RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 RAET1GQ6H3X3 334 aa20.68■□□□□ 0.9
TPM1-208ENST00000404484 ADAMTSL2Q86TH1 951 aa20.68■□□□□ 0.9
TPM1-208ENST00000404484 ALYREFQ86V81 257 aaKnown RBP20.68■□□□□ 0.9
TPM1-208ENST00000404484 KBTBD6Q86V97 674 aa20.68■□□□□ 0.9
TPM1-208ENST00000404484 ATOH8Q96SQ7 321 aa20.68■□□□□ 0.9
TPM1-208ENST00000404484 DRC3Q9H069 523 aa20.68■□□□□ 0.9
TPM1-208ENST00000404484 NPHS2Q9NP85 383 aa20.68■□□□□ 0.9
TPM1-208ENST00000404484 FZD4Q9ULV1 537 aa20.68■□□□□ 0.9
TPM1-208ENST00000404484 FAM186AA6NE01 2351 aa20.68■□□□□ 0.9
TPM1-208ENST00000404484 A8MT66 165 aa20.68■□□□□ 0.9
TPM1-208ENST00000404484 ITGB6P18564 788 aa20.68■□□□□ 0.9
TPM1-208ENST00000404484 NAGLUP54802 743 aa20.68■□□□□ 0.9
TPM1-208ENST00000404484 OVGP1Q12889 678 aa20.68■□□□□ 0.9
TPM1-208ENST00000404484 RCN2Q14257 317 aa20.68■□□□□ 0.9
TPM1-208ENST00000404484 AGERQ15109 404 aa20.68■□□□□ 0.9
TPM1-208ENST00000404484 OR4D1Q15615 310 aa20.68■□□□□ 0.9
TPM1-208ENST00000404484 KIAA1161Q6NSJ0 714 aa20.68■□□□□ 0.9
TPM1-208ENST00000404484 USP30Q70CQ3 517 aa20.68■□□□□ 0.9
TPM1-208ENST00000404484 LONP2Q86WA8 852 aa20.68■□□□□ 0.9
TPM1-208ENST00000404484 LKAAEAR1Q8TD35 194 aa20.68■□□□□ 0.9
TPM1-208ENST00000404484 SIPA1Q96FS4 1042 aa20.68■□□□□ 0.9
TPM1-208ENST00000404484 NCKAP1Q9Y2A7 1128 aa20.68■□□□□ 0.9
TPM1-208ENST00000404484 FRYLO94915 3013 aa20.67■□□□□ 0.9
TPM1-208ENST00000404484 LRRK1Q38SD2 2015 aa20.67■□□□□ 0.9
TPM1-208ENST00000404484 HRO43593 1189 aa20.67■□□□□ 0.9
TPM1-208ENST00000404484 NAA20P61599 178 aa20.67■□□□□ 0.9
TPM1-208ENST00000404484 RPS21P63220 83 aaKnown RBP20.67■□□□□ 0.9
TPM1-208ENST00000404484 TSNQ15631 228 aaKnown RBP20.67■□□□□ 0.9
TPM1-208ENST00000404484 ASCL5Q7RTU5 278 aa20.67■□□□□ 0.9
TPM1-208ENST00000404484 WDR75Q8IWA0 830 aaKnown RBP20.67■□□□□ 0.9
TPM1-208ENST00000404484 PIWIL2Q8TC59 973 aaKnown RBP20.67■□□□□ 0.9
TPM1-208ENST00000404484 CNDP1Q96KN2 507 aa20.67■□□□□ 0.9
TPM1-208ENST00000404484 CD248Q9HCU0 757 aa20.67■□□□□ 0.9
TPM1-208ENST00000404484 SERGEFQ9UGK8 458 aa20.67■□□□□ 0.9
TPM1-208ENST00000404484 USH1CQ9Y6N9 552 aa20.67■□□□□ 0.9
TPM1-208ENST00000404484 PIKFYVEQ9Y2I7 2098 aa20.66■□□□□ 0.9
TPM1-208ENST00000404484 NPEPPSL1A6NEC2 478 aa20.66■□□□□ 0.9
TPM1-208ENST00000404484 PLRG1O43660 514 aaKnown RBP20.66■□□□□ 0.9
TPM1-208ENST00000404484 ITM2AO43736 263 aa20.66■□□□□ 0.9
TPM1-208ENST00000404484 APBB3O95704 486 aa20.66■□□□□ 0.9
TPM1-208ENST00000404484 SOD1P00441 154 aa20.66■□□□□ 0.9
TPM1-208ENST00000404484 ACADMP11310 421 aa20.66■□□□□ 0.9
TPM1-208ENST00000404484 HK2P52789 917 aa20.66■□□□□ 0.9
TPM1-208ENST00000404484 SRSF5Q13243 272 aaKnown RBP20.66■□□□□ 0.9
TPM1-208ENST00000404484 PLEKHS1Q5SXH7 462 aa20.66■□□□□ 0.9
TPM1-208ENST00000404484 ADAMTSL4Q6UY14 1074 aa20.66■□□□□ 0.9
TPM1-208ENST00000404484 NAPRTQ6XQN6 538 aa20.66■□□□□ 0.9
TPM1-208ENST00000404484 DET1Q7L5Y6 550 aa20.66■□□□□ 0.9
TPM1-208ENST00000404484 WDR5BQ86VZ2 330 aa20.66■□□□□ 0.9
TPM1-208ENST00000404484 KIRREL3Q8IZU9 778 aa20.66■□□□□ 0.9
TPM1-208ENST00000404484 CCNYL1Q8N7R7 359 aa20.66■□□□□ 0.9
TPM1-208ENST00000404484 TSTD1Q8NFU3 115 aa20.66■□□□□ 0.9
TPM1-208ENST00000404484 FUBP1Q96AE4 644 aaKnown RBP20.66■□□□□ 0.9
TPM1-208ENST00000404484 L3HYPDHQ96EM0 354 aa20.66■□□□□ 0.9
TPM1-208ENST00000404484 TRMOQ9BU70 441 aa20.66■□□□□ 0.9
TPM1-208ENST00000404484 C1QTNF7Q9BXJ2 289 aa20.66■□□□□ 0.9
TPM1-208ENST00000404484 PREBQ9HCU5 417 aa20.66■□□□□ 0.9
TPM1-208ENST00000404484 EBF1Q9UH73 591 aa20.66■□□□□ 0.9
TPM1-208ENST00000404484 OTOGLQ3ZCN5 2332 aa20.66■□□□□ 0.9
TPM1-208ENST00000404484 CCDC163A0A0D9SF12 145 aa20.65■□□□□ 0.9
TPM1-208ENST00000404484 IGLON5A6NGN9 336 aa20.65■□□□□ 0.9
TPM1-208ENST00000404484 SUPT3HB4E1H0 165 aa20.65■□□□□ 0.9
TPM1-208ENST00000404484 CDC7O00311 574 aa20.65■□□□□ 0.9
TPM1-208ENST00000404484 SUPT3HO75486 399 aa20.65■□□□□ 0.9
TPM1-208ENST00000404484 GFAPP14136 432 aa20.65■□□□□ 0.9
TPM1-208ENST00000404484 IMPDH1P20839 514 aa20.65■□□□□ 0.9
TPM1-208ENST00000404484 AOAHP28039 575 aa20.65■□□□□ 0.9
TPM1-208ENST00000404484 TEAD1P28347 426 aa20.65■□□□□ 0.9
TPM1-208ENST00000404484 DGKEP52429 567 aa20.65■□□□□ 0.9
TPM1-208ENST00000404484 TMEM115Q12893 351 aaPredicted RBP20.65■□□□□ 0.9
TPM1-208ENST00000404484 GTF2H3Q13889 308 aa20.65■□□□□ 0.9
TPM1-208ENST00000404484 NEK5Q6P3R8 708 aa20.65■□□□□ 0.9
TPM1-208ENST00000404484 GPSM1Q86YR5 675 aa20.65■□□□□ 0.9
TPM1-208ENST00000404484 SUMF1Q8NBK3 374 aa20.65■□□□□ 0.9
TPM1-208ENST00000404484 C10orf82Q8WW14 230 aa20.65■□□□□ 0.9
TPM1-208ENST00000404484 EXT2Q93063 718 aa20.65■□□□□ 0.9
TPM1-208ENST00000404484 ZNF514Q96K75 400 aaPredicted RBP20.65■□□□□ 0.9
TPM1-208ENST00000404484 SORT1Q99523 831 aa20.65■□□□□ 0.9
TPM1-208ENST00000404484 ILKAPQ9H0C8 392 aaPredicted RBP20.65■□□□□ 0.9
TPM1-208ENST00000404484 CYP4F12Q9HCS2 524 aa20.65■□□□□ 0.9
TPM1-208ENST00000404484 KCNK4Q9NYG8 393 aa20.65■□□□□ 0.9
TPM1-208ENST00000404484 CNOT6Q9ULM6 557 aaKnown RBP20.65■□□□□ 0.9
TPM1-208ENST00000404484 DNAJC16Q9Y2G8 782 aa20.65■□□□□ 0.9
TPM1-208ENST00000404484 PRR23AA6NEV1 266 aa20.64■□□□□ 0.9
TPM1-208ENST00000404484 NEMP2A6NFY4 417 aa20.64■□□□□ 0.9
TPM1-208ENST00000404484 UBXN8O00124 270 aa20.64■□□□□ 0.9
TPM1-208ENST00000404484 INPP4BO15327 924 aa20.64■□□□□ 0.9
TPM1-208ENST00000404484 MTX2O75431 263 aa20.64■□□□□ 0.9
TPM1-208ENST00000404484 LYPLA1O75608 230 aaPredicted RBP20.64■□□□□ 0.9
TPM1-208ENST00000404484 LMNAP02545 664 aaKnown RBP20.64■□□□□ 0.9
TPM1-208ENST00000404484 GSTM1P09488 218 aa20.64■□□□□ 0.9
TPM1-208ENST00000404484 KCNC1P48547 511 aa20.64■□□□□ 0.9
TPM1-208ENST00000404484 PRLHRP49683 370 aa20.64■□□□□ 0.9
TPM1-208ENST00000404484 HERVK_113P63132 956 aa20.64■□□□□ 0.9
TPM1-208ENST00000404484 GSTM4Q03013 218 aa20.64■□□□□ 0.9
TPM1-208ENST00000404484 SF3A3Q12874 501 aaKnown RBP eCLIP20.64■□□□□ 0.99e-9■■■■□ 23.4
TPM1-208ENST00000404484 PRKAA1Q13131 559 aa20.64■□□□□ 0.9
TPM1-208ENST00000404484 MAP7D1Q3KQU3 841 aa20.64■□□□□ 0.9
TPM1-208ENST00000404484 ACSBG2Q5FVE4 666 aa20.64■□□□□ 0.9
TPM1-208ENST00000404484 FRA10AC1Q70Z53 315 aa20.64■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms