RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 ERAL1O75616 437 aaKnown RBP8.97□□□□□ -0.97
LIG4-202ENST00000405925 CLDN9O95484 217 aa8.97□□□□□ -0.97
LIG4-202ENST00000405925 SRPRAP08240 638 aaKnown RBP8.97□□□□□ -0.97
LIG4-202ENST00000405925 HMGCLP35914 325 aa8.97□□□□□ -0.97
LIG4-202ENST00000405925 SSR2P43308 183 aa8.97□□□□□ -0.97
LIG4-202ENST00000405925 SOX9P48436 509 aa8.97□□□□□ -0.97
LIG4-202ENST00000405925 PEX6Q13608 980 aa8.97□□□□□ -0.97
LIG4-202ENST00000405925 PHKG1Q16816 387 aa8.97□□□□□ -0.97
LIG4-202ENST00000405925 KLHL35Q6PF15 583 aa8.97□□□□□ -0.97
LIG4-202ENST00000405925 ZNF438Q7Z4V0 828 aa8.97□□□□□ -0.97
LIG4-202ENST00000405925 DEFB119Q8N690 84 aa8.97□□□□□ -0.97
LIG4-202ENST00000405925 ZNF655Q8N720 491 aaPredicted RBP8.97□□□□□ -0.97
LIG4-202ENST00000405925 RERGQ96A58 199 aaPredicted RBP8.97□□□□□ -0.97
LIG4-202ENST00000405925 ANLNQ9NQW6 1124 aa8.97□□□□□ -0.97
LIG4-202ENST00000405925 POLR3HQ9Y535 204 aaPredicted RBP8.97□□□□□ -0.97
LIG4-202ENST00000405925 SPO11Q9Y5K1 396 aa8.97□□□□□ -0.97
LIG4-202ENST00000405925 COLEC10Q9Y6Z7 277 aa8.97□□□□□ -0.97
LIG4-202ENST00000405925 CAPN8A6NHC0 703 aa8.96□□□□□ -0.97
LIG4-202ENST00000405925 ECI2O75521 394 aa8.96□□□□□ -0.97
LIG4-202ENST00000405925 ADH1BP00325 375 aa8.96□□□□□ -0.97
LIG4-202ENST00000405925 SERPINA6P08185 405 aa8.96□□□□□ -0.97
LIG4-202ENST00000405925 HOXD9P28356 352 aaPredicted RBP8.96□□□□□ -0.97
LIG4-202ENST00000405925 PRKAG1P54619 331 aa8.96□□□□□ -0.97
LIG4-202ENST00000405925 DAB2P98082 770 aa8.96□□□□□ -0.97
LIG4-202ENST00000405925 LRRC32Q14392 662 aa8.96□□□□□ -0.97
LIG4-202ENST00000405925 AAK1Q2M2I8 961 aa8.96□□□□□ -0.97
LIG4-202ENST00000405925 TANGO2Q6ICL3 276 aa8.96□□□□□ -0.97
LIG4-202ENST00000405925 PSAPL1Q6NUJ1 521 aa8.96□□□□□ -0.97
LIG4-202ENST00000405925 CYP2R1Q6VVX0 501 aa8.96□□□□□ -0.97
LIG4-202ENST00000405925 PAGE2Q7Z2X7 111 aa8.96□□□□□ -0.97
LIG4-202ENST00000405925 NPAS3Q8IXF0 933 aa8.96□□□□□ -0.97
LIG4-202ENST00000405925 KCTD14Q9BQ13 255 aaPredicted RBP8.96□□□□□ -0.97
LIG4-202ENST00000405925 HPS4Q9NQG7 708 aa8.96□□□□□ -0.97
LIG4-202ENST00000405925 DNAJC28Q9NX36 388 aa8.96□□□□□ -0.97
LIG4-202ENST00000405925 PSME2Q9UL46 239 aa8.96□□□□□ -0.97
LIG4-202ENST00000405925 SCN1AP35498 2009 aa8.96□□□□□ -0.97
LIG4-202ENST00000405925 A8MT66 165 aa8.96□□□□□ -0.97
LIG4-202ENST00000405925 MID1O15344 667 aa8.96□□□□□ -0.97
LIG4-202ENST00000405925 ZSCAN9O15535 394 aaPredicted RBP8.96□□□□□ -0.97
LIG4-202ENST00000405925 GUCY1B2O75343 617 aa8.96□□□□□ -0.97
LIG4-202ENST00000405925 COX4I1P13073 169 aa8.96□□□□□ -0.97
LIG4-202ENST00000405925 PREPP48147 710 aa8.96□□□□□ -0.97
LIG4-202ENST00000405925 DHPSP49366 369 aaPredicted RBP8.96□□□□□ -0.97
LIG4-202ENST00000405925 BLKP51451 505 aa8.96□□□□□ -0.97
LIG4-202ENST00000405925 TMEM115Q12893 351 aaPredicted RBP8.96□□□□□ -0.97
LIG4-202ENST00000405925 TAZQ16635 292 aa8.96□□□□□ -0.97
LIG4-202ENST00000405925 KBTBD6Q86V97 674 aa8.96□□□□□ -0.97
LIG4-202ENST00000405925 HEATR4Q86WZ0 1026 aa8.96□□□□□ -0.97
LIG4-202ENST00000405925 DNAJB14Q8TBM8 379 aa8.96□□□□□ -0.97
LIG4-202ENST00000405925 FIG4Q92562 907 aa8.96□□□□□ -0.97
LIG4-202ENST00000405925 PEX13Q92968 403 aa8.96□□□□□ -0.97
LIG4-202ENST00000405925 NSMCE2Q96MF7 247 aa8.96□□□□□ -0.97
LIG4-202ENST00000405925 PRICKLE1Q96MT3 831 aaPredicted RBP8.96□□□□□ -0.97
LIG4-202ENST00000405925 MOCS1Q9NZB8 636 aa8.96□□□□□ -0.97
LIG4-202ENST00000405925 SCOCQ9UIL1 159 aa8.96□□□□□ -0.97
LIG4-202ENST00000405925 ITM2BQ9Y287 266 aa8.96□□□□□ -0.97
LIG4-202ENST00000405925 SNX13Q9Y5W8 968 aa8.96□□□□□ -0.97
LIG4-202ENST00000405925 A0A1W2PQU0 124 aa8.96□□□□□ -0.98
LIG4-202ENST00000405925 TCRBV21S2A2A0A5A6 115 aa8.96□□□□□ -0.98
LIG4-202ENST00000405925 RGSL1A5PLK6 1076 aa8.96□□□□□ -0.98
LIG4-202ENST00000405925 DLX3O60479 287 aa8.96□□□□□ -0.98
LIG4-202ENST00000405925 CD72P21854 359 aa8.96□□□□□ -0.98
LIG4-202ENST00000405925 ME2P23368 584 aa8.96□□□□□ -0.98
LIG4-202ENST00000405925 SGSHP51688 502 aa8.96□□□□□ -0.98
LIG4-202ENST00000405925 ARF5P84085 180 aa8.96□□□□□ -0.98
LIG4-202ENST00000405925 ZNF234Q14588 700 aa8.96□□□□□ -0.98
LIG4-202ENST00000405925 CST6Q15828 149 aa8.96□□□□□ -0.98
LIG4-202ENST00000405925 HORMAD1Q86X24 394 aa8.96□□□□□ -0.98
LIG4-202ENST00000405925 PLD6Q8N2A8 252 aaKnown RBP8.96□□□□□ -0.98
LIG4-202ENST00000405925 FAM46DQ8NEK8 389 aa8.96□□□□□ -0.98
LIG4-202ENST00000405925 STARD8Q92502 1023 aa8.96□□□□□ -0.98
LIG4-202ENST00000405925 KCNJ9Q92806 393 aa8.96□□□□□ -0.98
LIG4-202ENST00000405925 RCN3Q96D15 328 aa8.96□□□□□ -0.98
LIG4-202ENST00000405925 VPS50Q96JG6 964 aa8.96□□□□□ -0.98
LIG4-202ENST00000405925 CAAP1Q9H8G2 361 aa8.96□□□□□ -0.98
LIG4-202ENST00000405925 ZNF395Q9H8N7 513 aaPredicted RBP8.96□□□□□ -0.98
LIG4-202ENST00000405925 WASH3PC4AMC7 463 aa8.95□□□□□ -0.98
LIG4-202ENST00000405925 C9JVG2 144 aa8.95□□□□□ -0.98
LIG4-202ENST00000405925 UNC5CO95185 931 aa8.95□□□□□ -0.98
LIG4-202ENST00000405925 GNAZP19086 355 aa8.95□□□□□ -0.98
LIG4-202ENST00000405925 PIK3R1P27986 724 aa8.95□□□□□ -0.98
LIG4-202ENST00000405925 CCR3P51677 355 aa8.95□□□□□ -0.98
LIG4-202ENST00000405925 HK2P52789 917 aa8.95□□□□□ -0.98
LIG4-202ENST00000405925 FBXW4P57775 412 aa8.95□□□□□ -0.98
LIG4-202ENST00000405925 NCALDP61601 193 aa8.95□□□□□ -0.98
LIG4-202ENST00000405925 NKX3-2P78367 333 aa8.95□□□□□ -0.98
LIG4-202ENST00000405925 TRMT5Q32P41 509 aaKnown RBP8.95□□□□□ -0.98
LIG4-202ENST00000405925 UBAP2Q5T6F2 1119 aaKnown RBP8.95□□□□□ -0.98
LIG4-202ENST00000405925 KDELC1Q6UW63 502 aa8.95□□□□□ -0.98
LIG4-202ENST00000405925 GPR180Q86V85 440 aa8.95□□□□□ -0.98
LIG4-202ENST00000405925 GPR65Q8IYL9 337 aa8.95□□□□□ -0.98
LIG4-202ENST00000405925 TMEM132CQ8N3T6 1108 aa8.95□□□□□ -0.98
LIG4-202ENST00000405925 GLYATL1Q969I3 302 aa8.95□□□□□ -0.98
LIG4-202ENST00000405925 RAB7BQ96AH8 199 aa8.95□□□□□ -0.98
LIG4-202ENST00000405925 SCRN2Q96FV2 425 aa8.95□□□□□ -0.98
LIG4-202ENST00000405925 SEPHS2Q99611 448 aa8.95□□□□□ -0.98
LIG4-202ENST00000405925 CCM2Q9BSQ5 444 aa8.95□□□□□ -0.98
LIG4-202ENST00000405925 LRTM1Q9HBL6 345 aa8.95□□□□□ -0.98
LIG4-202ENST00000405925 AKAP7Q9P0M2 348 aaPredicted RBP8.95□□□□□ -0.98
LIG4-202ENST00000405925 CYP8B1Q9UNU6 501 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms