RNA–Protein interactions for RNA: ENST00000403136.1

CEACAM1-206, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-206ENST00000403136 PPP1R3AQ16821 1122 aa13.07□□□□□ -0.32
CEACAM1-206ENST00000403136 RAET1GQ6H3X3 334 aa13.07□□□□□ -0.32
CEACAM1-206ENST00000403136 TMEM220Q6QAJ8 160 aa13.07□□□□□ -0.32
CEACAM1-206ENST00000403136 FRA10AC1Q70Z53 315 aa13.07□□□□□ -0.32
CEACAM1-206ENST00000403136 TMPRSS6Q8IU80 811 aa13.07□□□□□ -0.32
CEACAM1-206ENST00000403136 KIRREL3Q8IZU9 778 aa13.07□□□□□ -0.32
CEACAM1-206ENST00000403136 BEND7Q8N7W2 519 aaPredicted RBP13.07□□□□□ -0.32
CEACAM1-206ENST00000403136 FAR2Q96K12 515 aa13.07□□□□□ -0.32
CEACAM1-206ENST00000403136 EPHX3Q9H6B9 360 aa13.07□□□□□ -0.32
CEACAM1-206ENST00000403136 TNFRSF12AQ9NP84 129 aa13.07□□□□□ -0.32
CEACAM1-206ENST00000403136 FBXL12Q9NXK8 326 aa13.07□□□□□ -0.32
CEACAM1-206ENST00000403136 TRAF6Q9Y4K3 522 aa13.07□□□□□ -0.32
CEACAM1-206ENST00000403136 OARD1Q9Y530 152 aa13.07□□□□□ -0.32
CEACAM1-206ENST00000403136 PLXNB3Q9ULL4 1909 aa13.07□□□□□ -0.32
CEACAM1-206ENST00000403136 TMEM233B4DJY2 109 aa13.07□□□□□ -0.32
CEACAM1-206ENST00000403136 PPP6CO00743 305 aa13.07□□□□□ -0.32
CEACAM1-206ENST00000403136 FFAR2O15552 330 aa13.07□□□□□ -0.32
CEACAM1-206ENST00000403136 NARSO43776 548 aaKnown RBP13.07□□□□□ -0.32
CEACAM1-206ENST00000403136 GPC4O75487 556 aa13.07□□□□□ -0.32
CEACAM1-206ENST00000403136 ATP5HO75947 161 aa13.07□□□□□ -0.32
CEACAM1-206ENST00000403136 CDK14O94921 469 aa13.07□□□□□ -0.32
CEACAM1-206ENST00000403136 DNTTP04053 509 aa13.07□□□□□ -0.32
CEACAM1-206ENST00000403136 FGF4P08620 206 aa13.07□□□□□ -0.32
CEACAM1-206ENST00000403136 RPS17P08708 135 aaKnown RBP13.07□□□□□ -0.32
CEACAM1-206ENST00000403136 MPC1LP0DKB6 136 aa13.07□□□□□ -0.32
CEACAM1-206ENST00000403136 T-ENOLP0DO92 83 aa13.07□□□□□ -0.32
CEACAM1-206ENST00000403136 COL9A1P20849 921 aa13.07□□□□□ -0.32
CEACAM1-206ENST00000403136 AGTR2P50052 363 aa13.07□□□□□ -0.32
CEACAM1-206ENST00000403136 SH3BP2P78314 561 aa13.07□□□□□ -0.32
CEACAM1-206ENST00000403136 CLCQ05315 142 aa13.07□□□□□ -0.32
CEACAM1-206ENST00000403136 FBXO48Q5FWF7 155 aa13.07□□□□□ -0.32
CEACAM1-206ENST00000403136 METTL21CQ5VZV1 264 aa13.07□□□□□ -0.32
CEACAM1-206ENST00000403136 FAM91A1Q658Y4 838 aa13.07□□□□□ -0.32
CEACAM1-206ENST00000403136 AFAP1L2Q8N4X5 818 aa13.07□□□□□ -0.32
CEACAM1-206ENST00000403136 TRPC4APQ8TEL6 797 aa13.07□□□□□ -0.32
CEACAM1-206ENST00000403136 GANCQ8TET4 914 aa13.07□□□□□ -0.32
CEACAM1-206ENST00000403136 ASZ1Q8WWH4 475 aa13.07□□□□□ -0.32
CEACAM1-206ENST00000403136 STON2Q8WXE9 905 aa13.07□□□□□ -0.32
CEACAM1-206ENST00000403136 PPM1EQ8WY54 764 aa13.07□□□□□ -0.32
CEACAM1-206ENST00000403136 ELMO1Q92556 727 aa13.07□□□□□ -0.32
CEACAM1-206ENST00000403136 DLG3Q92796 817 aa13.07□□□□□ -0.32
CEACAM1-206ENST00000403136 HLA-CQ95604 372 aa13.07□□□□□ -0.32
CEACAM1-206ENST00000403136 PRR11Q96HE9 360 aaPredicted RBP13.07□□□□□ -0.32
CEACAM1-206ENST00000403136 NSUN5Q96P11 429 aaKnown RBP13.07□□□□□ -0.32
CEACAM1-206ENST00000403136 TUBB6Q9BUF5 446 aa13.07□□□□□ -0.32
CEACAM1-206ENST00000403136 NUF2Q9BZD4 464 aa13.07□□□□□ -0.32
CEACAM1-206ENST00000403136 RDH14Q9HBH5 336 aa13.07□□□□□ -0.32
CEACAM1-206ENST00000403136 TRIM39Q9HCM9 518 aa13.07□□□□□ -0.32
CEACAM1-206ENST00000403136 SORCS3Q9UPU3 1222 aa13.07□□□□□ -0.32
CEACAM1-206ENST00000403136 PIKFYVEQ9Y2I7 2098 aa13.06□□□□□ -0.32
CEACAM1-206ENST00000403136 SHISA7A6NL88 538 aa13.06□□□□□ -0.32
CEACAM1-206ENST00000403136 ATG13O75143 517 aa13.06□□□□□ -0.32
CEACAM1-206ENST00000403136 UNC5CO95185 931 aa13.06□□□□□ -0.32
CEACAM1-206ENST00000403136 S100BP04271 92 aaPredicted RBP13.06□□□□□ -0.32
CEACAM1-206ENST00000403136 PRLHRP49683 370 aa13.06□□□□□ -0.32
CEACAM1-206ENST00000403136 BOP1Q14137 746 aaKnown RBP13.06□□□□□ -0.32
CEACAM1-206ENST00000403136 KRT72Q14CN4 511 aa13.06□□□□□ -0.32
CEACAM1-206ENST00000403136 AGERQ15109 404 aa13.06□□□□□ -0.32
CEACAM1-206ENST00000403136 PCBP2Q15366 365 aaKnown RBP eCLIP13.06□□□□□ -0.32
CEACAM1-206ENST00000403136 SMAD2Q15796 467 aaKnown RBP13.06□□□□□ -0.32
CEACAM1-206ENST00000403136 PHKG1Q16816 387 aa13.06□□□□□ -0.32
CEACAM1-206ENST00000403136 SLC44A4Q53GD3 710 aa13.06□□□□□ -0.32
CEACAM1-206ENST00000403136 ADGRG6Q86SQ4 1221 aa13.06□□□□□ -0.32
CEACAM1-206ENST00000403136 VRK3Q8IV63 474 aa13.06□□□□□ -0.32
CEACAM1-206ENST00000403136 CLYBLQ8N0X4 340 aa13.06□□□□□ -0.32
CEACAM1-206ENST00000403136 PDPRQ8NCN5 879 aa13.06□□□□□ -0.32
CEACAM1-206ENST00000403136 ZNF483Q8TF39 744 aaPredicted RBP13.06□□□□□ -0.32
CEACAM1-206ENST00000403136 ESAMQ96AP7 390 aa13.06□□□□□ -0.32
CEACAM1-206ENST00000403136 FAM131CQ96AQ9 280 aa13.06□□□□□ -0.32
CEACAM1-206ENST00000403136 OR52B2Q96RD2 323 aa13.06□□□□□ -0.32
CEACAM1-206ENST00000403136 CDX2Q99626 313 aaPredicted RBP13.06□□□□□ -0.32
CEACAM1-206ENST00000403136 CCM2Q9BSQ5 444 aa13.06□□□□□ -0.32
CEACAM1-206ENST00000403136 WDR55Q9H6Y2 383 aaPredicted RBP13.06□□□□□ -0.32
CEACAM1-206ENST00000403136 CD248Q9HCU0 757 aa13.06□□□□□ -0.32
CEACAM1-206ENST00000403136 TXLNGQ9NUQ3 528 aa13.06□□□□□ -0.32
CEACAM1-206ENST00000403136 PTBP2Q9UKA9 531 aaKnown RBP13.06□□□□□ -0.32
CEACAM1-206ENST00000403136 CDYLQ9Y232 598 aa13.06□□□□□ -0.32
CEACAM1-206ENST00000403136 TNPO3Q9Y5L0 923 aaKnown RBP13.06□□□□□ -0.32
CEACAM1-206ENST00000403136 PLXNA2O75051 1894 aa13.06□□□□□ -0.32
CEACAM1-206ENST00000403136 ATG2BQ96BY7 2078 aa13.06□□□□□ -0.32
CEACAM1-206ENST00000403136 TRPC5OSA6NMA1 111 aa13.05□□□□□ -0.32
CEACAM1-206ENST00000403136 SLCO2B1O94956 709 aa13.05□□□□□ -0.32
CEACAM1-206ENST00000403136 FSBPO95073 299 aa13.05□□□□□ -0.32
CEACAM1-206ENST00000403136 GUCA1CO95843 209 aa13.05□□□□□ -0.32
CEACAM1-206ENST00000403136 VCLP18206 1134 aa13.05□□□□□ -0.32
CEACAM1-206ENST00000403136 NCALDP61601 193 aa13.05□□□□□ -0.32
CEACAM1-206ENST00000403136 LCP2Q13094 533 aa13.05□□□□□ -0.32
CEACAM1-206ENST00000403136 PDCD2Q16342 344 aaPredicted RBP13.05□□□□□ -0.32
CEACAM1-206ENST00000403136 WSCD2Q2TBF2 565 aa13.05□□□□□ -0.32
CEACAM1-206ENST00000403136 FBXO43Q4G163 708 aa13.05□□□□□ -0.32
CEACAM1-206ENST00000403136 PNCKQ6P2M8 343 aa13.05□□□□□ -0.32
CEACAM1-206ENST00000403136 ADAMTSL4Q6UY14 1074 aa13.05□□□□□ -0.32
CEACAM1-206ENST00000403136 NEK10Q6ZWH5 1172 aa13.05□□□□□ -0.32
CEACAM1-206ENST00000403136 TRIM74Q86UV6 250 aa13.05□□□□□ -0.32
CEACAM1-206ENST00000403136 PLA2G15Q8NCC3 412 aa13.05□□□□□ -0.32
CEACAM1-206ENST00000403136 ASB11Q8WXH4 323 aa13.05□□□□□ -0.32
CEACAM1-206ENST00000403136 FAM3CQ92520 227 aa13.05□□□□□ -0.32
CEACAM1-206ENST00000403136 MSANTD3Q96H12 275 aa13.05□□□□□ -0.32
CEACAM1-206ENST00000403136 NSL1Q96IY1 281 aa13.05□□□□□ -0.32
CEACAM1-206ENST00000403136 HGH1Q9BTY7 390 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms