -0.47
NCKIPSD-203ENST00000415281 HLA-DPA1P20036 260 aa12.14□□□□□ -0.47
NCKIPSD-203ENST00000415281 CDKN1CP49918 316 aaPredicted RBP12.14□□□□□ -0.47
NCKIPSD-203ENST00000415281 MPP3Q13368 585 aa12.14□□□□□ -0.47
NCKIPSD-203ENST00000415281 ERV3-1Q14264 604 aa12.14□□□□□ -0.47
NCKIPSD-203ENST00000415281 RPS6KA1Q15418 735 aa12.14□□□□□ -0.47
NCKIPSD-203ENST00000415281 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.14□□□□□ -0.47
NCKIPSD-203ENST00000415281 MEI1Q5TIA1 1274 aa12.14□□□□□ -0.47
NCKIPSD-203ENST00000415281 CAPRIN2Q6IMN6 1127 aaKnown RBP12.14□□□□□ -0.47
NCKIPSD-203ENST00000415281 LCN10Q6JVE6 187 aa12.14□□□□□ -0.47
NCKIPSD-203ENST00000415281 GLT6D1Q7Z4J2 308 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms