RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 GLS2Q9UI32 602 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 DCTN4Q9UJW0 460 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 TLK1Q9UKI8 766 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 CNTNAP5Q8WYK1 1306 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 TEX13CA0A0J9YWL9 993 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 A0A1W2PRG0 241 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 ANKDD1BA6NHY2 528 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 SAGE2PA6NJ88 616 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 NEDD8-MDP1E9PL57 170 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 DNASE2O00115 360 aaPredicted RBP5.18□□□□□ -1.58
HERC4-205ENST00000412272 ARVCFO00192 962 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 NOP56O00567 594 aaKnown RBP5.18□□□□□ -1.58
HERC4-205ENST00000412272 TCAPO15273 167 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 SNNO75324 88 aaPredicted RBP5.18□□□□□ -1.58
HERC4-205ENST00000412272 AVILO75366 819 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 MED6O75586 246 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 IL18RAPO95256 599 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 PDE8BO95263 885 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 C22orf31O95567 290 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 IFNA4P05014 189 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 PCCAP05165 728 aaPredicted RBP5.18□□□□□ -1.58
HERC4-205ENST00000412272 THEGLP0DJG4 465 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 CBR1P16152 277 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 RAB4AP20338 218 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 SLC1A3P43003 542 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 CRKLP46109 303 aaKnown RBP5.18□□□□□ -1.58
HERC4-205ENST00000412272 PSMD8P48556 350 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 PPP5CP53041 499 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 GALCP54803 685 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 OR2B6P58173 313 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 HERVK_113P63132 956 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 TNK2Q07912 1038 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 ILF2Q12905 390 aaKnown RBP5.18□□□□□ -1.58
HERC4-205ENST00000412272 PTP4A2Q12974 167 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 DSG2Q14126 1118 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 TIGD6Q17RP2 521 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 TEX44Q53QW1 395 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 FBXO46Q6PJ61 603 aaPredicted RBP5.18□□□□□ -1.58
HERC4-205ENST00000412272 VITQ6UXI7 678 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 OTOP1Q7RTM1 612 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 CCDC103Q8IW40 242 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 MCOLN2Q8IZK6 566 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 ZNF654Q8IZM8 581 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 OR6M1Q8NGM8 313 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 TOP1MTQ969P6 601 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 C14orf144Q96I85 54 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 DUSP15Q9H1R2 295 aaPredicted RBP5.18□□□□□ -1.58
HERC4-205ENST00000412272 RGS17Q9UGC6 210 aaPredicted RBP5.18□□□□□ -1.58
HERC4-205ENST00000412272 NDUFB9Q9Y6M9 179 aa5.18□□□□□ -1.58
HERC4-205ENST00000412272 PRR36Q9H6K5 1346 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 KHNYNO15037 678 aaKnown RBP5.17□□□□□ -1.58
HERC4-205ENST00000412272 SIGLEC6O43699 453 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 UGDHO60701 494 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 SEC14L2O76054 403 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 JUNP05412 331 aaKnown RBP5.17□□□□□ -1.58
HERC4-205ENST00000412272 UCHL3P15374 230 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 EPHA3P29320 983 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 BMI1P35226 326 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 CD79BP40259 229 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 BNC1Q01954 994 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 SOX4Q06945 474 aaPredicted RBP5.17□□□□□ -1.58
HERC4-205ENST00000412272 DMP1Q13316 513 aaPredicted RBP5.17□□□□□ -1.58
HERC4-205ENST00000412272 ODF1Q14990 250 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 OCLNQ16625 522 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 OR2B11Q5JQS5 317 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 SEL1L2Q5TEA6 688 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 SLC27A4Q6P1M0 643 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 XKRXQ6PP77 449 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 MCPH1Q8NEM0 835 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 OR5T2Q8NGG2 359 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 ZNF671Q8TAW3 534 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 LINC00052Q96N35 136 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 FYTTD1Q96QD9 318 aaKnown RBP5.17□□□□□ -1.58
HERC4-205ENST00000412272 KCNK16Q96T55 309 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 AGAP2Q99490 1192 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 SPNS1Q9H2V7 528 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 C12orf49Q9H741 205 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 TLR9Q9NR96 1032 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 TMOD3Q9NYL9 352 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 H2AFY2Q9P0M6 372 aaPredicted RBP5.17□□□□□ -1.58
HERC4-205ENST00000412272 SERPINB13Q9UIV8 391 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 ELF5Q9UKW6 265 aaPredicted RBP5.17□□□□□ -1.58
HERC4-205ENST00000412272 CRYL1Q9Y2S2 319 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 ATRNL1Q5VV63 1379 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 DOT1LQ8TEK3 1739 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 A0A0U1RQV5 110 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 RPS10-NUDT3A0A1W2PQS6 291 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 KRT87PA6NCN2 255 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 PPEF2O14830 753 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 B4GAT1O43505 415 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 TGM6O95932 706 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 FCER1AP12319 257 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 EEF1DP29692 281 aaKnown RBP5.17□□□□□ -1.58
HERC4-205ENST00000412272 ERP29P30040 261 aaKnown RBP5.17□□□□□ -1.58
HERC4-205ENST00000412272 ALDH9A1P49189 494 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 MAPK10P53779 464 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 MAT1AQ00266 395 aaKnown RBP5.17□□□□□ -1.58
HERC4-205ENST00000412272 IKBKEQ14164 716 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 ZNF528Q3MIS6 628 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 CATSPEREQ5SY80 951 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms