RNA–Protein interactions for RNA: ENST00000409435.5

SCN9A-202, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 5,967 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-202ENST00000409435 OR2W6PQ8NHA6 318 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 AGR3Q8TD06 166 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 HIST1H2ACQ93077 130 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 FAM118BQ9BPY3 351 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 PCDH12Q9NPG4 1184 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 RBM12Q9NTZ6 932 aaKnown RBP7.22□□□□□ -1.25
SCN9A-202ENST00000409435 TRNAU1APQ9NX07 287 aaKnown RBP7.22□□□□□ -1.25
SCN9A-202ENST00000409435 PSMC3IPQ9P2W1 217 aaPredicted RBP7.22□□□□□ -1.25
SCN9A-202ENST00000409435 POLG2Q9UHN1 485 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 RAPGEFL1Q9UHV5 662 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 A0A096LPK6 155 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 TEX46H3BTG2 121 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 FAM228BP0C875 321 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 THRAP10827 490 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 CCNA2P20248 432 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 LMO2P25791 158 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 IL12BP29460 328 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 VIPR1P32241 457 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 GP5P40197 560 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 MPLP40238 635 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 MAXP61244 160 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 DEFB133Q30KQ1 61 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 TNFAIP8L3Q5GJ75 292 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 CCDC137Q6PK04 289 aaKnown RBP7.22□□□□□ -1.25
SCN9A-202ENST00000409435 VCPIP1Q96JH7 1222 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 PFDN5Q99471 154 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 CEP41Q9BYV8 373 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 TMEM138Q9NPI0 162 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 CMTM6Q9NX76 183 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 POU2F3Q9UKI9 436 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 HPSEQ9Y251 543 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 ANKRD6Q9Y2G4 727 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 SRRM3A6NNA2 597 aaPredicted RBP7.22□□□□□ -1.25
SCN9A-202ENST00000409435 E9PBE3 544 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 TRAFD1O14545 582 aaPredicted RBP7.22□□□□□ -1.25
SCN9A-202ENST00000409435 MAP2K7O14733 419 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 HAT1O14929 419 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 KMOO15229 486 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 PAK4O96013 591 aaPredicted RBP7.22□□□□□ -1.25
SCN9A-202ENST00000409435 FGF1P05230 155 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 FESP07332 822 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 TMEM253P0C7T8 217 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 TCF4P15884 667 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 ITPKBP27987 946 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 ACADLP28330 430 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 PTPN4P29074 926 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 ABCG1P45844 678 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 SLC16A1P53985 500 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 IL5RAQ01344 420 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 HYAL1Q12794 435 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 ECM1Q16610 540 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 SMU1Q2TAY7 513 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 FMR1NBQ8N0W7 255 aaPredicted RBP7.22□□□□□ -1.25
SCN9A-202ENST00000409435 ZADH2Q8N4Q0 377 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 NECAB3Q96P71 396 aaPredicted RBP7.22□□□□□ -1.25
SCN9A-202ENST00000409435 TBCDQ9BTW9 1192 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 SLC6A15Q9H2J7 730 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 SAV1Q9H4B6 383 aaPredicted RBP7.22□□□□□ -1.25
SCN9A-202ENST00000409435 SP140LQ9H930 580 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.22□□□□□ -1.25
SCN9A-202ENST00000409435 GTF2A1LQ9UNN4 478 aa7.22□□□□□ -1.25
SCN9A-202ENST00000409435 ABLIM1O14639 778 aa7.21□□□□□ -1.25
SCN9A-202ENST00000409435 TULP3O75386 442 aa7.21□□□□□ -1.25
SCN9A-202ENST00000409435 PPM1BO75688 479 aa7.21□□□□□ -1.25
SCN9A-202ENST00000409435 IFNA14P01570 189 aa7.21□□□□□ -1.25
SCN9A-202ENST00000409435 SEC24CP53992 1094 aa7.21□□□□□ -1.25
SCN9A-202ENST00000409435 TAF13Q15543 124 aa7.21□□□□□ -1.25
SCN9A-202ENST00000409435 MYLK3Q32MK0 819 aa7.21□□□□□ -1.25
SCN9A-202ENST00000409435 LRRC73Q5JTD7 316 aa7.21□□□□□ -1.25
SCN9A-202ENST00000409435 ATXN7L2Q5T6C5 722 aaPredicted RBP7.21□□□□□ -1.25
SCN9A-202ENST00000409435 LRRC74BQ6ZQY2 392 aa7.21□□□□□ -1.25
SCN9A-202ENST00000409435 CHSY3Q70JA7 882 aa7.21□□□□□ -1.25
SCN9A-202ENST00000409435 MRPL10Q7Z7H8 261 aaKnown RBP7.21□□□□□ -1.25
SCN9A-202ENST00000409435 METTL16Q86W50 562 aaKnown RBP7.21□□□□□ -1.25
SCN9A-202ENST00000409435 EPHX4Q8IUS5 362 aa7.21□□□□□ -1.25
SCN9A-202ENST00000409435 CYP4Z2PQ8N1L4 340 aa7.21□□□□□ -1.25
SCN9A-202ENST00000409435 OR7A2PQ8NGA2 310 aa7.21□□□□□ -1.25
SCN9A-202ENST00000409435 FRS2Q8WU20 508 aa7.21□□□□□ -1.25
SCN9A-202ENST00000409435 BORCS6Q96GS4 357 aa7.21□□□□□ -1.25
SCN9A-202ENST00000409435 PNO1Q9NRX1 252 aaKnown RBP7.21□□□□□ -1.25
SCN9A-202ENST00000409435 KBTBD4Q9NVX7 518 aa7.21□□□□□ -1.25
SCN9A-202ENST00000409435 MTMR10Q9NXD2 777 aa7.21□□□□□ -1.25
SCN9A-202ENST00000409435 COCHO43405 550 aa7.21□□□□□ -1.25
SCN9A-202ENST00000409435 COMTP21964 271 aa7.21□□□□□ -1.25
SCN9A-202ENST00000409435 CLCN5P51795 746 aa7.21□□□□□ -1.25
SCN9A-202ENST00000409435 NR1H2P55055 460 aa7.21□□□□□ -1.25
SCN9A-202ENST00000409435 RAB15P59190 212 aa7.21□□□□□ -1.25
SCN9A-202ENST00000409435 SLC13A2Q13183 592 aa7.21□□□□□ -1.25
SCN9A-202ENST00000409435 PRKG2Q13237 762 aa7.21□□□□□ -1.25
SCN9A-202ENST00000409435 BIKQ13323 160 aa7.21□□□□□ -1.25
SCN9A-202ENST00000409435 RFTN1Q14699 578 aaPredicted RBP7.21□□□□□ -1.25
SCN9A-202ENST00000409435 FAM214AQ32MH5 1076 aa7.21□□□□□ -1.25
SCN9A-202ENST00000409435 VWA2Q5GFL6 755 aa7.21□□□□□ -1.25
SCN9A-202ENST00000409435 FAM26DQ5JW98 314 aa7.21□□□□□ -1.25
SCN9A-202ENST00000409435 TSSK4Q6SA08 328 aa7.21□□□□□ -1.25
SCN9A-202ENST00000409435 ANKMY2Q8IV38 441 aa7.21□□□□□ -1.25
SCN9A-202ENST00000409435 PSMA8Q8TAA3 256 aa7.21□□□□□ -1.25
SCN9A-202ENST00000409435 RBM18Q96H35 190 aaKnown RBP7.21□□□□□ -1.25
SCN9A-202ENST00000409435 RBM15Q96T37 977 aaKnown RBP eCLIP7.21□□□□□ -1.25
SCN9A-202ENST00000409435 ZNF184Q99676 751 aaPredicted RBP7.21□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms