RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 TTC30BQ8N4P2 665 aa7.59□□□□□ -1.19
LSM5-202ENST00000409292 PLPP7Q8NBV4 271 aa7.59□□□□□ -1.19
LSM5-202ENST00000409292 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.59□□□□□ -1.19
LSM5-202ENST00000409292 MAML1Q92585 1016 aa7.59□□□□□ -1.19
LSM5-202ENST00000409292 RSC1A1Q92681 617 aa7.59□□□□□ -1.19
LSM5-202ENST00000409292 PNPLA2Q96AD5 504 aa7.59□□□□□ -1.19
LSM5-202ENST00000409292 CLIP3Q96DZ5 547 aa7.59□□□□□ -1.19
LSM5-202ENST00000409292 SLC41A2Q96JW4 573 aa7.59□□□□□ -1.19
LSM5-202ENST00000409292 NSMCE3Q96MG7 304 aa7.59□□□□□ -1.19
LSM5-202ENST00000409292 TSGA13Q96PP4 275 aa7.59□□□□□ -1.19
LSM5-202ENST00000409292 TUBB2BQ9BVA1 445 aa7.59□□□□□ -1.19
LSM5-202ENST00000409292 NUP85Q9BW27 656 aa7.59□□□□□ -1.19
LSM5-202ENST00000409292 HAUS4Q9H6D7 363 aa7.59□□□□□ -1.19
LSM5-202ENST00000409292 CBX8Q9HC52 389 aa7.59□□□□□ -1.19
LSM5-202ENST00000409292 MAGEE1Q9HCI5 957 aa7.59□□□□□ -1.19
LSM5-202ENST00000409292 SLC40A1Q9NP59 571 aa7.59□□□□□ -1.19
LSM5-202ENST00000409292 AGPAT4Q9NRZ5 378 aa7.59□□□□□ -1.19
LSM5-202ENST00000409292 KCND1Q9NSA2 647 aa7.59□□□□□ -1.19
LSM5-202ENST00000409292 ETNK2Q9NVF9 386 aa7.59□□□□□ -1.19
LSM5-202ENST00000409292 TAS2R14Q9NYV8 317 aa7.59□□□□□ -1.19
LSM5-202ENST00000409292 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.59□□□□□ -1.19
LSM5-202ENST00000409292 C5AR2Q9P296 337 aa7.59□□□□□ -1.19
LSM5-202ENST00000409292 CNOT6Q9ULM6 557 aaKnown RBP7.59□□□□□ -1.19
LSM5-202ENST00000409292 SLC5A6Q9Y289 635 aa7.59□□□□□ -1.19
LSM5-202ENST00000409292 BZW2Q9Y6E2 419 aaKnown RBP7.59□□□□□ -1.19
LSM5-202ENST00000409292 FLNCQ14315 2725 aa7.59□□□□□ -1.19
LSM5-202ENST00000409292 LRRC53A6NM62 1247 aa7.58□□□□□ -1.2
LSM5-202ENST00000409292 MATN2O00339 956 aa7.58□□□□□ -1.2
LSM5-202ENST00000409292 CHUKO15111 745 aa7.58□□□□□ -1.2
LSM5-202ENST00000409292 KIF1CO43896 1103 aaKnown RBP7.58□□□□□ -1.2
LSM5-202ENST00000409292 SEMA7AO75326 666 aa7.58□□□□□ -1.2
LSM5-202ENST00000409292 ZBTB11O95625 1053 aaPredicted RBP7.58□□□□□ -1.2
LSM5-202ENST00000409292 HBQ1P09105 142 aa7.58□□□□□ -1.2
LSM5-202ENST00000409292 FURINP09958 794 aa7.58□□□□□ -1.2
LSM5-202ENST00000409292 RAB40ALP0C0E4 278 aa7.58□□□□□ -1.2
LSM5-202ENST00000409292 PYGMP11217 842 aa7.58□□□□□ -1.2
LSM5-202ENST00000409292 CD86P42081 329 aa7.58□□□□□ -1.2
LSM5-202ENST00000409292 VAV2P52735 878 aa7.58□□□□□ -1.2
LSM5-202ENST00000409292 PAFAH1B3Q15102 231 aaKnown RBP7.58□□□□□ -1.2
LSM5-202ENST00000409292 STX1AQ16623 288 aa7.58□□□□□ -1.2
LSM5-202ENST00000409292 ZRANB3Q5FWF4 1079 aa7.58□□□□□ -1.2
LSM5-202ENST00000409292 IRAK1BP1Q5VVH5 260 aa7.58□□□□□ -1.2
LSM5-202ENST00000409292 IZUMO3Q5VZ72 239 aa7.58□□□□□ -1.2
LSM5-202ENST00000409292 PAPD7Q5XG87 772 aaKnown RBP7.58□□□□□ -1.2
LSM5-202ENST00000409292 JMJD6Q6NYC1 403 aaPredicted RBP7.58□□□□□ -1.2
LSM5-202ENST00000409292 ZNF449Q6P9G9 518 aa7.58□□□□□ -1.2
LSM5-202ENST00000409292 ADGRG6Q86SQ4 1221 aa7.58□□□□□ -1.2
LSM5-202ENST00000409292 ARFGAP1Q8N6T3 406 aa7.58□□□□□ -1.2
LSM5-202ENST00000409292 CLEC1AQ8NC01 280 aa7.58□□□□□ -1.2
LSM5-202ENST00000409292 ZFPM2Q8WW38 1151 aa7.58□□□□□ -1.2
LSM5-202ENST00000409292 N4BP2L2Q92802 583 aaPredicted RBP7.58□□□□□ -1.2
LSM5-202ENST00000409292 FER1L6-AS2Q96M78 137 aa7.58□□□□□ -1.2
LSM5-202ENST00000409292 LRFN5Q96NI6 719 aa7.58□□□□□ -1.2
LSM5-202ENST00000409292 DPH2Q9BQC3 489 aaPredicted RBP7.58□□□□□ -1.2
LSM5-202ENST00000409292 ZNF670Q9BS34 389 aa7.58□□□□□ -1.2
LSM5-202ENST00000409292 MAK16Q9BXY0 300 aaKnown RBP7.58□□□□□ -1.2
LSM5-202ENST00000409292 TRIM55Q9BYV6 548 aa7.58□□□□□ -1.2
LSM5-202ENST00000409292 ILKAPQ9H0C8 392 aaPredicted RBP7.58□□□□□ -1.2
LSM5-202ENST00000409292 LATS2Q9NRM7 1088 aa7.58□□□□□ -1.2
LSM5-202ENST00000409292 HRASLS2Q9NWW9 162 aa7.58□□□□□ -1.2
LSM5-202ENST00000409292 OGFRQ9NZT2 677 aa7.58□□□□□ -1.2
LSM5-202ENST00000409292 ZNF624Q9P2J8 865 aaPredicted RBP7.58□□□□□ -1.2
LSM5-202ENST00000409292 NFKBIL1Q9UBC1 381 aaPredicted RBP7.58□□□□□ -1.2
LSM5-202ENST00000409292 TRIM10Q9UDY6 481 aa7.58□□□□□ -1.2
LSM5-202ENST00000409292 GPN3Q9UHW5 284 aaPredicted RBP7.58□□□□□ -1.2
LSM5-202ENST00000409292 SERTAD3Q9UJW9 196 aa7.58□□□□□ -1.2
LSM5-202ENST00000409292 ANAPC7Q9UJX3 599 aa7.58□□□□□ -1.2
LSM5-202ENST00000409292 SLC30A1Q9Y6M5 507 aa7.58□□□□□ -1.2
LSM5-202ENST00000409292 COLEC10Q9Y6Z7 277 aa7.58□□□□□ -1.2
LSM5-202ENST00000409292 CACNA1DQ01668 2161 aa7.57□□□□□ -1.2
LSM5-202ENST00000409292 A0A0U1RQS6 177 aa7.57□□□□□ -1.2
LSM5-202ENST00000409292 LRRC10BA6NIK2 292 aa7.57□□□□□ -1.2
LSM5-202ENST00000409292 A6NL46 340 aa7.57□□□□□ -1.2
LSM5-202ENST00000409292 OR52A4PA6NMU1 304 aa7.57□□□□□ -1.2
LSM5-202ENST00000409292 SMTNL1A8MU46 457 aa7.57□□□□□ -1.2
LSM5-202ENST00000409292 TCP11X1B4DZS4 312 aa7.57□□□□□ -1.2
LSM5-202ENST00000409292 GOLGA6L22H0YM25 854 aa7.57□□□□□ -1.2
LSM5-202ENST00000409292 PPP1R12AO14974 1030 aaPredicted RBP7.57□□□□□ -1.2
LSM5-202ENST00000409292 ZNF185O15231 689 aa7.57□□□□□ -1.2
LSM5-202ENST00000409292 MFSD11O43934 449 aa7.57□□□□□ -1.2
LSM5-202ENST00000409292 SORBS2O94875 1100 aaKnown RBP7.57□□□□□ -1.2
LSM5-202ENST00000409292 IGHA1P01876 353 aa7.57□□□□□ -1.2
LSM5-202ENST00000409292 PDGFAP04085 211 aa7.57□□□□□ -1.2
LSM5-202ENST00000409292 HLA-DQB2P05538 268 aa7.57□□□□□ -1.2
LSM5-202ENST00000409292 SLC35G4P0C7Q5 338 aa7.57□□□□□ -1.2
LSM5-202ENST00000409292 EBLN1P0CF75 366 aa7.57□□□□□ -1.2
LSM5-202ENST00000409292 CYP2A7P20853 494 aa7.57□□□□□ -1.2
LSM5-202ENST00000409292 IL1R2P27930 398 aa7.57□□□□□ -1.2
LSM5-202ENST00000409292 NDUFS1P28331 727 aa7.57□□□□□ -1.2
LSM5-202ENST00000409292 MSX1P28360 303 aa7.57□□□□□ -1.2
LSM5-202ENST00000409292 GJC1P36383 396 aa7.57□□□□□ -1.2
LSM5-202ENST00000409292 DRG2P55039 364 aaKnown RBP7.57□□□□□ -1.2
LSM5-202ENST00000409292 GDF10P55107 478 aa7.57□□□□□ -1.2
LSM5-202ENST00000409292 CHAF1BQ13112 559 aa7.57□□□□□ -1.2
LSM5-202ENST00000409292 ITGA9Q13797 1035 aa7.57□□□□□ -1.2
LSM5-202ENST00000409292 GALNT3Q14435 633 aa7.57□□□□□ -1.2
LSM5-202ENST00000409292 NFKBIBQ15653 356 aa7.57□□□□□ -1.2
LSM5-202ENST00000409292 PPP2R5EQ16537 467 aa7.57□□□□□ -1.2
LSM5-202ENST00000409292 LONRF2Q1L5Z9 754 aa7.57□□□□□ -1.2
LSM5-202ENST00000409292 LDLRAP1Q5SW96 308 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms