RNA–Protein interactions for RNA: ENST00000413002.5

SSB-203, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 674 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-203ENST00000413002 ZNF514Q96K75 400 aaPredicted RBP12.88□□□□□ -0.35
SSB-203ENST00000413002 SLC46A1Q96NT5 459 aa12.88□□□□□ -0.35
SSB-203ENST00000413002 INSM2Q96T92 566 aaPredicted RBP12.88□□□□□ -0.35
SSB-203ENST00000413002 NAPGQ99747 312 aaPredicted RBP12.88□□□□□ -0.35
SSB-203ENST00000413002 C19orf43Q9BQ61 176 aa12.88□□□□□ -0.35
SSB-203ENST00000413002 STRADBQ9C0K7 418 aa12.88□□□□□ -0.35
SSB-203ENST00000413002 SLC40A1Q9NP59 571 aa12.88□□□□□ -0.35
SSB-203ENST00000413002 IMP3Q9NV31 184 aaKnown RBP12.88□□□□□ -0.35
SSB-203ENST00000413002 BFARQ9NZS9 450 aa12.88□□□□□ -0.35
SSB-203ENST00000413002 MARCH4Q9P2E8 410 aaPredicted RBP12.88□□□□□ -0.35
SSB-203ENST00000413002 DNMT3AQ9Y6K1 912 aaPredicted RBP12.88□□□□□ -0.35
SSB-203ENST00000413002 PKD1L2Q7Z442 2459 aa12.88□□□□□ -0.35
SSB-203ENST00000413002 ZFC3H1O60293 1989 aaKnown RBP12.87□□□□□ -0.35
SSB-203ENST00000413002 CACNA1BQ00975 2339 aa12.87□□□□□ -0.35
SSB-203ENST00000413002 ACACAQ13085 2346 aa12.87□□□□□ -0.35
SSB-203ENST00000413002 GOLGA6L10A0A0M3HER8 536 aa12.87□□□□□ -0.35
SSB-203ENST00000413002 GOLGA8KD6RF30 607 aa12.87□□□□□ -0.35
SSB-203ENST00000413002 GOLGA8TH3BQL2 631 aa12.87□□□□□ -0.35
SSB-203ENST00000413002 CES2O00748 559 aa12.87□□□□□ -0.35
SSB-203ENST00000413002 ZW10O43264 779 aa12.87□□□□□ -0.35
SSB-203ENST00000413002 DUX1O43812 170 aa12.87□□□□□ -0.35
SSB-203ENST00000413002 CCL4P13236 92 aa12.87□□□□□ -0.35
SSB-203ENST00000413002 ITGB6P18564 788 aa12.87□□□□□ -0.35
SSB-203ENST00000413002 ITPKBP27987 946 aa12.87□□□□□ -0.35
SSB-203ENST00000413002 PDHA2P29803 388 aa12.87□□□□□ -0.35
SSB-203ENST00000413002 EIF2S3P41091 472 aaKnown RBP12.87□□□□□ -0.35
SSB-203ENST00000413002 HALP42357 657 aa12.87□□□□□ -0.35
SSB-203ENST00000413002 PREPP48147 710 aa12.87□□□□□ -0.35
SSB-203ENST00000413002 NPY2RP49146 381 aa12.87□□□□□ -0.35
SSB-203ENST00000413002 PRLHRP49683 370 aa12.87□□□□□ -0.35
SSB-203ENST00000413002 LIMK2P53671 638 aa12.87□□□□□ -0.35
SSB-203ENST00000413002 MAPK10P53779 464 aa12.87□□□□□ -0.35
SSB-203ENST00000413002 PRAMEP78395 509 aa12.87□□□□□ -0.35
SSB-203ENST00000413002 ACVR1Q04771 509 aa12.87□□□□□ -0.35
SSB-203ENST00000413002 BRD3Q15059 726 aa12.87□□□□□ -0.35
SSB-203ENST00000413002 KIF26BQ2KJY2 2108 aa12.87□□□□□ -0.35
SSB-203ENST00000413002 PAPD7Q5XG87 772 aaKnown RBP12.87□□□□□ -0.35
SSB-203ENST00000413002 LRRC8BQ6P9F7 803 aa12.87□□□□□ -0.35
SSB-203ENST00000413002 AFTPHQ6ULP2 937 aa12.87□□□□□ -0.35
SSB-203ENST00000413002 WASH2PQ6VEQ5 465 aa12.87□□□□□ -0.35
SSB-203ENST00000413002 CAND1Q86VP6 1230 aaKnown RBP12.87□□□□□ -0.35
SSB-203ENST00000413002 JAMLQ86YT9 394 aa12.87□□□□□ -0.35
SSB-203ENST00000413002 CREG2Q8IUH2 290 aa12.87□□□□□ -0.35
SSB-203ENST00000413002 KLHL7Q8IXQ5 586 aa12.87□□□□□ -0.35
SSB-203ENST00000413002 OR4L1Q8NH43 312 aa12.87□□□□□ -0.35
SSB-203ENST00000413002 FGF11Q92914 225 aa12.87□□□□□ -0.35
SSB-203ENST00000413002 SH3KBP1Q96B97 665 aa12.87□□□□□ -0.35
SSB-203ENST00000413002 GRAMD1AQ96CP6 724 aa12.87□□□□□ -0.35
SSB-203ENST00000413002 MFSD3Q96ES6 412 aa12.87□□□□□ -0.35
SSB-203ENST00000413002 CRELD1Q96HD1 420 aa12.87□□□□□ -0.35
SSB-203ENST00000413002 C12orf66Q96MD2 445 aa12.87□□□□□ -0.35
SSB-203ENST00000413002 NRTNQ99748 197 aa12.87□□□□□ -0.35
SSB-203ENST00000413002 WASH6PQ9NQA3 447 aa12.87□□□□□ -0.35
SSB-203ENST00000413002 OGFRQ9NZT2 677 aa12.87□□□□□ -0.35
SSB-203ENST00000413002 RALYQ9UKM9 306 aaKnown RBP12.87□□□□□ -0.35
SSB-203ENST00000413002 SAR1BQ9Y6B6 198 aa12.87□□□□□ -0.35
SSB-203ENST00000413002 ZNF106Q9H2Y7 1883 aaKnown RBP12.87□□□□□ -0.35
SSB-203ENST00000413002 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.86□□□□□ -0.35
SSB-203ENST00000413002 CTAGE9A4FU28 777 aa12.86□□□□□ -0.35
SSB-203ENST00000413002 TMX2-CTNND1H3BSU7 103 aa12.86□□□□□ -0.35
SSB-203ENST00000413002 KCNJ13O60928 360 aa12.86□□□□□ -0.35
SSB-203ENST00000413002 JMJD7P0C870 316 aa12.86□□□□□ -0.35
SSB-203ENST00000413002 THRAP10827 490 aa12.86□□□□□ -0.35
SSB-203ENST00000413002 AMD1P17707 334 aa12.86□□□□□ -0.35
SSB-203ENST00000413002 FNTAP49354 379 aa12.86□□□□□ -0.35
SSB-203ENST00000413002 GFERP55789 205 aa12.86□□□□□ -0.35
SSB-203ENST00000413002 GPLD1P80108 840 aa12.86□□□□□ -0.35
SSB-203ENST00000413002 LAMB3Q13751 1172 aa12.86□□□□□ -0.35
SSB-203ENST00000413002 PPP1R7Q15435 360 aa12.86□□□□□ -0.35
SSB-203ENST00000413002 FASTKD1Q53R41 847 aaKnown RBP12.86□□□□□ -0.35
SSB-203ENST00000413002 TMEM71Q6P5X7 295 aa12.86□□□□□ -0.35
SSB-203ENST00000413002 NLRP9Q7RTR0 991 aa12.86□□□□□ -0.35
SSB-203ENST00000413002 LSMEM2Q8N112 164 aa12.86□□□□□ -0.35
SSB-203ENST00000413002 OR4D9Q8NGE8 314 aa12.86□□□□□ -0.35
SSB-203ENST00000413002 HEXDCQ8WVB3 486 aa12.86□□□□□ -0.35
SSB-203ENST00000413002 RSC1A1Q92681 617 aa12.86□□□□□ -0.35
SSB-203ENST00000413002 PMEPA1Q969W9 287 aa12.86□□□□□ -0.35
SSB-203ENST00000413002 LINC00615Q96LM1 132 aaPredicted RBP12.86□□□□□ -0.35
SSB-203ENST00000413002 RMDN2Q96LZ7 410 aa12.86□□□□□ -0.35
SSB-203ENST00000413002 CCM2Q9BSQ5 444 aa12.86□□□□□ -0.35
SSB-203ENST00000413002 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.86□□□□□ -0.35
SSB-203ENST00000413002 IL22Q9GZX6 179 aa12.86□□□□□ -0.35
SSB-203ENST00000413002 TREX1Q9NSU2 369 aa12.86□□□□□ -0.35
SSB-203ENST00000413002 POT1Q9NUX5 634 aa12.86□□□□□ -0.35
SSB-203ENST00000413002 WDR70Q9NW82 654 aa12.86□□□□□ -0.35
SSB-203ENST00000413002 IL1RAPL1Q9NZN1 696 aa12.86□□□□□ -0.35
SSB-203ENST00000413002 RIMKLBQ9ULI2 386 aa12.86□□□□□ -0.35
SSB-203ENST00000413002 PCDHGA8Q9Y5G5 932 aa12.86□□□□□ -0.35
SSB-203ENST00000413002 URB1O60287 2271 aaKnown RBP12.86□□□□□ -0.35
SSB-203ENST00000413002 ITPR1Q14643 2758 aa12.86□□□□□ -0.35
SSB-203ENST00000413002 LILRA5A6NI73 299 aa12.85□□□□□ -0.35
SSB-203ENST00000413002 IQCF5A8MTL0 148 aa12.85□□□□□ -0.35
SSB-203ENST00000413002 DXOO77932 396 aaKnown RBP12.85□□□□□ -0.35
SSB-203ENST00000413002 UBXN7O94888 489 aa12.85□□□□□ -0.35
SSB-203ENST00000413002 VAPBO95292 243 aa12.85□□□□□ -0.35
SSB-203ENST00000413002 F7P08709 466 aaPredicted RBP12.85□□□□□ -0.35
SSB-203ENST00000413002 SLC35G4P0C7Q5 338 aa12.85□□□□□ -0.35
SSB-203ENST00000413002 MTHFD1P11586 935 aaKnown RBP12.85□□□□□ -0.35
SSB-203ENST00000413002 PTGIRP43119 386 aa12.85□□□□□ -0.35
SSB-203ENST00000413002 MAGEA6P43360 314 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms