RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 ZBTB11O95625 1053 aaPredicted RBP16.32■□□□□ 0.2
MRPL55-220ENST00000411464 MTHFD1P11586 935 aaKnown RBP16.32■□□□□ 0.2
MRPL55-220ENST00000411464 LPOP22079 712 aaPredicted RBP16.32■□□□□ 0.2
MRPL55-220ENST00000411464 SPAM1P38567 509 aa16.32■□□□□ 0.2
MRPL55-220ENST00000411464 PBX1P40424 430 aa16.32■□□□□ 0.2
MRPL55-220ENST00000411464 CTSCP53634 463 aa16.32■□□□□ 0.2
MRPL55-220ENST00000411464 GSDMDP57764 484 aa16.32■□□□□ 0.2
MRPL55-220ENST00000411464 GPS2Q13227 327 aa16.32■□□□□ 0.2
MRPL55-220ENST00000411464 NFE2L1Q14494 772 aa16.32■□□□□ 0.2
MRPL55-220ENST00000411464 INPP5JQ15735 1006 aaPredicted RBP16.32■□□□□ 0.2
MRPL55-220ENST00000411464 GPR19Q15760 415 aa16.32■□□□□ 0.2
MRPL55-220ENST00000411464 IZUMO3Q5VZ72 239 aa16.32■□□□□ 0.2
MRPL55-220ENST00000411464 PAPD7Q5XG87 772 aaKnown RBP16.32■□□□□ 0.2
MRPL55-220ENST00000411464 METRNLQ641Q3 311 aa16.32■□□□□ 0.2
MRPL55-220ENST00000411464 FAM151BQ6UXP7 276 aa16.32■□□□□ 0.2
MRPL55-220ENST00000411464 FAM83HQ6ZRV2 1179 aaPredicted RBP16.32■□□□□ 0.2
MRPL55-220ENST00000411464 ZFPM2Q8WW38 1151 aa16.32■□□□□ 0.2
MRPL55-220ENST00000411464 TEKT5Q96M29 485 aa16.32■□□□□ 0.2
MRPL55-220ENST00000411464 PACSIN1Q9BY11 444 aa16.32■□□□□ 0.2
MRPL55-220ENST00000411464 CHST8Q9H2A9 424 aa16.32■□□□□ 0.2
MRPL55-220ENST00000411464 SLAMF7Q9NQ25 335 aa16.32■□□□□ 0.2
MRPL55-220ENST00000411464 FAM153AQ9UHL3 310 aa16.32■□□□□ 0.2
MRPL55-220ENST00000411464 NENFQ9UMX5 172 aa16.32■□□□□ 0.2
MRPL55-220ENST00000411464 PKP3Q9Y446 797 aa16.32■□□□□ 0.2
MRPL55-220ENST00000411464 PCDHGB7Q9Y5F8 929 aa16.32■□□□□ 0.2
MRPL55-220ENST00000411464 CFAP20Q9Y6A4 193 aaKnown RBP16.32■□□□□ 0.2
MRPL55-220ENST00000411464 GLYATL1P3A0A0U1RQE8 302 aa16.31■□□□□ 0.2
MRPL55-220ENST00000411464 LOC285095A0A1B0GVY8 99 aa16.31■□□□□ 0.2
MRPL55-220ENST00000411464 OR6C74A6NCV1 312 aa16.31■□□□□ 0.2
MRPL55-220ENST00000411464 SEMA7AO75326 666 aa16.31■□□□□ 0.2
MRPL55-220ENST00000411464 SORBS2O94875 1100 aaKnown RBP16.31■□□□□ 0.2
MRPL55-220ENST00000411464 PBLDP30039 288 aaPredicted RBP16.31■□□□□ 0.2
MRPL55-220ENST00000411464 PTGIRP43119 386 aa16.31■□□□□ 0.2
MRPL55-220ENST00000411464 WNT3AP56704 352 aa16.31■□□□□ 0.2
MRPL55-220ENST00000411464 DYNLT1P63172 113 aa16.31■□□□□ 0.2
MRPL55-220ENST00000411464 LAMB3Q13751 1172 aa16.31■□□□□ 0.2
MRPL55-220ENST00000411464 ITGA9Q13797 1035 aa16.31■□□□□ 0.2
MRPL55-220ENST00000411464 LONRF2Q1L5Z9 754 aa16.31■□□□□ 0.2
MRPL55-220ENST00000411464 FNBP1LQ5T0N5 605 aa16.31■□□□□ 0.2
MRPL55-220ENST00000411464 BZW1Q7L1Q6 419 aaKnown RBP16.31■□□□□ 0.2
MRPL55-220ENST00000411464 CARFQ8N187 725 aa16.31■□□□□ 0.2
MRPL55-220ENST00000411464 SLC25A41Q8N5S1 370 aa16.31■□□□□ 0.2
MRPL55-220ENST00000411464 DDHD1Q8NEL9 900 aa16.31■□□□□ 0.2
MRPL55-220ENST00000411464 ZNF501Q96CX3 271 aaPredicted RBP16.31■□□□□ 0.2
MRPL55-220ENST00000411464 SOHLH2Q9NX45 425 aa16.31■□□□□ 0.2
MRPL55-220ENST00000411464 HACD3Q9P035 362 aa16.31■□□□□ 0.2
MRPL55-220ENST00000411464 IL17CQ9P0M4 197 aa16.31■□□□□ 0.2
MRPL55-220ENST00000411464 MAP10Q9P2G4 905 aa16.31■□□□□ 0.2
MRPL55-220ENST00000411464 SNX7Q9UNH6 387 aa16.31■□□□□ 0.2
MRPL55-220ENST00000411464 MEN1O00255 615 aa16.3■□□□□ 0.2
MRPL55-220ENST00000411464 DPM1O60762 260 aa16.3■□□□□ 0.2
MRPL55-220ENST00000411464 EPOP01588 193 aa16.3■□□□□ 0.2
MRPL55-220ENST00000411464 KRT1P04264 644 aa16.3■□□□□ 0.2
MRPL55-220ENST00000411464 GYPCP04921 128 aa16.3■□□□□ 0.2
MRPL55-220ENST00000411464 RAB40ALP0C0E4 278 aa16.3■□□□□ 0.2
MRPL55-220ENST00000411464 MSH3P20585 1137 aa16.3■□□□□ 0.2
MRPL55-220ENST00000411464 PTPN3P26045 913 aa16.3■□□□□ 0.2
MRPL55-220ENST00000411464 VARSP26640 1264 aaKnown RBP16.3■□□□□ 0.2
MRPL55-220ENST00000411464 AKT1P31749 480 aa16.3■□□□□ 0.2
MRPL55-220ENST00000411464 NOMO1Q15155 1222 aa16.3■□□□□ 0.2
MRPL55-220ENST00000411464 SLC18A3Q16572 532 aa16.3■□□□□ 0.2
MRPL55-220ENST00000411464 SIRPB2Q5JXA9 342 aa16.3■□□□□ 0.2
MRPL55-220ENST00000411464 GPRC6AQ5T6X5 926 aa16.3■□□□□ 0.2
MRPL55-220ENST00000411464 JMJD6Q6NYC1 403 aaPredicted RBP16.3■□□□□ 0.2
MRPL55-220ENST00000411464 ZNF517Q6ZMY9 492 aaPredicted RBP16.3■□□□□ 0.2
MRPL55-220ENST00000411464 GLT6D1Q7Z4J2 308 aa16.3■□□□□ 0.2
MRPL55-220ENST00000411464 SLC38A9Q8NBW4 561 aa16.3■□□□□ 0.2
MRPL55-220ENST00000411464 SLC35G2Q8TBE7 412 aa16.3■□□□□ 0.2
MRPL55-220ENST00000411464 BLOC1S5Q8TDH9 187 aa16.3■□□□□ 0.2
MRPL55-220ENST00000411464 TFB1MQ8WVM0 346 aaKnown RBP16.3■□□□□ 0.2
MRPL55-220ENST00000411464 CPT1BQ92523 772 aa16.3■□□□□ 0.2
MRPL55-220ENST00000411464 RNF25Q96BH1 459 aaPredicted RBP16.3■□□□□ 0.2
MRPL55-220ENST00000411464 C12orf66Q96MD2 445 aa16.3■□□□□ 0.2
MRPL55-220ENST00000411464 LRFN5Q96NI6 719 aa16.3■□□□□ 0.2
MRPL55-220ENST00000411464 INSM2Q96T92 566 aaPredicted RBP16.3■□□□□ 0.2
MRPL55-220ENST00000411464 SLC29A3Q9BZD2 475 aa16.3■□□□□ 0.2
MRPL55-220ENST00000411464 WWP1Q9H0M0 922 aa16.3■□□□□ 0.2
MRPL55-220ENST00000411464 DEF6Q9H4E7 631 aa16.3■□□□□ 0.2
MRPL55-220ENST00000411464 FANCEQ9HB96 536 aa16.3■□□□□ 0.2
MRPL55-220ENST00000411464 CASS4Q9NQ75 786 aa16.3■□□□□ 0.2
MRPL55-220ENST00000411464 LATS2Q9NRM7 1088 aa16.3■□□□□ 0.2
MRPL55-220ENST00000411464 SLC24A2Q9UI40 661 aa16.3■□□□□ 0.2
MRPL55-220ENST00000411464 ACSL5Q9ULC5 683 aa16.3■□□□□ 0.2
MRPL55-220ENST00000411464 COLEC10Q9Y6Z7 277 aa16.3■□□□□ 0.2
MRPL55-220ENST00000411464 SPTAN1Q13813 2472 aaKnown RBP16.3■□□□□ 0.2
MRPL55-220ENST00000411464 SSU72P8A0A1W2PR75 194 aa16.29■□□□□ 0.2
MRPL55-220ENST00000411464 KLHL33A6NCF5 533 aa16.29■□□□□ 0.2
MRPL55-220ENST00000411464 MGAT4DA6NG13 374 aa16.29■□□□□ 0.2
MRPL55-220ENST00000411464 ZNF185O15231 689 aa16.29■□□□□ 0.2
MRPL55-220ENST00000411464 GPR39O43194 453 aa16.29■□□□□ 0.2
MRPL55-220ENST00000411464 BUD23O43709 281 aaKnown RBP16.29■□□□□ 0.2
MRPL55-220ENST00000411464 TMEM63AO94886 807 aa16.29■□□□□ 0.2
MRPL55-220ENST00000411464 TMEM253P0C7T8 217 aa16.29■□□□□ 0.2
MRPL55-220ENST00000411464 ARHGAP25P42331 645 aa16.29■□□□□ 0.2
MRPL55-220ENST00000411464 NR2C2P49116 596 aa16.29■□□□□ 0.2
MRPL55-220ENST00000411464 PRKAA1Q13131 559 aa16.29■□□□□ 0.2
MRPL55-220ENST00000411464 KRT33BQ14525 404 aa16.29■□□□□ 0.2
MRPL55-220ENST00000411464 GSE1Q14687 1217 aa16.29■□□□□ 0.2
MRPL55-220ENST00000411464 EIF2S3LQ2VIR3 472 aaKnown RBP16.29■□□□□ 0.2
MRPL55-220ENST00000411464 PLEKHS1Q5SXH7 462 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms