RNA–Protein interactions for RNA: ENST00000399606.5

CACNA1C-210, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-210ENST00000399606 SPIBQ01892 262 aa10.86□□□□□ -0.67
CACNA1C-210ENST00000399606 CBLBQ13191 982 aa10.86□□□□□ -0.67
CACNA1C-210ENST00000399606 AADACL4Q5VUY2 407 aa10.86□□□□□ -0.67
CACNA1C-210ENST00000399606 ZNF776Q68DI1 518 aaPredicted RBP10.86□□□□□ -0.67
CACNA1C-210ENST00000399606 TMEM220Q6QAJ8 160 aa10.86□□□□□ -0.67
CACNA1C-210ENST00000399606 UNC93AQ86WB7 457 aa10.86□□□□□ -0.67
CACNA1C-210ENST00000399606 TCAIMQ8N3R3 496 aa10.86□□□□□ -0.67
CACNA1C-210ENST00000399606 BHLHE22Q8NFJ8 381 aaPredicted RBP10.86□□□□□ -0.67
CACNA1C-210ENST00000399606 WFIKKN2Q8TEU8 576 aa10.86□□□□□ -0.67
CACNA1C-210ENST00000399606 ZNF606Q8WXB4 792 aa10.86□□□□□ -0.67
CACNA1C-210ENST00000399606 EFHD2Q96C19 240 aaPredicted RBP10.86□□□□□ -0.67
CACNA1C-210ENST00000399606 SERPINE1P05121 402 aa10.86□□□□□ -0.67
CACNA1C-210ENST00000399606 ACP5P13686 325 aa10.86□□□□□ -0.67
CACNA1C-210ENST00000399606 RAB4AP20338 218 aa10.86□□□□□ -0.67
CACNA1C-210ENST00000399606 IL12AP29459 219 aa10.86□□□□□ -0.67
CACNA1C-210ENST00000399606 CD40LGP29965 261 aa10.86□□□□□ -0.67
CACNA1C-210ENST00000399606 ARCN1P48444 511 aaKnown RBP10.86□□□□□ -0.67
CACNA1C-210ENST00000399606 RARRES1P49788 294 aa10.86□□□□□ -0.67
CACNA1C-210ENST00000399606 RPL38P63173 70 aaKnown RBP10.86□□□□□ -0.67
CACNA1C-210ENST00000399606 PCDH1Q08174 1060 aa10.86□□□□□ -0.67
CACNA1C-210ENST00000399606 CPSF6Q16630 551 aaKnown RBP eCLIP10.86□□□□□ -0.67
CACNA1C-210ENST00000399606 FKBP1CQ5VVH2 108 aa10.86□□□□□ -0.67
CACNA1C-210ENST00000399606 GALNT18Q6P9A2 607 aa10.86□□□□□ -0.67
CACNA1C-210ENST00000399606 KCNT2Q6UVM3 1135 aa10.86□□□□□ -0.67
CACNA1C-210ENST00000399606 ABHD13Q7L211 337 aa10.86□□□□□ -0.67
CACNA1C-210ENST00000399606 KLRG1Q96E93 195 aa10.86□□□□□ -0.67
CACNA1C-210ENST00000399606 TMLHEQ9NVH6 421 aa10.86□□□□□ -0.67
CACNA1C-210ENST00000399606 SUSD2Q9UGT4 822 aa10.86□□□□□ -0.67
CACNA1C-210ENST00000399606 IRAK3Q9Y616 596 aa10.86□□□□□ -0.67
CACNA1C-210ENST00000399606 TNS2Q63HR2 1409 aa10.86□□□□□ -0.67
CACNA1C-210ENST00000399606 KDM4FA0A1W2PPD8 638 aa10.86□□□□□ -0.67
CACNA1C-210ENST00000399606 PIP5K1CO60331 668 aa10.86□□□□□ -0.67
CACNA1C-210ENST00000399606 SEC24AO95486 1093 aa10.86□□□□□ -0.67
CACNA1C-210ENST00000399606 CYP1A2P05177 515 aa10.86□□□□□ -0.67
CACNA1C-210ENST00000399606 PFKMP08237 780 aa10.86□□□□□ -0.67
CACNA1C-210ENST00000399606 CHN2P52757 468 aa10.86□□□□□ -0.67
CACNA1C-210ENST00000399606 ARSIQ5FYB1 569 aa10.86□□□□□ -0.67
CACNA1C-210ENST00000399606 PAOXQ6QHF9 649 aa10.86□□□□□ -0.67
CACNA1C-210ENST00000399606 NIPA1Q7RTP0 329 aa10.86□□□□□ -0.67
CACNA1C-210ENST00000399606 VSIG10LQ86VR7 867 aa10.86□□□□□ -0.67
CACNA1C-210ENST00000399606 BPIFB6Q8NFQ5 453 aa10.86□□□□□ -0.67
CACNA1C-210ENST00000399606 OR5T1Q8NG75 326 aa10.86□□□□□ -0.67
CACNA1C-210ENST00000399606 KLHL5Q96PQ7 755 aa10.86□□□□□ -0.67
CACNA1C-210ENST00000399606 USP29Q9HBJ7 922 aa10.86□□□□□ -0.67
CACNA1C-210ENST00000399606 PCDHGC3Q9UN70 934 aa10.86□□□□□ -0.67
CACNA1C-210ENST00000399606 TPPPO94811 219 aa10.86□□□□□ -0.67
CACNA1C-210ENST00000399606 POP4O95707 220 aaKnown RBP10.86□□□□□ -0.67
CACNA1C-210ENST00000399606 CA9Q16790 459 aa10.86□□□□□ -0.67
CACNA1C-210ENST00000399606 KBTBD8Q8NFY9 601 aa10.86□□□□□ -0.67
CACNA1C-210ENST00000399606 STAG3L4Q8TBR4 150 aa10.86□□□□□ -0.67
CACNA1C-210ENST00000399606 COQ8BQ96D53 544 aa10.86□□□□□ -0.67
CACNA1C-210ENST00000399606 SDHAF3Q9NRP4 125 aa10.86□□□□□ -0.67
CACNA1C-210ENST00000399606 HPF1Q9NWY4 346 aa10.86□□□□□ -0.67
CACNA1C-210ENST00000399606 CORO2BQ9UQ03 480 aa10.86□□□□□ -0.67
CACNA1C-210ENST00000399606 NAALADL1Q9UQQ1 740 aa10.86□□□□□ -0.67
CACNA1C-210ENST00000399606 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.86□□□□□ -0.67
CACNA1C-210ENST00000399606 ATRNO75882 1429 aa10.86□□□□□ -0.67
CACNA1C-210ENST00000399606 TBX1O43435 398 aa10.86□□□□□ -0.67
CACNA1C-210ENST00000399606 TYRP1P17643 537 aa10.86□□□□□ -0.67
CACNA1C-210ENST00000399606 GRIK5Q16478 980 aa10.86□□□□□ -0.67
CACNA1C-210ENST00000399606 CRY2Q49AN0 593 aa10.86□□□□□ -0.67
CACNA1C-210ENST00000399606 PERM1Q5SV97 790 aa10.86□□□□□ -0.67
CACNA1C-210ENST00000399606 DENND5AQ6IQ26 1287 aa10.86□□□□□ -0.67
CACNA1C-210ENST00000399606 APOBEC3HQ6NTF7 200 aaKnown RBP10.86□□□□□ -0.67
CACNA1C-210ENST00000399606 SCIMPQ6UWF3 145 aa10.86□□□□□ -0.67
CACNA1C-210ENST00000399606 METTL27Q8N6F8 245 aaPredicted RBP10.86□□□□□ -0.67
CACNA1C-210ENST00000399606 FBXO30Q8TB52 745 aa10.86□□□□□ -0.67
CACNA1C-210ENST00000399606 WDR77Q9BQA1 342 aaPredicted RBP10.86□□□□□ -0.67
CACNA1C-210ENST00000399606 SNX3O60493 162 aa10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 ZBTB11O95625 1053 aaPredicted RBP10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 CPN2P22792 545 aa10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 RFC2P35250 354 aa10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 SPAM1P38567 509 aa10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 ZNF135P52742 658 aaPredicted RBP10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 NAB1Q13506 487 aa10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 BMT2Q1RMZ1 405 aa10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 PIGZQ86VD9 579 aa10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 PSMA8Q8TAA3 256 aa10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 EZH1Q92800 747 aaPredicted RBP10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 SLAMF7Q9NQ25 335 aa10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 UCKL1Q9NWZ5 548 aa10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 UPB1Q9UBR1 384 aa10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 GPR89AB7ZAQ6 455 aa10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 EPHB6O15197 1021 aa10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 PAGE1O75459 146 aa10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 FCER2P06734 321 aa10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 GPR89BP0CG08 455 aa10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 DBTP11182 482 aaKnown RBP10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 SRCP12931 536 aa10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 B3GALT6Q96L58 329 aa10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 TBCBQ99426 244 aa10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 GPR174Q9BXC1 333 aa10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 CDC42EP4Q9H3Q1 356 aaKnown RBP10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 OSGEPQ9NPF4 335 aa10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 PRDM8Q9NQV8 689 aa10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 METTL21EPA6NDL7 271 aa10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 SULT1B1O43704 296 aa10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 TMEM11P17152 192 aa10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 CLCNKBP51801 687 aa10.85□□□□□ -0.67
CACNA1C-210ENST00000399606 IL18R1Q13478 541 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms