RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 NTN4Q9HB63 628 aa10.51□□□□□ -0.73
NIF3L1-204ENST00000409357 DDX28Q9NUL7 540 aaKnown RBP10.51□□□□□ -0.73
NIF3L1-204ENST00000409357 EIF3KQ9UBQ5 218 aaKnown RBP10.51□□□□□ -0.73
NIF3L1-204ENST00000409357 DNMT3LQ9UJW3 386 aa10.51□□□□□ -0.73
NIF3L1-204ENST00000409357 AP4E1Q9UPM8 1137 aa10.51□□□□□ -0.73
NIF3L1-204ENST00000409357 TPRKBQ9Y3C4 175 aa10.51□□□□□ -0.73
NIF3L1-204ENST00000409357 PCDHB3Q9Y5E6 796 aa10.51□□□□□ -0.73
NIF3L1-204ENST00000409357 CSNK1G3Q9Y6M4 447 aa10.51□□□□□ -0.73
NIF3L1-204ENST00000409357 COL4A6Q14031 1691 aa10.51□□□□□ -0.73
NIF3L1-204ENST00000409357 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 LINC00862A6NCI5 91 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 RFXAPO00287 272 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 SLC9A3R1O14745 358 aaPredicted RBP10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 HNRNPDLO14979 420 aaKnown RBP10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 TBX1O43435 398 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 B4GAT1O43505 415 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 NDUFA2O43678 99 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 PRPSAP2O60256 369 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 DLX3O60479 287 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 GPD1P21695 349 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 ATP5F1P24539 256 aaPredicted RBP10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 OXTRP30559 389 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 TALDO1P37837 337 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 TKTL1P51854 596 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 JAK3P52333 1124 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 MLLT6P55198 1093 aaPredicted RBP10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 CSNK2BP67870 215 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 GPLD1P80108 840 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 CD47Q08722 323 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 TRAF3Q13114 568 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 TOR1AIP1Q5JTV8 583 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 FAM26DQ5JW98 314 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 ZNF691Q5VV52 312 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 SPATC1Q76KD6 591 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 PIGZQ86VD9 579 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 PLD3Q8IV08 490 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 FUNDC1Q8IVP5 155 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 RAVER1Q8IY67 606 aaKnown RBP10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 MCPH1Q8NEM0 835 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 OR52E4Q8NGH9 312 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 OR5H6Q8NGV6 325 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 OR10Z1Q8NGY1 313 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 MAFAQ8NHW3 353 aaPredicted RBP10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 METTL2AQ96IZ6 378 aaKnown RBP10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 C1QTNF7Q9BXJ2 289 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 CMTM6Q9NX76 183 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 CCDC167Q9P0B6 97 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 GABBR1Q9UBS5 961 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 PCSK1NQ9UHG2 260 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 STOML2Q9UJZ1 356 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 VPS4AQ9UN37 437 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 SNX7Q9UNH6 387 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 MAFBQ9Y5Q3 323 aaPredicted RBP10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 NLRC5Q86WI3 1866 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 ABHD14A-ACY1A0A1B0GW23 586 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 TMEM150BA6NC51 233 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 C2CD4BA6NLJ0 364 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 FAM25EA8MYX2 175 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 ARHGEF9O43307 516 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 XYLBO75191 536 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 GJB5O95377 273 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 ITGAMP11215 1152 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 CFL1P23528 166 aaKnown RBP10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 MGAT1P26572 445 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 GGT5P36269 586 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 LIG4P49917 911 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 CDH13P55290 713 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 SLC35A2P78381 396 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 SURF1Q15526 300 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 FAM205BPQ63HN1 556 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 SCARA5Q6ZMJ2 495 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 OSTM1Q86WC4 334 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 RAB43Q86YS6 212 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 SETD9Q8NE22 299 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 FLCNQ8NFG4 579 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 FAM110BQ8TC76 370 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 PHOSPHO2Q8TCD6 241 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 TMEM125Q96AQ2 219 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 HSFY1Q96LI6 401 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 PPP1R16BQ96T49 567 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 RBM4BQ9BQ04 359 aaKnown RBP10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 C17orf62Q9BQA9 187 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 TARS2Q9BW92 718 aaKnown RBP10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 RBM4Q9BWF3 364 aaKnown RBP10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 DGCR6LQ9BY27 220 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 DPEP3Q9H4B8 488 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 RHOJQ9H4E5 214 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 TASP1Q9H6P5 420 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 AGO3Q9H9G7 860 aaKnown RBP10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 CISHQ9NSE2 258 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 ADPRHL2Q9NX46 363 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 TOR4AQ9NXH8 423 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 PAQR5Q9NXK6 330 aaPredicted RBP10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 ATPIF1Q9UII2 106 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 KLHL21Q9UJP4 597 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 C3orf18Q9UK00 162 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 PCDHGB6Q9Y5F9 930 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 PCDHA10Q9Y5I2 948 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 TTC3P53804 2025 aa10.5□□□□□ -0.73
NIF3L1-204ENST00000409357 A0A0G2JMP0 313 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 135.9 ms