RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 MC2RQ01718 297 aa13.15□□□□□ -0.3
VCX3A-202ENST00000398729 MSLNQ13421 630 aaPredicted RBP13.15□□□□□ -0.3
VCX3A-202ENST00000398729 GPR18Q14330 331 aa13.15□□□□□ -0.3
VCX3A-202ENST00000398729 SPARCL1Q14515 664 aa13.15□□□□□ -0.3
VCX3A-202ENST00000398729 CLCA4Q14CN2 919 aa13.15□□□□□ -0.3
VCX3A-202ENST00000398729 P3H1Q32P28 736 aa13.15□□□□□ -0.3
VCX3A-202ENST00000398729 FNBP1LQ5T0N5 605 aa13.15□□□□□ -0.3
VCX3A-202ENST00000398729 XKR5Q6UX68 686 aa13.15□□□□□ -0.3
VCX3A-202ENST00000398729 IL22RA1Q8N6P7 574 aa13.15□□□□□ -0.3
VCX3A-202ENST00000398729 OR13C4Q8NGS5 318 aa13.15□□□□□ -0.3
VCX3A-202ENST00000398729 UBE2Q2Q8WVN8 375 aa13.15□□□□□ -0.3
VCX3A-202ENST00000398729 JPH3Q8WXH2 748 aaPredicted RBP13.15□□□□□ -0.3
VCX3A-202ENST00000398729 ULK4Q96C45 1275 aa13.15□□□□□ -0.3
VCX3A-202ENST00000398729 DCUN1D1Q96GG9 259 aa13.15□□□□□ -0.3
VCX3A-202ENST00000398729 FBXO8Q9NRD0 319 aa13.15□□□□□ -0.3
VCX3A-202ENST00000398729 OGFRQ9NZT2 677 aa13.15□□□□□ -0.3
VCX3A-202ENST00000398729 CRLS1Q9UJA2 301 aa13.15□□□□□ -0.3
VCX3A-202ENST00000398729 WDR37Q9Y2I8 494 aa13.15□□□□□ -0.3
VCX3A-202ENST00000398729 KCTD3Q9Y597 815 aa13.15□□□□□ -0.3
VCX3A-202ENST00000398729 HEMK1Q9Y5R4 338 aaPredicted RBP13.15□□□□□ -0.3
VCX3A-202ENST00000398729 SDK2Q58EX2 2172 aa13.15□□□□□ -0.3
VCX3A-202ENST00000398729 KLHL33A6NCF5 533 aa13.14□□□□□ -0.31
VCX3A-202ENST00000398729 MGAT4DA6NG13 374 aa13.14□□□□□ -0.31
VCX3A-202ENST00000398729 TOX3O15405 576 aaPredicted RBP13.14□□□□□ -0.31
VCX3A-202ENST00000398729 PSMD3O43242 534 aa13.14□□□□□ -0.31
VCX3A-202ENST00000398729 KRT86O43790 486 aa13.14□□□□□ -0.31
VCX3A-202ENST00000398729 ANKRD34CP0C6C1 535 aa13.14□□□□□ -0.31
VCX3A-202ENST00000398729 FAM87AP0C7U9 286 aa13.14□□□□□ -0.31
VCX3A-202ENST00000398729 RALBP11234 206 aa13.14□□□□□ -0.31
VCX3A-202ENST00000398729 ITGALP20701 1170 aa13.14□□□□□ -0.31
VCX3A-202ENST00000398729 ZNF140P52738 457 aaPredicted RBP13.14□□□□□ -0.31
VCX3A-202ENST00000398729 TMPRSS15P98073 1019 aa13.14□□□□□ -0.31
VCX3A-202ENST00000398729 NFE2L1Q14494 772 aa13.14□□□□□ -0.31
VCX3A-202ENST00000398729 SEL1L2Q5TEA6 688 aa13.14□□□□□ -0.31
VCX3A-202ENST00000398729 KCTD11Q693B1 232 aa13.14□□□□□ -0.31
VCX3A-202ENST00000398729 DENND5AQ6IQ26 1287 aa13.14□□□□□ -0.31
VCX3A-202ENST00000398729 CEACAM20Q6UY09 585 aa13.14□□□□□ -0.31
VCX3A-202ENST00000398729 DET1Q7L5Y6 550 aa13.14□□□□□ -0.31
VCX3A-202ENST00000398729 SLC35B2Q8TB61 432 aa13.14□□□□□ -0.31
VCX3A-202ENST00000398729 NKD1Q969G9 470 aa13.14□□□□□ -0.31
VCX3A-202ENST00000398729 C9orf72Q96LT7 481 aa13.14□□□□□ -0.31
VCX3A-202ENST00000398729 TGM7Q96PF1 710 aa13.14□□□□□ -0.31
VCX3A-202ENST00000398729 CTRCQ99895 268 aa13.14□□□□□ -0.31
VCX3A-202ENST00000398729 ZPBPQ9BS86 351 aa13.14□□□□□ -0.31
VCX3A-202ENST00000398729 TMEM121Q9BTD3 319 aa13.14□□□□□ -0.31
VCX3A-202ENST00000398729 LRRC40Q9H9A6 602 aa13.14□□□□□ -0.31
VCX3A-202ENST00000398729 PSMD13Q9UNM6 376 aa13.14□□□□□ -0.31
VCX3A-202ENST00000398729 R3HDM2Q9Y2K5 976 aaKnown RBP13.14□□□□□ -0.31
VCX3A-202ENST00000398729 TCRBV7S2A1N4TA0A589 114 aa13.13□□□□□ -0.31
VCX3A-202ENST00000398729 AGAP14A8MT82 685 aa13.13□□□□□ -0.31
VCX3A-202ENST00000398729 CFAP99D6REC4 459 aa13.13□□□□□ -0.31
VCX3A-202ENST00000398729 POLR1CO15160 346 aaPredicted RBP13.13□□□□□ -0.31
VCX3A-202ENST00000398729 CAPN5O15484 640 aaPredicted RBP13.13□□□□□ -0.31
VCX3A-202ENST00000398729 LDB2O43679 373 aa13.13□□□□□ -0.31
VCX3A-202ENST00000398729 RAD1O60671 282 aa13.13□□□□□ -0.31
VCX3A-202ENST00000398729 RASSF9O75901 435 aa13.13□□□□□ -0.31
VCX3A-202ENST00000398729 METTL18O95568 372 aa13.13□□□□□ -0.31
VCX3A-202ENST00000398729 ITGB2P05107 769 aa13.13□□□□□ -0.31
VCX3A-202ENST00000398729 WT1P19544 449 aaPredicted RBP13.13□□□□□ -0.31
VCX3A-202ENST00000398729 CAPZBP47756 277 aa13.13□□□□□ -0.31
VCX3A-202ENST00000398729 XIAPP98170 497 aa13.13□□□□□ -0.31
VCX3A-202ENST00000398729 RPE65Q16518 533 aa13.13□□□□□ -0.31
VCX3A-202ENST00000398729 TBR1Q16650 682 aa13.13□□□□□ -0.31
VCX3A-202ENST00000398729 BCL7AQ4VC05 210 aa13.13□□□□□ -0.31
VCX3A-202ENST00000398729 METRNLQ641Q3 311 aa13.13□□□□□ -0.31
VCX3A-202ENST00000398729 KLHL35Q6PF15 583 aa13.13□□□□□ -0.31
VCX3A-202ENST00000398729 ATG14Q6ZNE5 492 aa13.13□□□□□ -0.31
VCX3A-202ENST00000398729 FAM83HQ6ZRV2 1179 aaPredicted RBP13.13□□□□□ -0.31
VCX3A-202ENST00000398729 SNX20Q7Z614 316 aa13.13□□□□□ -0.31
VCX3A-202ENST00000398729 CACNA2D3Q8IZS8 1091 aa13.13□□□□□ -0.31
VCX3A-202ENST00000398729 BEND7Q8N7W2 519 aaPredicted RBP13.13□□□□□ -0.31
VCX3A-202ENST00000398729 OR2L2Q8NH16 312 aa13.13□□□□□ -0.31
VCX3A-202ENST00000398729 HEXDCQ8WVB3 486 aa13.13□□□□□ -0.31
VCX3A-202ENST00000398729 RSC1A1Q92681 617 aa13.13□□□□□ -0.31
VCX3A-202ENST00000398729 RTP4Q96DX8 246 aa13.13□□□□□ -0.31
VCX3A-202ENST00000398729 ZDHHC12Q96GR4 267 aa13.13□□□□□ -0.31
VCX3A-202ENST00000398729 COPS8Q99627 209 aa13.13□□□□□ -0.31
VCX3A-202ENST00000398729 ACSL5Q9ULC5 683 aa13.13□□□□□ -0.31
VCX3A-202ENST00000398729 GUCA1BQ9UMX6 200 aa13.13□□□□□ -0.31
VCX3A-202ENST00000398729 PCDHGA4Q9Y5G9 962 aa13.13□□□□□ -0.31
VCX3A-202ENST00000398729 UNC79Q9P2D8 2635 aa13.13□□□□□ -0.31
VCX3A-202ENST00000398729 AP2A1O95782 977 aa13.12□□□□□ -0.31
VCX3A-202ENST00000398729 MTHFD1P11586 935 aaKnown RBP13.12□□□□□ -0.31
VCX3A-202ENST00000398729 STIP1P31948 543 aaKnown RBP13.12□□□□□ -0.31
VCX3A-202ENST00000398729 MC4RP32245 332 aa13.12□□□□□ -0.31
VCX3A-202ENST00000398729 LEPRP48357 1165 aaKnown RBP13.12□□□□□ -0.31
VCX3A-202ENST00000398729 GDF10P55107 478 aa13.12□□□□□ -0.31
VCX3A-202ENST00000398729 FOXM1Q08050 763 aa13.12□□□□□ -0.31
VCX3A-202ENST00000398729 PLCL1Q15111 1095 aa13.12□□□□□ -0.31
VCX3A-202ENST00000398729 GPR33Q49SQ1 333 aa13.12□□□□□ -0.31
VCX3A-202ENST00000398729 IRGCQ6NXR0 463 aa13.12□□□□□ -0.31
VCX3A-202ENST00000398729 LINC00523Q86TU6 105 aa13.12□□□□□ -0.31
VCX3A-202ENST00000398729 NLGN4XQ8N0W4 816 aa13.12□□□□□ -0.31
VCX3A-202ENST00000398729 NXPE1Q8N323 547 aa13.12□□□□□ -0.31
VCX3A-202ENST00000398729 NLGN4YQ8NFZ3 816 aaPredicted RBP13.12□□□□□ -0.31
VCX3A-202ENST00000398729 GPR150Q8NGU9 434 aa13.12□□□□□ -0.31
VCX3A-202ENST00000398729 ATG4AQ8WYN0 398 aa13.12□□□□□ -0.31
VCX3A-202ENST00000398729 LINC00615Q96LM1 132 aaPredicted RBP13.12□□□□□ -0.31
VCX3A-202ENST00000398729 FRMD8P1Q9BZ68 369 aaPredicted RBP13.12□□□□□ -0.31
VCX3A-202ENST00000398729 RAB33BQ9H082 229 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms