RNA–Protein interactions for RNA: ENST00000414317.6

SNCAIP-206, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 1,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-206ENST00000414317 CALCOCO2Q13137 446 aa13.21□□□□□ -0.29
SNCAIP-206ENST00000414317 NR1D2Q14995 579 aa13.21□□□□□ -0.29
SNCAIP-206ENST00000414317 HIF1AQ16665 826 aa13.21□□□□□ -0.29
SNCAIP-206ENST00000414317 BBS9Q3SYG4 887 aa13.21□□□□□ -0.29
SNCAIP-206ENST00000414317 MSS51Q4VC12 460 aa13.21□□□□□ -0.29
SNCAIP-206ENST00000414317 CCNI2Q6ZMN8 369 aaPredicted RBP13.21□□□□□ -0.29
SNCAIP-206ENST00000414317 RBM44Q6ZP01 1051 aaKnown RBP13.21□□□□□ -0.29
SNCAIP-206ENST00000414317 COL27A1Q8IZC6 1860 aaPredicted RBP13.21□□□□□ -0.29
SNCAIP-206ENST00000414317 DCBLD1Q8N8Z6 715 aa13.21□□□□□ -0.29
SNCAIP-206ENST00000414317 MNS1Q8NEH6 495 aa13.21□□□□□ -0.29
SNCAIP-206ENST00000414317 GPR150Q8NGU9 434 aa13.21□□□□□ -0.29
SNCAIP-206ENST00000414317 DEPDC7Q96QD5 511 aa13.21□□□□□ -0.29
SNCAIP-206ENST00000414317 SLC38A3Q99624 504 aa13.21□□□□□ -0.29
SNCAIP-206ENST00000414317 EBNA1BP2Q99848 306 aaKnown RBP13.21□□□□□ -0.29
SNCAIP-206ENST00000414317 NAT9Q9BTE0 207 aa13.21□□□□□ -0.29
SNCAIP-206ENST00000414317 RAB17Q9H0T7 212 aa13.21□□□□□ -0.29
SNCAIP-206ENST00000414317 DPH5Q9H2P9 285 aa13.21□□□□□ -0.29
SNCAIP-206ENST00000414317 WHRNQ9P202 907 aa13.21□□□□□ -0.29
SNCAIP-206ENST00000414317 ZNF624Q9P2J8 865 aaPredicted RBP13.21□□□□□ -0.29
SNCAIP-206ENST00000414317 PSMD13Q9UNM6 376 aa13.21□□□□□ -0.29
SNCAIP-206ENST00000414317 WDR37Q9Y2I8 494 aa13.21□□□□□ -0.29
SNCAIP-206ENST00000414317 AKAP13Q12802 2813 aa13.21□□□□□ -0.3
SNCAIP-206ENST00000414317 A0A1W2PQM1 296 aa13.2□□□□□ -0.3
SNCAIP-206ENST00000414317 PRMT5O14744 637 aaPredicted RBP13.2□□□□□ -0.3
SNCAIP-206ENST00000414317 PFDN6O15212 129 aa13.2□□□□□ -0.3
SNCAIP-206ENST00000414317 CASC3O15234 703 aaKnown RBP13.2□□□□□ -0.3
SNCAIP-206ENST00000414317 TP73O15350 636 aa13.2□□□□□ -0.3
SNCAIP-206ENST00000414317 B4GAT1O43505 415 aa13.2□□□□□ -0.3
SNCAIP-206ENST00000414317 BANF1O75531 89 aa13.2□□□□□ -0.3
SNCAIP-206ENST00000414317 VIPP01282 170 aa13.2□□□□□ -0.3
SNCAIP-206ENST00000414317 SLC19A1P41440 591 aa13.2□□□□□ -0.3
SNCAIP-206ENST00000414317 OR1D5P58170 312 aa13.2□□□□□ -0.3
SNCAIP-206ENST00000414317 UBE2IP63279 158 aaKnown RBP13.2□□□□□ -0.3
SNCAIP-206ENST00000414317 TARDBPQ13148 414 aaKnown RBP eCLIP13.2□□□□□ -0.3
SNCAIP-206ENST00000414317 THOC5Q13769 683 aaKnown RBP13.2□□□□□ -0.3
SNCAIP-206ENST00000414317 CLCA4Q14CN2 919 aa13.2□□□□□ -0.3
SNCAIP-206ENST00000414317 LONRF1Q17RB8 773 aa13.2□□□□□ -0.3
SNCAIP-206ENST00000414317 DUPD1Q68J44 220 aa13.2□□□□□ -0.3
SNCAIP-206ENST00000414317 NEPROQ6NW34 567 aa13.2□□□□□ -0.3
SNCAIP-206ENST00000414317 C8orf74Q6P047 294 aa13.2□□□□□ -0.3
SNCAIP-206ENST00000414317 MARCH9Q86YJ5 346 aa13.2□□□□□ -0.3
SNCAIP-206ENST00000414317 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.2□□□□□ -0.3
SNCAIP-206ENST00000414317 LRRC39Q96DD0 335 aa13.2□□□□□ -0.3
SNCAIP-206ENST00000414317 CXorf40BQ96DE9 158 aa13.2□□□□□ -0.3
SNCAIP-206ENST00000414317 PWWP2AQ96N64 755 aa13.2□□□□□ -0.3
SNCAIP-206ENST00000414317 GFM1Q96RP9 751 aaKnown RBP13.2□□□□□ -0.3
SNCAIP-206ENST00000414317 TCF12Q99081 682 aa13.2□□□□□ -0.3
SNCAIP-206ENST00000414317 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.2□□□□□ -0.3
SNCAIP-206ENST00000414317 COG4Q9H9E3 785 aa13.2□□□□□ -0.3
SNCAIP-206ENST00000414317 IL1RAPL1Q9NZN1 696 aa13.2□□□□□ -0.3
SNCAIP-206ENST00000414317 FAM169AQ9Y6X4 670 aa13.2□□□□□ -0.3
SNCAIP-206ENST00000414317 CHD8Q9HCK8 2581 aa13.2□□□□□ -0.3
SNCAIP-206ENST00000414317 KIF26BQ2KJY2 2108 aa13.2□□□□□ -0.3
SNCAIP-206ENST00000414317 OR52A4PA6NMU1 304 aa13.2□□□□□ -0.3
SNCAIP-206ENST00000414317 TTC4O95801 387 aa13.2□□□□□ -0.3
SNCAIP-206ENST00000414317 SLC35G4P0C7Q5 338 aa13.2□□□□□ -0.3
SNCAIP-206ENST00000414317 OGNP20774 298 aaKnown RBP13.2□□□□□ -0.3
SNCAIP-206ENST00000414317 CRYMQ14894 314 aa13.2□□□□□ -0.3
SNCAIP-206ENST00000414317 TYSND1Q2T9J0 566 aa13.2□□□□□ -0.3
SNCAIP-206ENST00000414317 AMZ1Q400G9 498 aa13.2□□□□□ -0.3
SNCAIP-206ENST00000414317 RNF187Q5TA31 235 aaPredicted RBP13.2□□□□□ -0.3
SNCAIP-206ENST00000414317 ZNF449Q6P9G9 518 aa13.2□□□□□ -0.3
SNCAIP-206ENST00000414317 ZNF761Q86XN6 746 aaPredicted RBP13.2□□□□□ -0.3
SNCAIP-206ENST00000414317 LILRA3Q8N6C8 439 aaPredicted RBP13.2□□□□□ -0.3
SNCAIP-206ENST00000414317 ELMO1Q92556 727 aa13.2□□□□□ -0.3
SNCAIP-206ENST00000414317 TSSK1BQ9BXA7 367 aa13.2□□□□□ -0.3
SNCAIP-206ENST00000414317 WWP1Q9H0M0 922 aa13.2□□□□□ -0.3
SNCAIP-206ENST00000414317 C20orf96Q9NUD7 363 aaPredicted RBP13.2□□□□□ -0.3
SNCAIP-206ENST00000414317 POT1Q9NUX5 634 aa13.2□□□□□ -0.3
SNCAIP-206ENST00000414317 KCNK4Q9NYG8 393 aa13.2□□□□□ -0.3
SNCAIP-206ENST00000414317 TPRP12270 2363 aaKnown RBP13.19□□□□□ -0.3
SNCAIP-206ENST00000414317 IGHV1OR21-1A0A087WYE8 117 aa13.19□□□□□ -0.3
SNCAIP-206ENST00000414317 UBA6A0AVT1 1052 aaPredicted RBP13.19□□□□□ -0.3
SNCAIP-206ENST00000414317 CTAGE15A4D2H0 777 aa13.19□□□□□ -0.3
SNCAIP-206ENST00000414317 D6RAR5 112 aa13.19□□□□□ -0.3
SNCAIP-206ENST00000414317 CSO75390 466 aaKnown RBP13.19□□□□□ -0.3
SNCAIP-206ENST00000414317 CPNE6O95741 557 aa13.19□□□□□ -0.3
SNCAIP-206ENST00000414317 CTAGE8P0CG41 777 aa13.19□□□□□ -0.3
SNCAIP-206ENST00000414317 ELK3P41970 407 aa13.19□□□□□ -0.3
SNCAIP-206ENST00000414317 PPM1FP49593 454 aaPredicted RBP13.19□□□□□ -0.3
SNCAIP-206ENST00000414317 GPLD1P80108 840 aa13.19□□□□□ -0.3
SNCAIP-206ENST00000414317 RPA4Q13156 261 aa13.19□□□□□ -0.3
SNCAIP-206ENST00000414317 RPE65Q16518 533 aa13.19□□□□□ -0.3
SNCAIP-206ENST00000414317 ISXQ2M1V0 245 aa13.19□□□□□ -0.3
SNCAIP-206ENST00000414317 ZNF658BQ4V348 819 aaPredicted RBP13.19□□□□□ -0.3
SNCAIP-206ENST00000414317 SPANXN3Q5MJ09 141 aa13.19□□□□□ -0.3
SNCAIP-206ENST00000414317 HP1BP3Q5SSJ5 553 aaPredicted RBP13.19□□□□□ -0.3
SNCAIP-206ENST00000414317 ZNF470Q6ECI4 717 aa13.19□□□□□ -0.3
SNCAIP-206ENST00000414317 XKR5Q6UX68 686 aa13.19□□□□□ -0.3
SNCAIP-206ENST00000414317 CTAGE6Q86UF2 777 aa13.19□□□□□ -0.3
SNCAIP-206ENST00000414317 LRRC6Q86X45 466 aa13.19□□□□□ -0.3
SNCAIP-206ENST00000414317 CILP2Q8IUL8 1156 aa13.19□□□□□ -0.3
SNCAIP-206ENST00000414317 IGDCC3Q8IVU1 814 aa13.19□□□□□ -0.3
SNCAIP-206ENST00000414317 CTAGE4Q8IX94 777 aa13.19□□□□□ -0.3
SNCAIP-206ENST00000414317 RBM12BQ8IXT5 1001 aaKnown RBP13.19□□□□□ -0.3
SNCAIP-206ENST00000414317 LMNTD2Q8IXW0 634 aa13.19□□□□□ -0.3
SNCAIP-206ENST00000414317 OR10G6Q8NH81 332 aa13.19□□□□□ -0.3
SNCAIP-206ENST00000414317 CALML6Q8TD86 181 aa13.19□□□□□ -0.3
SNCAIP-206ENST00000414317 AHCYL2Q96HN2 611 aaKnown RBP13.19□□□□□ -0.3
SNCAIP-206ENST00000414317 C12orf66Q96MD2 445 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms