RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 RBM12BQ8IXT5 1001 aaKnown RBP17.58■□□□□ 0.41
PDLIM2-206ENST00000409141 OR4D9Q8NGE8 314 aa17.58■□□□□ 0.41
PDLIM2-206ENST00000409141 PRR11Q96HE9 360 aaPredicted RBP17.58■□□□□ 0.41
PDLIM2-206ENST00000409141 ZNF578Q96N58 590 aaPredicted RBP17.58■□□□□ 0.41
PDLIM2-206ENST00000409141 SLC46A1Q96NT5 459 aa17.58■□□□□ 0.41
PDLIM2-206ENST00000409141 CCM2Q9BSQ5 444 aa17.58■□□□□ 0.41
PDLIM2-206ENST00000409141 WWP1Q9H0M0 922 aa17.58■□□□□ 0.41
PDLIM2-206ENST00000409141 DDX47Q9H0S4 455 aaKnown RBP17.58■□□□□ 0.41
PDLIM2-206ENST00000409141 VPS37BQ9H9H4 285 aa17.58■□□□□ 0.41
PDLIM2-206ENST00000409141 SYBUQ9NX95 663 aa17.58■□□□□ 0.41
PDLIM2-206ENST00000409141 ANAPC5Q9UJX4 755 aa17.58■□□□□ 0.41
PDLIM2-206ENST00000409141 URB1O60287 2271 aaKnown RBP17.58■□□□□ 0.4
PDLIM2-206ENST00000409141 PRAMEF33A0A0G2JMD5 474 aa17.57■□□□□ 0.4
PDLIM2-206ENST00000409141 C17orf113A0A1B0GUU1 675 aa17.57■□□□□ 0.4
PDLIM2-206ENST00000409141 LILRA5A6NI73 299 aa17.57■□□□□ 0.4
PDLIM2-206ENST00000409141 TLX3O43711 291 aaPredicted RBP17.57■□□□□ 0.4
PDLIM2-206ENST00000409141 AVILO75366 819 aa17.57■□□□□ 0.4
PDLIM2-206ENST00000409141 DXOO77932 396 aaKnown RBP17.57■□□□□ 0.4
PDLIM2-206ENST00000409141 AP2A2O94973 939 aa17.57■□□□□ 0.4
PDLIM2-206ENST00000409141 TNFSF15O95150 251 aa17.57■□□□□ 0.4
PDLIM2-206ENST00000409141 HGFP14210 728 aa17.57■□□□□ 0.4
PDLIM2-206ENST00000409141 CSF2RBP32927 897 aa17.57■□□□□ 0.4
PDLIM2-206ENST00000409141 NSG1P42857 185 aa17.57■□□□□ 0.4
PDLIM2-206ENST00000409141 CERS6Q6ZMG9 384 aa17.57■□□□□ 0.4
PDLIM2-206ENST00000409141 C17orf53Q8N3J3 647 aaPredicted RBP17.57■□□□□ 0.4
PDLIM2-206ENST00000409141 HM13Q8TCT9 377 aa17.57■□□□□ 0.4
PDLIM2-206ENST00000409141 TMEM159Q96B96 161 aa17.57■□□□□ 0.4
PDLIM2-206ENST00000409141 SGSM3Q96HU1 749 aa17.57■□□□□ 0.4
PDLIM2-206ENST00000409141 CCDC74BQ96LY2 380 aa17.57■□□□□ 0.4
PDLIM2-206ENST00000409141 CMKLR1Q99788 373 aa17.57■□□□□ 0.4
PDLIM2-206ENST00000409141 KIFC1Q9BW19 673 aa17.57■□□□□ 0.4
PDLIM2-206ENST00000409141 EPB41L1Q9H4G0 881 aa17.57■□□□□ 0.4
PDLIM2-206ENST00000409141 KCND1Q9NSA2 647 aa17.57■□□□□ 0.4
PDLIM2-206ENST00000409141 IMP3Q9NV31 184 aaKnown RBP17.57■□□□□ 0.4
PDLIM2-206ENST00000409141 AKAP7Q9P0M2 348 aaPredicted RBP17.57■□□□□ 0.4
PDLIM2-206ENST00000409141 TMEM9Q9P0T7 183 aa17.57■□□□□ 0.4
PDLIM2-206ENST00000409141 LOXL2Q9Y4K0 774 aa17.57■□□□□ 0.4
PDLIM2-206ENST00000409141 KIF26BQ2KJY2 2108 aa17.57■□□□□ 0.4
PDLIM2-206ENST00000409141 CACNA1BQ00975 2339 aa17.57■□□□□ 0.4
PDLIM2-206ENST00000409141 GOLGA8MH3BSY2 632 aa17.56■□□□□ 0.4
PDLIM2-206ENST00000409141 TMEM63AO94886 807 aa17.56■□□□□ 0.4
PDLIM2-206ENST00000409141 SLC35G4P0C7Q5 338 aa17.56■□□□□ 0.4
PDLIM2-206ENST00000409141 JMJD7P0C870 316 aa17.56■□□□□ 0.4
PDLIM2-206ENST00000409141 AMD1P17707 334 aa17.56■□□□□ 0.4
PDLIM2-206ENST00000409141 NMBRP28336 390 aa17.56■□□□□ 0.4
PDLIM2-206ENST00000409141 PPARGP37231 505 aaPredicted RBP17.56■□□□□ 0.4
PDLIM2-206ENST00000409141 PAFAH1B1P43034 410 aa17.56■□□□□ 0.4
PDLIM2-206ENST00000409141 ERVPABLB-1P60509 514 aa17.56■□□□□ 0.4
PDLIM2-206ENST00000409141 TRA2AQ13595 282 aaKnown RBP eCLIP17.56■□□□□ 0.4
PDLIM2-206ENST00000409141 GPR18Q14330 331 aa17.56■□□□□ 0.4
PDLIM2-206ENST00000409141 WDR74Q6RFH5 385 aaPredicted RBP17.56■□□□□ 0.4
PDLIM2-206ENST00000409141 IGF2-ASQ6U949 168 aa17.56■□□□□ 0.4
PDLIM2-206ENST00000409141 CAND1Q86VP6 1230 aaKnown RBP17.56■□□□□ 0.4
PDLIM2-206ENST00000409141 LILRA3Q8N6C8 439 aaPredicted RBP17.56■□□□□ 0.4
PDLIM2-206ENST00000409141 RCBTB1Q8NDN9 531 aa17.56■□□□□ 0.4
PDLIM2-206ENST00000409141 MCUQ8NE86 351 aa17.56■□□□□ 0.4
PDLIM2-206ENST00000409141 INSM2Q96T92 566 aaPredicted RBP17.56■□□□□ 0.4
PDLIM2-206ENST00000409141 ASCL3Q9NQ33 180 aa17.56■□□□□ 0.4
PDLIM2-206ENST00000409141 THSD1Q9NS62 852 aa17.56■□□□□ 0.4
PDLIM2-206ENST00000409141 TREX1Q9NSU2 369 aa17.56■□□□□ 0.4
PDLIM2-206ENST00000409141 CATSPERZQ9NTU4 200 aa17.56■□□□□ 0.4
PDLIM2-206ENST00000409141 CFAP20Q9Y6A4 193 aaKnown RBP17.56■□□□□ 0.4
PDLIM2-206ENST00000409141 PRSS21Q9Y6M0 314 aa17.56■□□□□ 0.4
PDLIM2-206ENST00000409141 BPTFQ12830 3046 aa17.56■□□□□ 0.4
PDLIM2-206ENST00000409141 QSOX1O00391 747 aa17.56■□□□□ 0.4
PDLIM2-206ENST00000409141 HGSO14964 777 aaPredicted RBP17.56■□□□□ 0.4
PDLIM2-206ENST00000409141 OR1I1O60431 355 aa17.56■□□□□ 0.4
PDLIM2-206ENST00000409141 UBXN7O94888 489 aa17.56■□□□□ 0.4
PDLIM2-206ENST00000409141 MLNP12872 115 aa17.56■□□□□ 0.4
PDLIM2-206ENST00000409141 TYRP1P17643 537 aa17.56■□□□□ 0.4
PDLIM2-206ENST00000409141 C16orf72Q14CZ0 275 aa17.56■□□□□ 0.4
PDLIM2-206ENST00000409141 AARS2Q5JTZ9 985 aaKnown RBP17.56■□□□□ 0.4
PDLIM2-206ENST00000409141 SNAP47Q5SQN1 464 aa17.56■□□□□ 0.4
PDLIM2-206ENST00000409141 CASC4Q6P4E1 433 aa17.56■□□□□ 0.4
PDLIM2-206ENST00000409141 ZNF449Q6P9G9 518 aa17.56■□□□□ 0.4
PDLIM2-206ENST00000409141 CES3Q6UWW8 571 aa17.56■□□□□ 0.4
PDLIM2-206ENST00000409141 PACS1Q6VY07 963 aa17.56■□□□□ 0.4
PDLIM2-206ENST00000409141 KLHL7Q8IXQ5 586 aa17.56■□□□□ 0.4
PDLIM2-206ENST00000409141 SPDYE1Q8NFV5 336 aaPredicted RBP17.56■□□□□ 0.4
PDLIM2-206ENST00000409141 C12orf66Q96MD2 445 aa17.56■□□□□ 0.4
PDLIM2-206ENST00000409141 DCBLD2Q96PD2 775 aa17.56■□□□□ 0.4
PDLIM2-206ENST00000409141 MRM3Q9HC36 420 aaKnown RBP17.56■□□□□ 0.4
PDLIM2-206ENST00000409141 XAB2Q9HCS7 855 aaKnown RBP17.56■□□□□ 0.4
PDLIM2-206ENST00000409141 PISDQ9UG56 409 aa17.56■□□□□ 0.4
PDLIM2-206ENST00000409141 ASIC3Q9UHC3 531 aa17.56■□□□□ 0.4
PDLIM2-206ENST00000409141 PCYOX1Q9UHG3 505 aa17.56■□□□□ 0.4
PDLIM2-206ENST00000409141 SOX13Q9UN79 622 aa17.56■□□□□ 0.4
PDLIM2-206ENST00000409141 KMT2BQ9UMN6 2715 aaPredicted RBP17.55■□□□□ 0.4
PDLIM2-206ENST00000409141 CD3EAPO15446 510 aaKnown RBP17.55■□□□□ 0.4
PDLIM2-206ENST00000409141 ITGA2BP08514 1039 aa17.55■□□□□ 0.4
PDLIM2-206ENST00000409141 GSTM1P09488 218 aa17.55■□□□□ 0.4
PDLIM2-206ENST00000409141 OR56A5P0C7T3 313 aa17.55■□□□□ 0.4
PDLIM2-206ENST00000409141 THRAP10827 490 aa17.55■□□□□ 0.4
PDLIM2-206ENST00000409141 MTHFD1P11586 935 aaKnown RBP17.55■□□□□ 0.4
PDLIM2-206ENST00000409141 MLLT3P42568 568 aaPredicted RBP17.55■□□□□ 0.4
PDLIM2-206ENST00000409141 GSTM4Q03013 218 aa17.55■□□□□ 0.4
PDLIM2-206ENST00000409141 SEMA3AQ14563 771 aa17.55■□□□□ 0.4
PDLIM2-206ENST00000409141 XKR5Q6UX68 686 aa17.55■□□□□ 0.4
PDLIM2-206ENST00000409141 PPIL6Q8IXY8 311 aa17.55■□□□□ 0.4
PDLIM2-206ENST00000409141 SNIP1Q8TAD8 396 aaKnown RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms