RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 ACACBO00763 2458 aa19.46■□□□□ 0.71
PDLIM2-207ENST00000409417 A0A1W2PQM1 296 aa19.46■□□□□ 0.71
PDLIM2-207ENST00000409417 GOLGA8KD6RF30 607 aa19.46■□□□□ 0.71
PDLIM2-207ENST00000409417 GOLGA8TH3BQL2 631 aa19.46■□□□□ 0.71
PDLIM2-207ENST00000409417 B4GAT1O43505 415 aa19.46■□□□□ 0.71
PDLIM2-207ENST00000409417 TTC4O95801 387 aa19.46■□□□□ 0.71
PDLIM2-207ENST00000409417 OR56A5P0C7T3 313 aa19.46■□□□□ 0.71
PDLIM2-207ENST00000409417 ALDH4A1P30038 563 aa19.46■□□□□ 0.71
PDLIM2-207ENST00000409417 HALP42357 657 aa19.46■□□□□ 0.71
PDLIM2-207ENST00000409417 ARL4CP56559 192 aa19.46■□□□□ 0.71
PDLIM2-207ENST00000409417 CCL7P80098 99 aa19.46■□□□□ 0.71
PDLIM2-207ENST00000409417 CLCA4Q14CN2 919 aa19.46■□□□□ 0.71
PDLIM2-207ENST00000409417 BBS9Q3SYG4 887 aa19.46■□□□□ 0.71
PDLIM2-207ENST00000409417 XKR5Q6UX68 686 aa19.46■□□□□ 0.71
PDLIM2-207ENST00000409417 RBM44Q6ZP01 1051 aaKnown RBP19.46■□□□□ 0.71
PDLIM2-207ENST00000409417 CFAP206Q8IYR0 622 aa19.46■□□□□ 0.71
PDLIM2-207ENST00000409417 OTUD6BQ8N6M0 293 aa19.46■□□□□ 0.71
PDLIM2-207ENST00000409417 MNS1Q8NEH6 495 aa19.46■□□□□ 0.71
PDLIM2-207ENST00000409417 GFM1Q96RP9 751 aaKnown RBP19.46■□□□□ 0.71
PDLIM2-207ENST00000409417 TCF12Q99081 682 aa19.46■□□□□ 0.71
PDLIM2-207ENST00000409417 UNC13CQ8NB66 2214 aa19.46■□□□□ 0.71
PDLIM2-207ENST00000409417 AKAP13Q12802 2813 aa19.45■□□□□ 0.7
PDLIM2-207ENST00000409417 OR52A4PA6NMU1 304 aa19.45■□□□□ 0.7
PDLIM2-207ENST00000409417 PRMT5O14744 637 aaPredicted RBP19.45■□□□□ 0.7
PDLIM2-207ENST00000409417 CASC3O15234 703 aaKnown RBP19.45■□□□□ 0.7
PDLIM2-207ENST00000409417 NDUFS3O75489 264 aa19.45■□□□□ 0.7
PDLIM2-207ENST00000409417 BANF1O75531 89 aa19.45■□□□□ 0.7
PDLIM2-207ENST00000409417 FTH1P02794 183 aa19.45■□□□□ 0.7
PDLIM2-207ENST00000409417 SLC19A1P41440 591 aa19.45■□□□□ 0.7
PDLIM2-207ENST00000409417 OR1D5P58170 312 aa19.45■□□□□ 0.7
PDLIM2-207ENST00000409417 CALCOCO2Q13137 446 aa19.45■□□□□ 0.7
PDLIM2-207ENST00000409417 TARDBPQ13148 414 aaKnown RBP eCLIP19.45■□□□□ 0.7
PDLIM2-207ENST00000409417 SPIDRQ14159 915 aa19.45■□□□□ 0.7
PDLIM2-207ENST00000409417 LONRF1Q17RB8 773 aa19.45■□□□□ 0.7
PDLIM2-207ENST00000409417 TYSND1Q2T9J0 566 aa19.45■□□□□ 0.7
PDLIM2-207ENST00000409417 MARCH9Q86YJ5 346 aa19.45■□□□□ 0.7
PDLIM2-207ENST00000409417 LRRC39Q96DD0 335 aa19.45■□□□□ 0.7
PDLIM2-207ENST00000409417 PWWP2AQ96N64 755 aa19.45■□□□□ 0.7
PDLIM2-207ENST00000409417 DEPDC7Q96QD5 511 aa19.45■□□□□ 0.7
PDLIM2-207ENST00000409417 SLC38A3Q99624 504 aa19.45■□□□□ 0.7
PDLIM2-207ENST00000409417 RAB17Q9H0T7 212 aa19.45■□□□□ 0.7
PDLIM2-207ENST00000409417 POT1Q9NUX5 634 aa19.45■□□□□ 0.7
PDLIM2-207ENST00000409417 FAM8A1Q9UBU6 413 aa19.45■□□□□ 0.7
PDLIM2-207ENST00000409417 PSMD13Q9UNM6 376 aa19.45■□□□□ 0.7
PDLIM2-207ENST00000409417 FAM169AQ9Y6X4 670 aa19.45■□□□□ 0.7
PDLIM2-207ENST00000409417 PTPRBP23467 1997 aa19.45■□□□□ 0.7
PDLIM2-207ENST00000409417 PFDN6O15212 129 aa19.44■□□□□ 0.7
PDLIM2-207ENST00000409417 VIPP01282 170 aa19.44■□□□□ 0.7
PDLIM2-207ENST00000409417 OGNP20774 298 aaKnown RBP19.44■□□□□ 0.7
PDLIM2-207ENST00000409417 RPA4Q13156 261 aa19.44■□□□□ 0.7
PDLIM2-207ENST00000409417 RNF187Q5TA31 235 aaPredicted RBP19.44■□□□□ 0.7
PDLIM2-207ENST00000409417 LRRC6Q86X45 466 aa19.44■□□□□ 0.7
PDLIM2-207ENST00000409417 CILP2Q8IUL8 1156 aa19.44■□□□□ 0.7
PDLIM2-207ENST00000409417 IGDCC3Q8IVU1 814 aa19.44■□□□□ 0.7
PDLIM2-207ENST00000409417 TRIM48Q8IWZ4 208 aa19.44■□□□□ 0.7
PDLIM2-207ENST00000409417 LILRA3Q8N6C8 439 aaPredicted RBP19.44■□□□□ 0.7
PDLIM2-207ENST00000409417 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.44■□□□□ 0.7
PDLIM2-207ENST00000409417 LDHAL6BQ9BYZ2 381 aaPredicted RBP19.44■□□□□ 0.7
PDLIM2-207ENST00000409417 DPH5Q9H2P9 285 aa19.44■□□□□ 0.7
PDLIM2-207ENST00000409417 SYNDIG1Q9H7V2 258 aa19.44■□□□□ 0.7
PDLIM2-207ENST00000409417 COG4Q9H9E3 785 aa19.44■□□□□ 0.7
PDLIM2-207ENST00000409417 UCK1Q9HA47 277 aa19.44■□□□□ 0.7
PDLIM2-207ENST00000409417 SLC40A1Q9NP59 571 aa19.44■□□□□ 0.7
PDLIM2-207ENST00000409417 KCNK4Q9NYG8 393 aa19.44■□□□□ 0.7
PDLIM2-207ENST00000409417 PIKFYVEQ9Y2I7 2098 aa19.43■□□□□ 0.7
PDLIM2-207ENST00000409417 D6RAR5 112 aa19.43■□□□□ 0.7
PDLIM2-207ENST00000409417 SLC35G4P0C7Q5 338 aa19.43■□□□□ 0.7
PDLIM2-207ENST00000409417 RPS3P23396 243 aaKnown RBP eCLIP19.43■□□□□ 0.7
PDLIM2-207ENST00000409417 GPLD1P80108 840 aa19.43■□□□□ 0.7
PDLIM2-207ENST00000409417 CBLBQ13191 982 aa19.43■□□□□ 0.7
PDLIM2-207ENST00000409417 SQSTM1Q13501 440 aa19.43■□□□□ 0.7
PDLIM2-207ENST00000409417 THOC5Q13769 683 aaKnown RBP19.43■□□□□ 0.7
PDLIM2-207ENST00000409417 CRYMQ14894 314 aa19.43■□□□□ 0.7
PDLIM2-207ENST00000409417 RPE65Q16518 533 aa19.43■□□□□ 0.7
PDLIM2-207ENST00000409417 CLPPQ16740 277 aaPredicted RBP19.43■□□□□ 0.7
PDLIM2-207ENST00000409417 AMZ1Q400G9 498 aa19.43■□□□□ 0.7
PDLIM2-207ENST00000409417 ZNF761Q86XN6 746 aaPredicted RBP19.43■□□□□ 0.7
PDLIM2-207ENST00000409417 RBM12BQ8IXT5 1001 aaKnown RBP19.43■□□□□ 0.7
PDLIM2-207ENST00000409417 GRAMD1AQ96CP6 724 aa19.43■□□□□ 0.7
PDLIM2-207ENST00000409417 CXorf40BQ96DE9 158 aa19.43■□□□□ 0.7
PDLIM2-207ENST00000409417 WWP1Q9H0M0 922 aa19.43■□□□□ 0.7
PDLIM2-207ENST00000409417 C20orf96Q9NUD7 363 aaPredicted RBP19.43■□□□□ 0.7
PDLIM2-207ENST00000409417 GRHL1Q9NZI5 618 aa19.43■□□□□ 0.7
PDLIM2-207ENST00000409417 IL1RAPL1Q9NZN1 696 aa19.43■□□□□ 0.7
PDLIM2-207ENST00000409417 VPS9D1Q9Y2B5 631 aa19.43■□□□□ 0.7
PDLIM2-207ENST00000409417 TEX264Q9Y6I9 313 aa19.43■□□□□ 0.7
PDLIM2-207ENST00000409417 IGHV1OR21-1A0A087WYE8 117 aa19.42■□□□□ 0.7
PDLIM2-207ENST00000409417 LIN7AO14910 233 aaPredicted RBP19.42■□□□□ 0.7
PDLIM2-207ENST00000409417 CD1CP29017 333 aa19.42■□□□□ 0.7
PDLIM2-207ENST00000409417 ELK3P41970 407 aa19.42■□□□□ 0.7
PDLIM2-207ENST00000409417 ADARP55265 1226 aaKnown RBP19.42■□□□□ 0.7
PDLIM2-207ENST00000409417 CAMK2BQ13554 666 aa19.42■□□□□ 0.7
PDLIM2-207ENST00000409417 ISXQ2M1V0 245 aa19.42■□□□□ 0.7
PDLIM2-207ENST00000409417 SPANXN3Q5MJ09 141 aa19.42■□□□□ 0.7
PDLIM2-207ENST00000409417 ZNF470Q6ECI4 717 aa19.42■□□□□ 0.7
PDLIM2-207ENST00000409417 CAPRIN2Q6IMN6 1127 aaKnown RBP19.42■□□□□ 0.7
PDLIM2-207ENST00000409417 C8orf74Q6P047 294 aa19.42■□□□□ 0.7
PDLIM2-207ENST00000409417 ZNF449Q6P9G9 518 aa19.42■□□□□ 0.7
PDLIM2-207ENST00000409417 TMEM26Q6ZUK4 368 aa19.42■□□□□ 0.7
PDLIM2-207ENST00000409417 LMNTD2Q8IXW0 634 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms