RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 RTP4Q96DX8 246 aa14.25□□□□□ -0.13
NIF3L1-205ENST00000409588 MED8Q96G25 268 aa14.25□□□□□ -0.13
NIF3L1-205ENST00000409588 ALS2CR12Q96Q35 445 aa14.25□□□□□ -0.13
NIF3L1-205ENST00000409588 COPS8Q99627 209 aa14.25□□□□□ -0.13
NIF3L1-205ENST00000409588 SPRY4Q9C004 299 aa14.25□□□□□ -0.13
NIF3L1-205ENST00000409588 VPS37BQ9H9H4 285 aa14.25□□□□□ -0.13
NIF3L1-205ENST00000409588 CRLS1Q9UJA2 301 aa14.25□□□□□ -0.13
NIF3L1-205ENST00000409588 PILRAQ9UKJ1 303 aa14.25□□□□□ -0.13
NIF3L1-205ENST00000409588 HEBP2Q9Y5Z4 205 aa14.25□□□□□ -0.13
NIF3L1-205ENST00000409588 SLC30A1Q9Y6M5 507 aa14.25□□□□□ -0.13
NIF3L1-205ENST00000409588 AHCTF1Q8WYP5 2266 aa14.25□□□□□ -0.13
NIF3L1-205ENST00000409588 SMG1Q96Q15 3661 aaKnown RBP14.24□□□□□ -0.13
NIF3L1-205ENST00000409588 OR2AG2A6NM03 316 aa14.24□□□□□ -0.13
NIF3L1-205ENST00000409588 F5H423 210 aaPredicted RBP14.24□□□□□ -0.13
NIF3L1-205ENST00000409588 LDB2O43679 373 aa14.24□□□□□ -0.13
NIF3L1-205ENST00000409588 BUD23O43709 281 aaKnown RBP14.24□□□□□ -0.13
NIF3L1-205ENST00000409588 AP2A1O95782 977 aa14.24□□□□□ -0.13
NIF3L1-205ENST00000409588 ATP1B2P14415 290 aaPredicted RBP14.24□□□□□ -0.13
NIF3L1-205ENST00000409588 CTSCP53634 463 aa14.24□□□□□ -0.13
NIF3L1-205ENST00000409588 DRG2P55039 364 aaKnown RBP14.24□□□□□ -0.13
NIF3L1-205ENST00000409588 GPR18Q14330 331 aa14.24□□□□□ -0.13
NIF3L1-205ENST00000409588 SEPT7Q16181 437 aaKnown RBP14.24□□□□□ -0.13
NIF3L1-205ENST00000409588 RPE65Q16518 533 aa14.24□□□□□ -0.13
NIF3L1-205ENST00000409588 SKIDA1Q1XH10 827 aa14.24□□□□□ -0.13
NIF3L1-205ENST00000409588 PLA2G4EQ3MJ16 856 aa14.24□□□□□ -0.13
NIF3L1-205ENST00000409588 FNBP1LQ5T0N5 605 aa14.24□□□□□ -0.13
NIF3L1-205ENST00000409588 SEL1L2Q5TEA6 688 aa14.24□□□□□ -0.13
NIF3L1-205ENST00000409588 AADACL2Q6P093 401 aa14.24□□□□□ -0.13
NIF3L1-205ENST00000409588 PCSK4Q6UW60 755 aa14.24□□□□□ -0.13
NIF3L1-205ENST00000409588 C4orf22Q6V702 233 aa14.24□□□□□ -0.13
NIF3L1-205ENST00000409588 PRSS42Q7Z5A4 293 aa14.24□□□□□ -0.13
NIF3L1-205ENST00000409588 KMT5CQ86Y97 462 aa14.24□□□□□ -0.13
NIF3L1-205ENST00000409588 NLGN4XQ8N0W4 816 aa14.24□□□□□ -0.13
NIF3L1-205ENST00000409588 NXPE1Q8N323 547 aa14.24□□□□□ -0.13
NIF3L1-205ENST00000409588 SPC24Q8NBT2 197 aa14.24□□□□□ -0.13
NIF3L1-205ENST00000409588 NLGN4YQ8NFZ3 816 aaPredicted RBP14.24□□□□□ -0.13
NIF3L1-205ENST00000409588 STYXQ8WUJ0 223 aa14.24□□□□□ -0.13
NIF3L1-205ENST00000409588 KLHL6Q8WZ60 621 aa14.24□□□□□ -0.13
NIF3L1-205ENST00000409588 UBXN4Q92575 508 aa14.24□□□□□ -0.13
NIF3L1-205ENST00000409588 KIAA1143Q96AT1 154 aaPredicted RBP14.24□□□□□ -0.13
NIF3L1-205ENST00000409588 FCRL4Q96PJ5 515 aa14.24□□□□□ -0.13
NIF3L1-205ENST00000409588 CD180Q99467 661 aa14.24□□□□□ -0.13
NIF3L1-205ENST00000409588 ZNF768Q9H5H4 540 aaKnown RBP14.24□□□□□ -0.13
NIF3L1-205ENST00000409588 SEMA5BQ9P283 1151 aa14.24□□□□□ -0.13
NIF3L1-205ENST00000409588 TMEM184BQ9Y519 407 aaPredicted RBP14.24□□□□□ -0.13
NIF3L1-205ENST00000409588 ATMQ13315 3056 aa14.23□□□□□ -0.13
NIF3L1-205ENST00000409588 OR52A4PA6NMU1 304 aa14.23□□□□□ -0.13
NIF3L1-205ENST00000409588 F8W8V4 182 aa14.23□□□□□ -0.13
NIF3L1-205ENST00000409588 QSOX1O00391 747 aa14.23□□□□□ -0.13
NIF3L1-205ENST00000409588 FTCDO95954 541 aa14.23□□□□□ -0.13
NIF3L1-205ENST00000409588 PSMA3P25788 255 aa14.23□□□□□ -0.13
NIF3L1-205ENST00000409588 CD151P48509 253 aa14.23□□□□□ -0.13
NIF3L1-205ENST00000409588 ARSDP51689 593 aa14.23□□□□□ -0.13
NIF3L1-205ENST00000409588 ZNF140P52738 457 aaPredicted RBP14.23□□□□□ -0.13
NIF3L1-205ENST00000409588 ABHD18Q0P651 414 aa14.23□□□□□ -0.13
NIF3L1-205ENST00000409588 CRTC2Q53ET0 693 aaPredicted RBP14.23□□□□□ -0.13
NIF3L1-205ENST00000409588 ANKS6Q68DC2 871 aa14.23□□□□□ -0.13
NIF3L1-205ENST00000409588 CACNA2D3Q8IZS8 1091 aa14.23□□□□□ -0.13
NIF3L1-205ENST00000409588 CATSPER2Q96P56 530 aa14.23□□□□□ -0.13
NIF3L1-205ENST00000409588 TTC1Q99614 292 aa14.23□□□□□ -0.13
NIF3L1-205ENST00000409588 APOL2Q9BQE5 337 aa14.23□□□□□ -0.13
NIF3L1-205ENST00000409588 DESI2Q9BSY9 194 aa14.23□□□□□ -0.13
NIF3L1-205ENST00000409588 TMEM121Q9BTD3 319 aa14.23□□□□□ -0.13
NIF3L1-205ENST00000409588 NLE1Q9NVX2 485 aaPredicted RBP14.23□□□□□ -0.13
NIF3L1-205ENST00000409588 WDR70Q9NW82 654 aa14.23□□□□□ -0.13
NIF3L1-205ENST00000409588 OGFRQ9NZT2 677 aa14.23□□□□□ -0.13
NIF3L1-205ENST00000409588 FKBPLQ9UIM3 349 aa14.23□□□□□ -0.13
NIF3L1-205ENST00000409588 WDR37Q9Y2I8 494 aa14.23□□□□□ -0.13
NIF3L1-205ENST00000409588 ZKSCAN5Q9Y2L8 839 aa14.23□□□□□ -0.13
NIF3L1-205ENST00000409588 IGLV3-16A0A075B6K0 115 aa14.22□□□□□ -0.13
NIF3L1-205ENST00000409588 TRBV5-4A0A0C4DH59 114 aa14.22□□□□□ -0.13
NIF3L1-205ENST00000409588 BHMG1C9JSJ3 638 aaPredicted RBP14.22□□□□□ -0.13
NIF3L1-205ENST00000409588 AP3B1O00203 1094 aa14.22□□□□□ -0.13
NIF3L1-205ENST00000409588 AGRPO00253 132 aa14.22□□□□□ -0.13
NIF3L1-205ENST00000409588 NRDCO43847 1150 aa14.22□□□□□ -0.13
NIF3L1-205ENST00000409588 RAD1O60671 282 aa14.22□□□□□ -0.13
NIF3L1-205ENST00000409588 AP2A2O94973 939 aa14.22□□□□□ -0.13
NIF3L1-205ENST00000409588 METTL18O95568 372 aa14.22□□□□□ -0.13
NIF3L1-205ENST00000409588 MT-ND3P03897 115 aa14.22□□□□□ -0.13
NIF3L1-205ENST00000409588 SLC35G4P0C7Q5 338 aa14.22□□□□□ -0.13
NIF3L1-205ENST00000409588 MTHFD1P11586 935 aaKnown RBP14.22□□□□□ -0.13
NIF3L1-205ENST00000409588 TYRP1P17643 537 aa14.22□□□□□ -0.13
NIF3L1-205ENST00000409588 FDFT1P37268 417 aa14.22□□□□□ -0.13
NIF3L1-205ENST00000409588 PRLHRP49683 370 aa14.22□□□□□ -0.13
NIF3L1-205ENST00000409588 MC1RQ01726 317 aa14.22□□□□□ -0.13
NIF3L1-205ENST00000409588 CDH17Q12864 832 aa14.22□□□□□ -0.13
NIF3L1-205ENST00000409588 RPA4Q13156 261 aa14.22□□□□□ -0.13
NIF3L1-205ENST00000409588 NFE2L1Q14494 772 aa14.22□□□□□ -0.13
NIF3L1-205ENST00000409588 PTPRCAPQ14761 206 aa14.22□□□□□ -0.13
NIF3L1-205ENST00000409588 NLRP9Q7RTR0 991 aa14.22□□□□□ -0.13
NIF3L1-205ENST00000409588 ZNF605Q86T29 641 aa14.22□□□□□ -0.13
NIF3L1-205ENST00000409588 ZNF843Q8N446 348 aa14.22□□□□□ -0.13
NIF3L1-205ENST00000409588 ESX1Q8N693 406 aa14.22□□□□□ -0.13
NIF3L1-205ENST00000409588 MAIP1Q8WWC4 291 aa14.22□□□□□ -0.13
NIF3L1-205ENST00000409588 CDKN2AIPNLQ96HQ2 116 aa14.22□□□□□ -0.13
NIF3L1-205ENST00000409588 TGM7Q96PF1 710 aa14.22□□□□□ -0.13
NIF3L1-205ENST00000409588 FAM118BQ9BPY3 351 aa14.22□□□□□ -0.13
NIF3L1-205ENST00000409588 ARHGAP9Q9BRR9 750 aa14.22□□□□□ -0.13
NIF3L1-205ENST00000409588 SIDT1Q9NXL6 827 aaKnown RBP14.22□□□□□ -0.13
NIF3L1-205ENST00000409588 ZDHHC3Q9NYG2 299 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms